Misgurnus anguillicaudatus (oriental weatherfish): 129438077
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Entry
129438077 CDS
T09481
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129438077 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
manu03021
]
129438077 (taf6l)
03036 Chromosome and associated proteins [BR:
manu03036
]
129438077 (taf6l)
Transcription machinery [BR:
manu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129438077 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
129438077 (taf6l)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
129438077 (taf6l)
STAGA complex
129438077 (taf6l)
TFTC complex
129438077 (taf6l)
SAGA complex
129438077 (taf6l)
SLIK complex
129438077 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
129438077
NCBI-ProteinID:
XP_055052589
LinkDB
All DBs
Position
1:18891977..18899792
Genome browser
AA seq
649 aa
AA seq
DB search
MTEREERRFAEVPRESIKLMAESAGVELSEEVAALLAEDVCYRLREATQNSSQFMRHAKR
RKLSVEDFNRALRWSNTETVCGYGAQDSLPFRPLKEGELFFVEDREINLVELALATNIPK
GCAETMVRVHVSYLDGKGNLEPQGTGKRYIYPGSEHPKVPTSVQSLSDDLLKYYQQITRA
ILGEDPHLMKVALLDLQYNSKIAALLPYFVYVISGVKSVSHDLDQLNRLLHMVKSLVQNP
YLYLGSYVRSLVSSVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYH
QILLSLQKVLSDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLPAYWANLQAVLDDYSVS
NAQVKADGHKVYGAILVAVERLLKMKAHSLSTAAEGGSATLEGSVTGAGGFRESSPGLSP
PPEPISEPPLGIASHLQAGGAGCQWEEWTPVSLPAMYCELYSFFGDSLAVRFSTDPPLGG
IPPAAPCQSLDNRKEPASGAANLESTRKMPQLTASMNISPRQDGSPRTEQPPSLAATAPG
RSFARSSSVSRSRSSSSRAGRSSSQSRDIFPKARFPPPQAGLPAFSFIIGGRQMGRRCQG
RRFQTSFIPTPPVTSLPPRVYAHKLPVIGRVSKPVRRWTSSHYSLHLPL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaagggaggaacggcgcttcgctgaggtgccccgcgaatcgattaaactgatg
gccgagagcgcaggagtggagctcagcgaggaggtcgcagctctgctggccgaggatgtg
tgttatcgcctccgagaagcaacacagaacagctcacagttcatgcgacatgctaaaaga
agaaagctgagcgtagaagacttcaacagagcgctgcggtggagcaatactgagaccgtt
tgtggctacggtgcacaagactccttacctttccgaccattaaaggaaggagaactgttc
tttgtagaggatagagagataaacctggtggagttggcgcttgctaccaacatccccaaa
ggctgtgcagagacaatggttcgagtacatgtgtcgtatcttgatgggaaaggcaatctg
gaacctcaaggcacaggaaaaagatacatttatccaggttcagaacatcctaaggtaccc
acttctgttcagtctctatcggatgatctgctgaagtattaccaacaaataactcgagcc
attttaggagaggacccacatcttatgaaggttgctctgctggacctacagtacaattca
aagattgctgccctcctgccttactttgtgtacgtcatcagcggggtaaagtcagtaagt
catgacctagaccagttaaacagacttctacatatggtgaaaagtctggtgcagaacccg
tatctgtacctgggctcgtatgtgcgcagtttggtgtccagtgtcatgtactgcatcttg
gagccactggctgcctccatcaaccctcttaatgaccactggaccctgagagactacgct
gctctgctgctgagccacatcttctggacacatggtgatcttgtaagtggactataccat
cagatcttgctgtcactgcagaaagttctctctgatccagttagacctctctgttcccac
tacggagctgtagtgggtctgcacgctctcggctggaaggctgttgaacgtgtgttgtat
cctcacctccctgcatactgggcaaatttacaagctgtgttagatgattattctgtgtcc
aacgctcaggtgaaagcagatggccacaaagtctatggagccattctggtggcggtagag
cgtttgctaaaaatgaaggcacatagtctatccacggcagctgaaggaggcagtgccact
ctagaaggatctgtcaccggagcaggagggtttcgagaaagctctcctggtctcagccct
cctcccgaacccatttctgaaccccctcttggcattgcaagccatttacaagcaggtgga
gctggttgtcaatgggaagaatggaccccagtctctcttccagccatgtactgtgaactc
tactctttttttggagacagtttggctgtacggtttagcactgacccaccactaggtggc
atcccacctgcagctccctgtcaatcgttagataacaggaaggagccagctagtggcgct
gccaatcttgagagtacacgaaagatgccccaactgactgccagtatgaacatcagccca
cggcaagacggaagcccacgcacagaacaaccaccaagtctggctgctactgccccaggg
aggtctttcgcccgctcatcctcagtctcacgttccagatcctcttcatcccgtgctggg
cgttcaagcagccaatccagagacatttttcccaaagcccgtttcccaccccctcaggcc
ggacttccggccttttctttcattatcggtggacggcagatgggtcgtcgttgccaggga
cgacgcttccagacaagctttattccaaccccacctgttacttcccttccacctcgtgtc
tacgctcacaagttgccggtcataggacgagtcagtaaaccagtgcggcgctggacatct
tcccattactcgcttcacctgccactttag
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