Misgurnus anguillicaudatus (oriental weatherfish): 129436481
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Entry
129436481 CDS
T09481
Symbol
ddx5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129436481 (ddx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
manu03041
]
129436481 (ddx5)
03009 Ribosome biogenesis [BR:
manu03009
]
129436481 (ddx5)
Enzymes [BR:
manu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129436481 (ddx5)
Spliceosome [BR:
manu03041
]
Complex A
U1 snRNP components
U1 related factors
129436481 (ddx5)
Complex B
129436481 (ddx5)
Ribosome biogenesis [BR:
manu03009
]
Eukaryotic type
Pre-60S particles
Helicases
129436481 (ddx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
129436481
NCBI-ProteinID:
XP_073713666
LinkDB
All DBs
Position
19:complement(35359850..35365753)
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AA seq
614 aa
AA seq
DB search
MPGYSDRDRGGRDRGYSNGPPRFGGSRNGPPPGKKFGNPGDRLRKKHWNLDELPKFEKNF
YRENHDVARRSIQEVDHYRRTKEITVKGRECPKPIVKFTEANFPNYVMDVINKQNWTEPT
PIQSQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLEHGDGPICLVLAPTRE
LAQQVQQVAAEYGKASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTN
LRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYV
QINVGALQLSANHNILQIVDVCNDGEKEDKLLRLLEEIMSEKENKTIIFVETKRRCDDLT
RRMRRDGWPAMGIHGDKSQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVINYDY
PNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHDLVSVLREANQAINPKLIQMAEDR
GGRSRGGRGGGFRDDRRDRHSGGRRDFNSYNQDNRNGDSYGQKKVFNSKPQNGSGSYNSS
NSFNQGYGNNGQSNFSGGQSGGYGNQSYQSQQFNANQGGVQNGMSHPPPQFPFNPPQMPQ
SMPPFPMPPPAFPQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatattcagacagagaccgcggtggccgtgacagaggttacagcaatggaccc
ccacgttttggaggcagcagaaatggaccacctccagggaagaagtttggcaatccaggt
gaccgcctgaggaaaaaacactggaacctggatgaacttcccaagtttgagaagaacttt
tacagggaaaaccatgacgtcgctcgacgatcaattcaagaagttgaccactacagaaga
actaaagagattacagtgaagggaagagaatgtcccaaacccattgtgaagttcactgaa
gcaaattttccaaactacgtaatggatgtcattaacaaacagaactggactgagccaaca
cccatccaatcacagggttggccagtggcacttagtggtaaagacatggttggcattgca
cagaccggatctgggaaaacactttcatacttgctccctgctattgttcacatcaaccat
caaccattcctggagcacggagatggacccatttgtttggtgttagcccccacccgtgaa
ctggcacaacaagtccagcaggtggcggcagagtacggcaaagcttctcgtctcaaatcc
acctgtatctacggaggagctcccaaagggccacaaatccgggatctggagaggggagtt
gaaatctgtatcgccacccctggccgccttatcgatttcctggaggttggaaagacaaat
ctgcgcaggtgcacatatcttgtgctggatgaagccgacagaatgctggacatgggtttc
gaacctcagattagaaaaattgtggaccaaattaggcctgataggcagaccctgatgtgg
agcgctacatggccaaaagaggtgcggcagcttgccgaagactttctcaaagagtatgtg
cagatcaacgttggtgctcttcaactcagcgctaatcacaatatcctacagattgttgat
gtctgcaatgatggagaaaaagaggataagctgctgcgtcttctggaggaaatcatgagc
gaaaaggagaacaagactatcatttttgtagagaccaaaagaaggtgtgatgatctgacc
aggaggatgcgcagggatgggtggcctgcaatgggtatccatggagacaagagccagcag
gaaagagactgggtgcttaatgagtttaaatacggcaaagctcccatcctcattgccaca
gatgttgcctccagaggcctagatgttgaggatgtcaaatttgtcataaactatgactac
cccaacaattccgaggactacattcatcgtatcggccgtacggctcgaagccagaaaact
gggacagcctacactttctttacgcccaacaacatgaaacaggcacacgacctcgtctct
gtcctccgtgaggccaatcaagctattaaccccaaactcatccagatggcagaagacaga
ggaggtcgttcgcggggaggtcgaggtggagggtttagagatgaccgccgcgatcgccac
tctggcggtaggcgggacttcaacagctacaaccaagacaaccgcaacggcgactcttac
ggacaaaagaaggtgtttaacagtaagcctcagaacggatctggaagttacaacagcagt
aacagttttaaccagggttacggtaataatggacagtcaaactttagcggcggccagtct
ggtggttacggtaatcaaagttaccagagccagcagtttaacgccaaccaaggaggcgtt
cagaacggcatgagccacccccctccacagttcccctttaaccccccacagatgccacag
tccatgcccccctttcccatgcccccacctgcgttcccacagtaa
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