Misgurnus anguillicaudatus (oriental weatherfish): 129438100
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Entry
129438100 CDS
T09481
Symbol
brip1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03440
Homologous recombination
manu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129438100 (brip1)
03460 Fanconi anemia pathway
129438100 (brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manu03400
]
129438100 (brip1)
Enzymes [BR:
manu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129438100 (brip1)
DNA repair and recombination proteins [BR:
manu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
129438100 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
129438100 (brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
ARCH_RTEL1
HBB
Motif
Other DBs
NCBI-GeneID:
129438100
NCBI-ProteinID:
XP_055052626
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All DBs
Position
3:complement(24082761..24124035)
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AA seq
1070 aa
AA seq
DB search
MAAAPVEYTIGGVKINFPCKAYPSQLAMMNSIIRGLNNGQHCLLESPTGSGKSLALLCSA
LAWQQAQFSKEQDANSSSCDKKNDCKKTEVTTPCQCLCHSRAVNGTSSSMASNPLGVNLT
AECTSVQATTPVSKGAVTGDQPKRSTLSSRLSEKFQASLATNSEQDDDFKMDRKRIRTPS
TEQKNSKRRCLERGVIYIDDDEEEEDLERPGPSAHRTMECNSDAWVQPQCCSPVSCSLCP
CGSLKAGQKTVEKAKDNEQDKEGGGRKKIPKIFFGTRTHKQITQIARELKRTLYSSVPMT
ILSSRDHTCVHPEVVPHASRNERCKELLEAKNGRSCRYYHNVNKMRDQSTLQWVHGLHHA
WDIEDLVRLGGKLRSCAYFAARELMQEASIVFCPYNYLLDPLIRESMEINLKEQIVVLDE
AHNIEDCARESASFTLNHAQLLLARDEIDGMVTHNIRREQHRPLLALCCSLSNWVQECSS
ALEERGYETSCKVWTGTEALAIFHGFGITADTFSLLQKHLAAVLEKEERAGLVNGREELV
QVPTISSNTQSMLKSLFMVLEFLFRQNSRFAGDYRVALQQSYTWTTQQDPPDAQGFFARP
NRRRQSTRTKTLVHTLSFWCLNPAVAFSDLSDSVRSIVLTSGTLSPMGSFSSELGIKFSI
QLEASHVISRSQVWVGTVGAGPQGRKLCATFQHAETFAFQDEVGALLLKVCHTVKRGVLC
FLPSYKMLDKLRDRWINTGLWEKLEERKTVITEPRGGGKGDFDELLQTYYEAISGTAANG
GNRDGALLVAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQHAKSRG
LLPGGRWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRTNPNKYITGLSKWVRQLVK
HHDTFSGAMQSLESFSHDQQGAVETFDETQSQAAPPYPVPSLIGSTATSPPPKIIGPYKL
SDPQPPQPTMHTEVQAPNLDSTGLLMQVTKTIYSIHPNQSHHQIGNAMFKQYSLRAVSSP
QLRSAANSGPLSFNLSDQRRCFLRMQIQWTKNRKLCFLWNQSPKLIILLT
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagccccagtggagtacaccataggtggtgtaaaaataaacttcccatgcaaa
gcctatccctctcagctggctatgatgaactcgattattcgtggacttaataatgggcag
cattgtctattggagagcccaactggtagtgggaagagtcttgctcttctgtgttcggcc
ctcgcctggcagcaagcacaattcagtaaggagcaggatgcgaatagcagctcttgtgac
aaaaaaaatgactgtaaaaaaacagaagtgacaactccttgtcagtgtttgtgccatagc
cgagctgttaatggaacttccagcagtatggcatccaaccctcttggggttaatcttact
gctgaatgcacttctgttcaagctacaacccctgtttcaaaaggagcagtcactggtgac
cagccgaaaagatccactttgtcctctcgtctctctgagaaatttcaagcctcccttgcc
actaacagtgaacaagacgatgattttaagatggacaggaagcgcattcgtacaccaagc
acagagcagaagaacagcaaaaggagatgtcttgagcgaggggtcatttatattgatgat
gatgaggaggaggaggatctggagagacctgggccaagtgcacataggaccatggaatgt
aatagtgatgcatgggtacagccacagtgttgttctcctgtgtcttgttctctgtgtcct
tgcggcagcctcaaagcaggacagaaaacggttgaaaaggccaaggacaacgagcaagac
aaagagggaggtggaaggaaaaagatcccaaagatcttttttggcacacgtactcataag
cagataacgcagattgcacgggagctaaaacgaacgctgtactccagcgtgcccatgacc
atcctctccagtcgagaccacacctgcgtccaccccgaagtggtacctcatgccagtcgc
aacgaacgctgcaaggagctgctggaggccaagaatggccggtcatgccggtactaccat
aacgtgaataaaatgcgagatcagagcactttacagtgggtgcatgggctgcaccatgcc
tgggacattgaggatctggtgcgtctcggtggcaagctgcgctcctgtgcgtactttgca
gctcgggaactcatgcaagaggccagcattgtcttctgtccttacaactatctacttgac
cccctcatacgtgagagtatggaaatcaatctaaaggaacagattgtagtgctggatgag
gctcataacattgaagactgtgcccgtgagagtgccagtttcaccctgaatcatgcccag
ctgcttctggcacgagatgagatcgatggaatggtgacgcataatattcgccgcgaacag
cataggcctttactcgccctctgctgcagcctctccaattgggtgcaggaatgctccagt
gccttggaggagcgcgggtatgagacatcatgtaaggtctggacagggacagaggctctt
gctatcttccatggctttggcatcactgcagacacattctcattgctgcagaaacaccta
gcagcagtgctggaaaaggaggaacgggccgggctggtgaatgggagagaggaattggtg
caggttcccaccattagctccaatacgcagtcaatgctcaaaagcctctttatggtgctg
gagttccttttcagacaaaatagcagatttgcaggtgattatcgtgtggcgctccagcaa
agttatacgtggaccacccagcaggacccgcctgacgctcagggtttttttgcaaggccc
aaccgtcgccgacagagcacccgcacaaaaaccttggtgcacacactaagcttttggtgc
ctcaaccctgcagtggcattctcggatctgagcgattcggtgcgcagtattgtgctcacc
tcaggcaccctctcaccaatgggctccttttcttctgaactgggcatcaagttctccatc
caactggaggccagtcatgtcatcagcaggtcacaggtctgggtcggtacagttggtgca
ggcccccaaggtcgtaagctttgtgccacattccagcatgcagagacctttgctttccag
gatgaagtgggggcactgttattgaaagtgtgccacacggtgaaacgtggggtactttgc
ttccttccatcttacaagatgctggataaactcagggaccggtggataaacacaggcctg
tgggagaagctcgaggagcggaagactgtgattacagagccacgcggtggtggcaagggc
gactttgatgagcttctgcagacctactatgaggccatcagtggaacggcagccaacggt
ggaaatcgagatggagctctgctggtagcagtctgcagagggaaagtgagtgagggccta
gacttcactgatgacaacgccagagcggtggtcactatcggcattcctttcccaaatatc
aaagatttgcaggttgaactgaagatgaaatataatgaccagcatgccaaatcaagaggg
cttctgcctggtggtcgctggtatgagattcaagcatatcgggcactaaaccaggcactt
ggaaggtgtatacgccatagaaatgattggggggctctgattctggtagacgaccggttc
aggacaaacccaaacaaatacatcactgggctgtcaaagtgggtgcgtcagctagtgaag
caccatgacaccttctctggcgccatgcagtccttggagtccttctctcatgaccagcag
ggggcagtagagacctttgacgagacacaatctcaggctgcccctccgtaccccgtgccc
tcgctgatcggatccactgctacctcaccccctcctaagataatcggcccctataagcta
tctgaccctcagccaccacaaccgaccatgcacactgaggttcaggctcccaatctggac
agtacaggtcttttgatgcaggtgaccaaaacaatatacagcatccatccgaaccaatcg
catcaccagatagggaacgcaatgttcaaacaatacagtctacgagccgtctcttctcct
caactccggtcagcagccaattcaggacccctatctttcaatctcagcgatcagagaaga
tgctttctcaggatgcaaattcagtggacaaaaaacaggaagttgtgcttcctgtggaac
caaagccccaaactaataatactcctgacttga
DBGET
integrated database retrieval system
