Misgurnus anguillicaudatus (oriental weatherfish): 129438079
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Entry
129438079 CDS
T09481
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04137
Mitophagy - animal
manu04140
Autophagy - animal
manu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129438079 (hif1al)
04137 Mitophagy - animal
129438079 (hif1al)
04148 Efferocytosis
129438079 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manu03000
]
129438079 (hif1al)
Transcription factors [BR:
manu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
129438079 (hif1al)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
129438079
NCBI-ProteinID:
XP_055052587
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All DBs
Position
3:complement(22654330..22671895)
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AA seq
633 aa
AA seq
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MVNSANKRPSLEQRKVRSRDAARCRRSQETEVFYELAHSLPLPRRIASHLDKAAIMRVAL
SYLRMNRLIQSTGSTKTQAHEEVEDPTDGFYQQALAGFVLVLTEEGDMVFLSDSVSKYIG
ITQLELLGQSVYEFVHPCDQDEVRDILTSRPGLTKKNPEKLIEHNFFLRMKSTLTHTGRT
VNIKAATWKVLHCTGHMQTLSSEDESSPPAVSFLTLLCEPIPHPSSVEFPLDSSTFLTRH
NMDLTFTQCDGRVTELVGYQPDDLIGRSAYEFFHALDFDHVTRSLHILFSKGQVYTNHYR
FLAKNGGYVWTKTQATVLYNSRTSQPEAVVCLNFILSGVEQADVVFSLEQTCDKPKVKIE
KLSIMEEEDSDMEESSTAKLYFQMKENPEELMQLAPHSGDAIISLTGGFTEGVELSFCRP
PSPNSVPECPQDFCTPELRKLLSPIFDKPSKSPPAASPDEELPMETDGVERFFAIKPEES
VPVKGLTENIDELDLDMLAPYISMDDDFQLTFLPQCSETATSSPEMLSGTSRKRSLEDDE
EDDIPVLAIRWETRQLSSSIEEDLLLSHNILKNYVSEEFELPPQKRTHLLTDRDPLLGEH
QALCDTAALMRDNFITRPPDLMKPLADTLSSLT
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggtgaactctgctaacaaaaggcccagtttggagcagcggaaggtgcgttcgcgggat
gcggcgcgatgtaggaggagtcaggaaactgaggtgttttatgagctggctcactctttg
ccgcttccacgacgtatcgcatcccacctggacaaagctgccatcatgagggtggcactc
agctatctgcgcatgaaccgtctaatccaatccacagggtccaccaaaacacaggctcat
gaggaggtagaggatcccactgatgggttttatcagcaggcactggcaggcttcgttctg
gtcctgacagaagaaggagacatggtcttcctctcagacagcgtcagcaaatatattggc
ataacgcagctggagctgcttggacagagtgtgtatgaatttgttcatccgtgtgatcaa
gatgaagtgagagacatcctcaccagcagaccaggtctcactaagaaaaacccagagaag
ttgatcgaacacaattttttccttcgaatgaagagcactcttacccacacgggacgaaca
gtgaatatcaaggctgcaacctggaaggttcttcattgcacaggacacatgcagactctc
agcagcgaagatgaaagctcgccccctgctgtcagcttcttgacattgctctgcgagccc
attcctcacccatcaagtgttgaattcccactggacagcagcaccttcctcacacgccat
aatatggatctgactttcacacagtgtgacggacgtgtcactgagcttgttggataccaa
ccagatgatctgattggccggtcggcttatgagttcttccacgctctcgattttgatcat
gtgaccaggagtttacacatcttgttctcgaagggccaggtgtacaccaatcactaccgc
tttttggctaagaatggtggttacgtttggaccaagacccaagccaccgtcctctacaac
agcaggacctctcaacctgaagctgtggtctgcctaaactttatccttagtggggtggag
caagcagacgtggtcttttctttagaacagacctgtgataaaccaaaagtcaaaattgag
aagctgagcataatggaagaagaggactcggatatggaggagagcagcactgccaagctt
tacttccagatgaaggagaaccctgaggagttaatgcagctggcacctcactctggagac
gctattatttccctaacaggtggcttcacagaaggtgtggagttgtccttctgccgtcca
ccaagtcccaacagtgtcccagaatgccctcaggacttctgtacacccgaactccgcaaa
ctcctctcaccgatattcgacaagccatccaaatccccacctgctgcgagccccgatgaa
gagctacctatggagacggatggggtggagaggttcttcgccattaaacctgaggagagc
gtacctgttaaaggactgacagagaacatagatgagcttgatctggacatgctagctcca
tatatctcaatggatgatgacttccaattgaccttcctgccccagtgctccgagacggcc
acatcatctccagaaatgctaagcgggacttcaagaaaacgaagtttggaagatgatgaa
gaggatgacattcctgttctggctatcagatgggagacaagacaattgagcagctccata
gaggaagacctcctgctcagccacaacatactgaaaaactatgtttcggaggaattcgag
ttgcctcctcaaaagcgaactcaccttttgactgatcgagatcctttgctgggcgagcat
caggctttgtgtgatacagcagctctgatgagggataactttatcacccgtccgcctgac
ttaatgaaaccacttgctgacacactgtcatcactcacttga
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