Misgurnus anguillicaudatus (oriental weatherfish): 129437494
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Entry
129437494 CDS
T09481
Symbol
rnf169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
manu04121
]
129437494 (rnf169)
03400 DNA repair and recombination proteins [BR:
manu03400
]
129437494 (rnf169)
Enzymes [BR:
manu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
129437494 (rnf169)
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
129437494 (rnf169)
DNA repair and recombination proteins [BR:
manu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
129437494 (rnf169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf-RING_UBOX
zf-RING_10
zf-RING_2
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
129437494
NCBI-ProteinID:
XP_055051634
LinkDB
All DBs
Position
24:complement(4360063..4370071)
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AA seq
638 aa
AA seq
DB search
MKMAAAGSAKSAGLGQRGKTRPDALSAPLSLEEARCPVCSEILLEPVTMPCGHSVCLHCF
QRTVKLISLCCPLCRLRVSSWARKQSREKSLVNTKLWDLVRLSHPERCKRRMEQRAVETA
DDDIFRAPEPVHKPGEMRQEYEKQKIKGGVSEETEERKKKVPLHRKEECGMLKHCQYPFC
GVSDSENEEPVGKRTRHVSAFVRKTKCSPAFNRGCLHSSAVQRSRSCTDSDDGKGKSRGH
PHHTVPEKACVTYSFNAGILLSSENSRSFSAPVLSLDKKHHWRGLHASSASLMLQTKSER
SISPESNDSISEELNHFKPIVCSPCTPPKRLPDGRLLEPTIVKSTPRNLMRNLHKSTSYE
ASPTILQKWKQIEVDRQCIKVLSKGTVTSPIAEDLSLKLSPVKEQESRPCSCIIAEDSLQ
DHQCSCVASAKKSKNQKDKHVVSNKRRLIFDQCMKEEGTSPASALIRLKTKTVADTSSRD
GHGRCETLCEYGLSEMNEKMFDKRVGRRNKDTVDPENLINEPATSCVLNRPTSRRGKKRS
HKTKHLEEAVQAKISRRDTCNPFDRFDDPIVRRMDQERTDRELALKLQRQFDRECQKVDR
HKTSYELRSWATKDGLVGRNTRRSRRTSKRTEHFNLSS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggcggcggcggggtccgccaaatccgctggactagggcagagaggaaaaaca
aggccagacgctctctctgcaccgctgtctctggaagaagctcggtgcccggtatgctcc
gaaatcctgctggagccggtaacgatgccatgtggacactctgtatgcctgcattgtttc
cagcggacggtgaagttgatcagtctctgctgtccgctgtgccggctgcgagtgtccagc
tgggcccgtaaacagtcccgggagaagagcctggtgaacaccaaactctgggacctggtc
cgcctcagtcacccggagaggtgtaagaggagaatggagcagcgagctgttgagacggcg
gatgatgatatatttcgagcacctgaaccagttcataaacctggagaaatgcggcaagag
tacgaaaaacaaaaaatcaagggtggagtcagtgaagaaactgaagagagaaagaaaaaa
gtccccctacacagaaaggaagaatgcgggatgctaaaacattgtcaatatcctttctgt
ggagtttcagactctgagaatgaagagcccgtgggaaagaggaccagacatgtttctgca
tttgtgagaaaaactaagtgctcccctgccttcaatagaggttgccttcatagcagtgcc
gttcagaggagtaggagctgtacggactcggacgatggcaaaggaaagagcagaggtcac
ccacatcatactgtacctgaaaaggcttgcgtcacttatagtttcaacgctggaatactt
ctgtcctctgaaaacagtcggtctttctctgccccggtacttagcctggataagaagcac
cactggcggggtctacacgcctcttctgcttcactcatgcttcaaaccaaatcagagagg
tccattagcccggaaagcaatgatagcatatcagaagaactcaaccatttcaagcctatc
gtttgctcgccttgcaccccacccaaacgactgcctgacgggcgacttttggaacccacg
attgtgaagtcaacccctaggaatttgatgcgtaatctgcacaagtccacaagctacgag
gccagccctaccatcttgcagaagtggaagcagatcgaagttgaccgtcagtgtatcaag
gtgttatccaagggtaccgtcacaagtccaattgcagaggatcttagccttaaattaagt
cctgttaaagagcaggagagccgaccttgcagttgtattatagccgaggatagcttgcag
gatcatcaatgctcttgtgttgcaagtgcaaaaaagtctaaaaatcagaaggacaaacat
gtagttagtaataagcgacggctcattttcgatcagtgtatgaaagaggaaggtacatcg
ccagctagtgctctcattaggttaaagacaaaaactgttgcagatacttcatcccgagat
gggcacggcagatgtgaaacactttgcgaatacggactatcagagatgaatgaaaagatg
ttcgacaagcgtgtcggacgtcgcaataaagacactgtagaccccgagaacctcataaac
gagcccgctaccagttgtgtacttaacagacctacctcaagacggggcaaaaagagaagc
cacaaaaccaaacatttggaagaggccgtacaggcgaaaatatccaggagggatacttgc
aatcccttcgataggtttgatgatccgatcgtccgaagaatggatcaggaaaggactgac
agagaactagcgctaaagctacaaagacagtttgacagagaatgtcaaaaagtggacaga
cacaagacaagttatgaactacgatcctgggccacaaaagatggattagtcggacgtaat
acacgaagatcaagaagaacctctaaaagaactgagcactttaacttgagttcttaa
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