Misgurnus anguillicaudatus (oriental weatherfish): 129436241
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Entry
129436241 CDS
T09481
Symbol
dhx58
Name
(RefSeq) ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
129436241 (dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
manu04054
]
129436241 (dhx58)
Enzymes [BR:
manu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129436241 (dhx58)
Pattern recognition receptors [BR:
manu04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
129436241 (dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_22
Motif
Other DBs
NCBI-GeneID:
129436241
NCBI-ProteinID:
XP_055050215
LinkDB
All DBs
Position
19:complement(30077452..30084536)
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AA seq
679 aa
AA seq
DB search
MAIDLRPYQEEVVQTALRGENSIIWLPTGGGKTRAAVYVTKRHLETKANAKVAVLVNKVH
LVDQHYEKEFKPLLGKDYKIMPVSGDSDEKDFFGRVVKKSDVVICTAQILENALTNMDEE
KHVELTDFTLLVIDECHHTNKDAVYNKIMSRYVEKKVDKEGNLPQVLGLTASPGTGGNRS
LDKAVEHVLQICANLDSVIVSTKNNKPVLKKVVPRPIKRYDIVEKRHLDPFADHLKLMMS
MIHEFMPPTVSVGLREKGTQEYEADVVELRKTGVLQENRLIAQCALHLRQYNDALLINST
VRMVDAFRLLDDFYKSVENNLLDGTDFFLQGLFEENRVELKLLASNPCFENPKLAELEHV
LVEQFKDKSSRGIIFSKTRRGTHNLLEWVISNPELQRVNIQAGILTGAGTGAQHMTQSEQ
KETIKKFRDGGLNLLISTSVAEEGLDIKECNVVVRYGLLTNEIAQQQASGRARAENSIYS
VVAEEGGRELRRELTNEYLEDLTAKAIEQVQSMNPRDFRLKISELQKTAVMIRIMAEKKM
EERSQRFIPAGVQFLCNGCFTPVCHGDDFRSIENSHRVNINPLFKRYYNVGGQVTLERRF
EDWEPGRVISCSKCGKNWGWEIKYKKVAILPCLKLENFSLNTPEGKCSPKKWKKVPFQVQ
DFDFTKYMEDRLDDLDLDD
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgatcttcgaccgtaccaggaagaggtggtgcagactgctctcagaggagag
aacagcatcatttggctccccacaggtggaggaaaaacccgtgcggctgtctatgtcacc
aagagacacttggagaccaaagccaatgctaaagtggcggtgcttgtcaacaaggtgcac
ctggttgaccagcactatgagaaggaattcaaacctcttcttgggaaagactataagatc
atgcccgtcagcggtgacagcgatgaaaaagacttctttggacgcgtggtcaagaagtca
gacgtggtgatctgcactgctcagatcttggagaacgccctgaccaacatggatgaggag
aaacatgtggagctcacagacttcaccctgctggtcatagacgaatgccaccacacaaat
aaggatgccgtctataacaaaattatgagccgctatgtggaaaagaaagtggataaagaa
ggaaatttgcctcaggttttgggtcttacagcatcacctggtactggaggaaacaggtca
ttggataaagctgttgaacacgtcctgcagatctgtgccaatctggattctgtaattgtg
tccaccaagaataacaaaccagtgctgaaaaaagttgtccccaggccaataaagagatac
gacattgttgaaaaaagacatctggacccgtttgctgaccatctaaagttaatgatgtca
atgattcatgagttcatgccgccaacagtgagtgtgggtctgcgtgagaagggcacccag
gaatatgaagctgatgttgtggaactgcgcaaaacaggtgtactgcaggagaacagattg
atagctcagtgcgctctgcacctgcggcaatacaacgatgctctgctcattaatagcact
gttcgcatggtggacgcgtttcggcttctggatgatttctacaaatcagtggaaaacaac
ttgctggatggcactgacttttttctccaggggctttttgaagagaaccgtgtggagcta
aagctgctggcgtcgaacccctgcttcgaaaaccccaaactggccgagttggaacacgtg
ctggttgaacagtttaaagacaaaagctctcgtgggatcatcttctcaaagacccgcaga
ggaacccacaatcttcttgagtgggttatctcaaaccctgagctgcagagggtcaacatc
caagctggtattctcactggagcgggcacgggtgcacagcacatgacccagagtgaacaa
aaggaaactattaaaaaatttcgagatggaggcctcaacctcctaatttccaccagtgta
gctgaggaaggacttgacattaaggaatgcaacgtggttgtacgttatgggctgttgacc
aatgaaatcgctcagcagcaggccagtgggcgggctcgagctgagaacagcatctactca
gtggttgctgaagaagggggacgtgaactacgcagggaactcaccaatgagtatctggaa
gatctgactgcaaaagctattgaacaagtgcaaagcatgaatcccagggacttcagacta
aagatttcagagcttcagaaaactgctgttatgattcggatcatggctgaaaagaagatg
gaggagagaagtcagcgcttcattcctgctggtgtacagtttctgtgcaacgggtgcttt
actcctgtttgccatggagacgatttcagaagtatagagaattcacaccgtgttaacatc
aatcctctgtttaagaggtattataatgttggtggtcaggtgactttggagagaaggttt
gaagactgggagcctggaagggttatcagctgcagtaaatgtggaaagaactgggggtgg
gagattaaatacaagaaagtggcaatactcccctgtttaaaactagagaatttttcattg
aatactcctgaaggcaaatgttcacctaagaagtggaaaaaagttccttttcaagtgcag
gattttgactttactaaatacatggaagaccgtttagatgatctggacctagacgactaa
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