Misgurnus anguillicaudatus (oriental weatherfish): 129436411
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Entry
129436411 CDS
T09481
Symbol
casc3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03013
Nucleocytoplasmic transport
manu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129436411 (casc3)
03015 mRNA surveillance pathway
129436411 (casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129436411 (casc3)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129436411 (casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
129436411
NCBI-ProteinID:
XP_055050511
LinkDB
All DBs
Position
19:complement(33961313..33970385)
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AA seq
769 aa
AA seq
DB search
MADRRRRRRRASQDSEEEDESASGSESGRASSAGAKARGRDPEPVEQPAERVVAKSDDES
ECESEDGVGEAVLSDYDSADLEENESHTEGGEEEEEGEHFSTEEASRPAAEPKPAADAPV
EELEAEESDGGMKEGKADEKENLAGERQSGDGQAETKLETGPKCLQESTEDPENKSDSKG
SQKLDDDEDRKNPAYIPRKGLFFEHDVRGQTQEEERPKGRHRKLWKDEGRWEHDKFHEDE
QAPKSREELISLYGYDIRNGTGPSEGRSYRSRKPRHGSPNREPRRQRDGERSVRTTWQGP
PPVHRNAPRPVTPQSGSSTAPPAASRPTGRTSTQPPLRSFHSNRAPSAPYRTEGRGYPKP
GLDGPPPRGVRTHPGEGERGPRLKGRGGHSTYADRSQDLLVEDIQSEEDEEGEIPLATTT
YTAHHYKTERERVPSPRKQEPGSVAEGSSAAGQTRESSPPQERPVEKKSYSLARRATRTR
PSDLSKQASLDDSSTTVPQTATSAKGESWQEQTETGTQGGLTGLDQDLARLSLTGQNWAQ
SPPSYLQAEMRGIRGSMHMGGGPPQYGNMEEMGVGGGRAKRYSSQRQRPVPEPAPMHIGV
MEGHYYEPMSFQGPIYAHGENPAALPPQGMLVQPEIHMPHPTHPGHPALHPHQSGGPMPN
PALYAAPPVSMSPGQPPPQQLLPPPFYPPPGVMTFGNTNYPYPAGATLPPMYPNPQAQSQ
VFGGVTYYDTVHQQAQPKRSPPRRSSHPVTVRPPPPEDQSRNPAEEIRS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcgacggagacggcgcgcctctcaggacagcgaggaggaggacgag
tctgcctcgggctccgagagcggtagagcctcctcggccggcgcgaaggctcgcggaaga
gatcccgagccggttgaacagccagcggaacgcgtcgtggccaaaagcgacgatgagtcg
gagtgtgaaagtgaagatggcgtaggtgaagctgtgttatcagactatgacagtgccgat
ctggaggagaatgaatcgcatactgagggaggtgaggaagaggaggagggtgagcatttt
agcaccgaagaggcttcgcggcctgctgcagaacccaaacctgctgcagatgcccctgtg
gaggagctggaggccgaagagagcgatggagggatgaaggaaggtaaagcggacgagaag
gaaaatctggccggagagaggcagagtggtgatggacaggccgaaactaagcttgagacc
ggccctaaatgtttacaggaaagcacagaggaccctgagaataaatcggacagtaaaggc
agccagaagctggacgatgatgaggacaggaagaatccagcctacatccctcgaaaaggg
ctcttttttgagcatgatgtcagaggtcagactcaagaagaagaaaggcctaaaggcaga
cacaggaagttgtggaaggacgaaggtcgttgggaacacgacaagtttcatgaagatgaa
caggcgccaaaatcccgcgaagagcttatttctctttacggttatgacatacgcaatggc
acgggaccaagtgaaggacggtcgtaccgatctcgaaaacccagacatggttcacccaat
cgagagcctaggcgccaacgtgatggcgaaaggtctgttcgtaccacgtggcagggcccc
cctcctgttcatcgcaacgcccctcggcctgttaccccacagtcgggctcgtccactgct
ccccccgcggcttccagacccactggacgaacctcaactcagcctcctctgcgcagtttc
cacagcaatcgagccccatcggccccgtataggacagaaggtcgaggatacccgaagccg
ggtctggacggcccgccgcctcggggtgtgcggactcatcctggagagggtgagaggggc
ccgaggcttaaaggccggggcggtcactccacctatgctgatcgtagccaggatctgctg
gtggaggacattcaaagcgaggaagatgaggagggtgaaattccactggcgacaactaca
tacaccgctcatcactacaagactgaaagagagagggtcccatcgccgcggaaacaggag
ccaggatcggtggcggaaggaagcagcgcggcaggacaaacgcgagaatcgtctcctcct
caagagagaccagtggagaaaaaatcgtactcgcttgcacggagggcgacacgaactcgg
ccgtctgatctcagcaagcaggcatccttagatgattcttcaactacggtgccgcaaacg
gcaacatcggcgaagggcgagtcgtggcaggagcagaccgaaacgggaacgcaaggtgga
ctgacaggacttgaccaagacctggcccgtcttagcctgacgggacagaactgggcccag
agcccaccctcctacctacaggctgagatgaggggtatccgtggttcaatgcacatgggt
ggaggccctccacaatatggaaacatggaggaaatgggtgtcggtggtggccgggcaaag
cggtattcatcacagcgtcagaggccagttcccgaacctgcgcccatgcacataggagtc
atggagggccattattatgaacccatgtctttccagggaccaatctacgcacatggggag
aacccagcagccctcccccctcaaggcatgcttgttcagcccgagatccacatgccgcac
cccactcaccctggacacccagccttacatccgcaccaatcaggaggacccatgcccaat
ccggctctttatgctgctccacccgtatctatgtcacctgggcaaccgcctccgcagcag
ctgctaccaccacccttctatccccctccaggtgtcatgaccttcgggaacaccaactac
ccgtaccccgctggagcaacactacctccaatgtaccccaacccccaggcacagtcgcag
gtctttggtggggtgacgtactatgacacggttcatcagcaagctcagcccaaacgctcc
ccaccccggcggtcttctcatcctgttactgtcagacctccacctcctgaggaccagagc
agaaatccggctgaggagattcgctcctag
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