Misgurnus anguillicaudatus (oriental weatherfish): 129438071
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Entry
129438071 CDS
T09481
Symbol
pafah1b1a
Name
(RefSeq) lissencephaly-1 homolog A
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu00565
Ether lipid metabolism
manu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
129438071 (pafah1b1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
manu03036
]
129438071 (pafah1b1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
manu04147
]
129438071 (pafah1b1a)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129438071 (pafah1b1a)
Exosome [BR:
manu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129438071 (pafah1b1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_EML
Beta-prop_Nup120_160
Beta-prop_DCAF4
Beta-prop_Vps41
WDR90_beta-prop_4th
LisH
Beta-prop_SPT8
WD40_RFWD3
LisH_PAC1
Beta-prop_DCAF12
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
eIF2A
Nucleoporin_N
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_NUP159_NUP214
Pox_A_type_inc
Beta-prop_WDR11_2nd
LisH_2
ARMC9_LisH
DUF2570
SutA-RBD
Motif
Other DBs
NCBI-GeneID:
129438071
NCBI-ProteinID:
XP_055052575
LinkDB
All DBs
Position
24:complement(21830914..21865544)
Genome browser
AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPIGQKRDPKEWIPRPPERYALSGHRSPVTKVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECIAWAPESAHPTILEATGSE
TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLVHPGGKFIVSCADDK
TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcacagaggcaacgtgacgagctaaaccgagcgatagctgattatcttcgt
tccaatggatatgaagaggcctattcagttttcaaaaaggaggcggaactagacatgaat
gaggaattagataagaagtatgcaggccttttggaaaagaaatggacctcagtcatcaga
ttgcagaaaaaggtgatggaattagaatcgaaactgaatgaggcgaaagaagagatcact
ttaggtgggccaattggacagaagcgagaccccaaagaatggatccctcgtccccctgag
cgatatgccctcagcggccataggagtcctgtcaccaaagttattttccatccagtcttc
agtgtcatggtttctgcctcagaggacgcaacaataaaggtatgggactatgaaacaggg
gactttgagcgcacccttaagggccacacggactccgtgcaggacatctcctttgaccat
actggaaagctgctagcctcatgttcagcagacatgaccattaagctttgggatttccag
gggttcgagtgcatcaggaccatgcatggacatgaccataatgtttcatctgtagctatt
atgcccaatggtgatcatatagtttctgcctcaagagataaaaccattaaaatgtgggag
gtggccactgggtactgtgtgaagacattcaccggccacagagagtgggtgcgtatggtg
cggcccaaccaagacgggactctgatcgcaagtagttctaatgaccagacggtgcgtgtt
tgggtggttgcaacaaaagaatgcaaggcagagctaagggagcatgagcatgtggtggag
tgcattgcctgggctcctgaaagcgcccatcccactatcttggaggccaccggctctgag
accaagaaaagtgggaaacctggacctttcctgctgtctggttctcgagacaagaccatt
aagatgtgggacgtgagcactggcatgtgtcttatgaccctggttggccacgataactgg
gtgcgcggagtacttgtgcaccctggagggaagttcattgtgagctgcgctgatgacaaa
actttaaggatctgggactacaaaaacaagcggtgcatgaagaccttgagtgcccatgaa
cattttgttacctctctggatttccacaagactgctccatatgttgtcactggaagcgta
gatcaaacagtaaaagtgtgggagtgtcgctga
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integrated database retrieval system
