Misgurnus anguillicaudatus (oriental weatherfish): 129436504
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Entry
129436504 CDS
T09481
Symbol
smarca4a
Name
(RefSeq) SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4a isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129436504 (smarca4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
manu03021
]
129436504 (smarca4a)
03036 Chromosome and associated proteins [BR:
manu03036
]
129436504 (smarca4a)
Transcription machinery [BR:
manu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129436504 (smarca4a)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
129436504 (smarca4a)
Chromatin remodeling factors
BAF complex
129436504 (smarca4a)
PBAF complex
129436504 (smarca4a)
GBAF(ncBAF) complex
129436504 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
129436504
NCBI-ProteinID:
XP_073713681
LinkDB
All DBs
Position
19:complement(36222332..36242498)
Genome browser
AA seq
1622 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHGMMGPSPGPPSSGHPLPPQG
PSGYPQDGMHQLHKPMEGMHEKGIPEDQRYGQMKGMGMRQGGHSGMGPPPSPMDQHSQGY
PSPLGGSEHAPSPVPANGPPSGPMMPSGPGALPMEGGDPQNRSGGAGGVAGSGPSGGPPN
AGGPGASTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQGMPNMPP
GSGQGAGPPGPGGPGPGGPNYNRPHGMVGPNMPPPGPSGVPPGMQGQPPNGPPKSWPEGP
MVNAATPASGPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPAQPPPMVLHQKQ
NRITPIQKPRGLDPVEILQEREYRLQARIAHRIQDLENLPGSLAGDLRTKANIELKALRL
LNFQRQLRQEVVVCMRRDTALETALNGKAYKRSKRQSLREARITEKLEKQQKIEQERKRR
QKHQEYLNSILQHAKDFKEYHRSITGKMQKVTKAVATYHANTEREQKKENERIEKERMRR
LMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAAQALKDKKKKKKKKKP
ENVEGGAAALGPDGEPLDETSQMSDLPVKVIHVDSGKILTGGDAPRAGQLDAWLEMNPGY
EVAPRSDSEDSGSEEEEDDDEEHPQHSQTSSEDKKKIPDPDSEEVSEVDVRHIIEHAKQD
VDDEYGNSAFARGLQSYYAVAHAVTEKVDRQSSLLVNGQLKQYQIKGLEWLVSLYNNNLN
GILADEMGLGKTIQTIALITYLMEYKRLNGPFLIIVPLSTMSNWVYEFDKWAPSVVKVAY
KGSPAARRAYLPILRSGKFNVLVTTYEYIIKDKQVLAKLRWKYMIVDEGHRMKNHHCKLT
QVLNTHYLAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKV
DLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAK
GVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFSGGIVQGLD
LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDGTTKAED
RGMLLKNFNDPSFQYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIG
QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERKAFLQAILEHE
EQDEEEDEVPDDETVNQMIARSEEEFDHFMRMDLDRRREEARNPKRKPRLMEEDELPTWI
MKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLDEIEEEVRHK
KTTRKRKRDRDLDLPGPATPSSSGRSRDKDRDEDSKKQKKRGRPPAEKLSPNPPVLTKKM
KKIVDAVIKYKDGNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHKYRGLN
DLEKDVMLLCQNAQTFNLEGSLIYEDSIVIQSVFTSVRQKIEKEEESEGEDSEEEEDEPD
EGSESESRSVKVKIKLSRKEKVERGKGRRRTARSSRPKPVVSDDDSEDDQEEERSGSGSD
ED
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccctgacccacctatgggcgggacccctcggccgggcccttctccaggccct
gggccgtctccaggggccatgttagggcctagtcctggaccctcacctggttctgcccac
gggatgatgggccccagccctgggcccccctcctcaggacatcctctacctccacagggc
ccttcaggctacccacaggacggcatgcaccagttgcacaagcccatggaaggcatgcat
gagaaaggcattcctgaagatcagcgttacggtcaaatgaagggaatgggcatgagacag
ggtggacacagtgggatgggaccaccacccagtcctatggaccaacattctcaaggttat
ccctctcctctgggaggttctgaacacgccccaagcccagtacctgctaacgggcctccc
tctggtcccatgatgccgtccggcccaggcgcattgcccatggagggtggcgacccacag
aaccggagcggaggagctggcggggttgctggttcaggacccagtggtggacctcccaat
gcaggtggaccaggggcgtccacaccctttaaccagaaccagctacaccagctgcgggct
cagatcatggcatataaaatgctggcacgtgggcaacctctgcccgatcatttgcagatg
gcagtacaggggaaaaggccaatgccgggtatgcagcaggggatgcccaacatgccccct
ggctccggacaaggagcaggccctcctggaccaggtggccccggacctgggggacccaac
tacaatcgaccacatggaatggttggaccaaatatgcctcctccgggaccttccggtgtt
ccccctggcatgcagggacaacctcccaatggacctccaaaatcatggcctgaagggccc
atggtgaatgctgcaacccctgccagcggaccacaaaagctaatacctcctcagcccaca
ggccgtccctctcccgcacctccttcagttccacccgccgcctcgcccgtcatgccccct
cagacccagtctccagggcagccggcccagcctccccccatggtcctgcatcagaaacag
aaccgcatcacgcccatccaaaagccccgaggcctggatccagtggagatccttcaggaa
agagagtacaggctgcaggctcgaatcgcacatcgtattcaggatctggagaaccttccg
ggttctctagctggtgacttgaggaccaaagccaacatagagctgaaagcactgaggctc
ctaaactttcaaagacagctccgtcaggaagttgtggtgtgcatgcgccgtgacacggct
ctggagacggcactgaacggcaaggcttacaaacgcagcaagaggcagtccctgcgagag
gctcgtatcactgaaaaactggagaaacagcagaagatcgagcaggaacgcaagcgcaga
cagaaacaccaggagtatctcaacagcatcctgcagcatgcaaaggacttcaaggaatac
caccgctccatcaccgggaagatgcagaaggtgaccaaagctgtggccacgtaccacgcc
aacaccgagagggagcagaagaaggagaacgagaggattgagaaggagagaatgaggcga
ctgatggctgaagatgaggagggttacaggaagttgattgaccagaagaaggacaaacgt
ctggcttacttgctgcagcagacggacgagtacgtggccaacctcactgagctcgtcaga
gcccacaaagctgctcaggccctcaaggacaagaagaagaagaagaaaaagaagaagcct
gagaatgtagagggtggagctgcggctctcggtccagatggagagccgctagatgagacc
agtcaaatgagcgacctgcctgtaaaggtgattcacgtggatagtggaaagatcctaaca
ggcggggatgctcctagagctggacaactggatgcttggctggagatgaatccagggtac
gaggtggccccgcggtcagacagtgaagatagtggctcagaggaggaagaggacgatgat
gaagaacacccccagcattctcaaacctcatcagaggacaaaaagaagatcccagatcca
gacagtgaagaagtgtctgaagtagatgtccgtcacatcattgagcacgctaagcaggac
gttgatgatgaatacggtaactctgccttcgcccgcggcctgcagtcgtactacgccgtg
gctcacgccgtcactgagaaggtggacagacagtcatccctgctggtgaacgggcaactc
aaacagtaccagatcaaaggcttggagtggctggtgtctctgtataacaacaacttgaat
ggaattctggctgatgaaatgggtttgggaaaaactatccagaccatcgcactcatcacc
tacctcatggagtacaaacgactgaatgggcccttcctcattatcgttcctctctccaca
atgtccaactgggtgtacgagtttgataaatgggctccttcggtggtgaaagttgcttac
aagggctctccagctgctcgcagagcttaccttcccattttgcgtagcggcaagtttaac
gtgttggtcaccacttacgaatacatcatcaaagacaagcaagtgctggccaagctccgc
tggaagtacatgatcgtggacgaggggcatcgtatgaagaaccatcactgtaaactgact
caggtgttgaacacgcactacctggcgccgcggcgtttgctcctcacaggcacgccactg
cagaacaagctgcccgagctgtgggcgctgcttaacttcctgctgcccaccatctttaag
agctgcagcacctttgagcagtggtttaacgctccgttcgccatgactggagagaaggtg
gacctgaatgaggaagagaccattctgatcatccgtcgtcttcacaaagtgctccgcccc
ttcctgctcaggagactgaagaaggaagtcgaggcccaactgcccgaaaaggtggagtac
gtgatcaagtgtgacatgtcggccctgcaaagagttctgtacagacacatgcaagctaaa
ggagtgctgctcactgacggctcagagaaagacaaaaagggtaaaggaggcactaagact
ctgatgaacactattatgcagctgaggaagatctgtaaccacccttacatgttccagcac
atcgaggagtccttctccgagcacctgggtttttctggaggcatcgtacagggacttgat
ctgtaccgcgcctctggtaaattcgagctgctggatcgtatcctgcctaagctccgcgcc
accaaccacaaagtgctgcttttctgtcagatgacctctctcatgaccatcatggaggac
tacttcgcctaccgaaacttcaaatacctgcgcttggacggaaccactaaggctgaagat
cgtggcatgttgctgaagaactttaatgatccatcctttcaatacttcatcttcttgctg
agtaccagggcaggaggtttgggtttgaatctgcagtctgccgacaccgttatcatcttt
gacagtgactggaatcctcaccaggacttgcaggctcaggatcgagcccatcgtatcggg
cagcagaacgaggtgcgcgtgcttcgtctctgtaccgtgaacagcgtggaggagaagatc
ttggccgctgccaaatacaaactcaacgtggaccaaaaggtcatccaggccggcatgttc
gaccagaagtcctccagccacgagcgcaaagctttcctgcaggccatcctggagcacgag
gaacaggatgaggaggaggatgaggttcctgatgatgagactgtgaaccagatgattgcc
agaagcgaggaagagttcgatcacttcatgcgtatggatctggaccgtcgtcgcgaagag
gctcgcaatcccaagcgcaaacccagactgatggaggaggacgagttgcccacctggatc
atgaaggacgatgcagaagtggagaggctcacctgtgaggaagaggaggagaagatgttc
ggccggggttcccgtcagaggaaggaagtcgactacagcgattcacttacggagaagcag
tggttaaaggctatcgaggaaggaaccctcgatgaaatcgaggaagaggtgcgccacaag
aagaccacccggaagaggaaacgcgaccgtgatcttgaccttccgggcccggccacgccc
agctccagtgggcggagcagagataaggacagggatgaggacagtaagaaacaaaagaaa
cgtggccgccctcctgctgaaaaactctcgcccaaccctccagtactcactaagaagatg
aagaagatcgtggatgctgtaattaaatacaaagatggtaacggaaggcaacttagtgaa
gtgtttattcagctgccgtctcgcaaagagctgccagaatattacgaactcattcgtaaa
cctgtggacttcaggaaaatcaaggagcgtataaggagccacaagtaccgcggcctgaac
gaccttgagaaggacgtcatgctgctctgtcagaacgctcagacctttaacctggaggga
tcactgatctacgaggactccatcgtgatacaatccgtattcaccagcgtgcggcagaag
atcgaaaaagaggaagagagtgagggagaagatagtgaggaggaagaggatgagcctgat
gagggatccgagtctgaatctcgttcagtgaaggtgaagattaagctgagtcgaaaggaa
aaggtggagagagggaagggaaggaggcgaaccgcgcggagctcgcgtcccaaacctgtt
gtcagcgatgacgacagcgaggatgatcaggaagaggagcgttcaggtagtggcagcgat
gaagattaa
DBGET
integrated database retrieval system
