Misgurnus anguillicaudatus (oriental weatherfish): 129438238
Help
Entry
129438238 CDS
T09481
Symbol
brca2
Name
(RefSeq) LOW QUALITY PROTEIN: breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03440
Homologous recombination
manu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129438238 (brca2)
03460 Fanconi anemia pathway
129438238 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
manu04121
]
129438238 (brca2)
03036 Chromosome and associated proteins [BR:
manu03036
]
129438238 (brca2)
03400 DNA repair and recombination proteins [BR:
manu03400
]
129438238 (brca2)
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
129438238 (brca2)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
129438238 (brca2)
DNA repair and recombination proteins [BR:
manu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
129438238 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
129438238 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
Motif
Other DBs
NCBI-GeneID:
129438238
NCBI-ProteinID:
XP_055052858
LinkDB
All DBs
Position
24:26933455..26952508
Genome browser
AA seq
2813 aa
AA seq
DB search
MFEDFFDQFDKELGPLNPSWFEELTARSSRDNGGPDISKDEEEENSIKAPETSAQCSQLF
STPKIFKQHFQSPDSSNEESPYEAADSSPSLFGSGKDTFNRSHRRPSNYFGLMDTPKRSL
AHSSKQISESLGAQINPDLSWTSSFNTPSTLTPTVILPKAEDRPSTASCFKDKDAIFVRK
LFPSLSKASESTSSKIVKLDDTIETIQTEGMGRKPIFSPDASLDTSNLWKQKVPNAIEDG
DVRSTVQSVLDGAEDVLSIFFSNSTSALRRVKSKERNRTKNNSLKDINSTLETDNEVDNE
TLKTDKTHSDEVETKSPPANNDVMQWTPLSLSDSSLNENISSSLALNTGKPNGDTFYSSA
AGRTFLSSAERLRSYPDPNLEGSQCQKSLLDKSPVFTLTKKPRKFVYQVPSSAVSKMGIN
HKTAPPLCLKQAVMANPSMSGDLNESIVVSDDAGHPQTLQQITSHHLDEGLDMTQLSKAF
AEDFTQELTSGGLVDLQGQSNQNVSIVSSTITTHVQKTCEVQPEAESEQKKDFIIQQVIQ
GDHDVSCALADVSMDSANESTVVPPTFEVSRDSGFPTTFSDLDGTVLCSNSKDVFSGFKT
ASNKTISIPNEAIIKAKALLHDAIGDSLIDVTTQHNQKMDAIGIDTTRSLLEQSNSSKHA
LTTCVSNARSNPGLLSSKSVKHSISSCSSPQINELDYETGSKSIITVSDVGPQEPGTLLK
ENLEEESDSSKHKQEFGRVAEIQTVLDNNSTNKADLDTSRDENCPLTASQKADVTELCNL
LEEADSQYEFTQFKPTKFGSDSHTTEKDWDPDILNGIDFDDSFNCDAVKGSHLIKTDASN
INNFVQANKEIDPSPVQTVGADKLCSVSKEFRNGNLPASTTEDNSVDGINNHFSDTNQSH
CFGFKTATGKVISVSETSLNKAKHFFEEHDEKVSYNENNKADTEVLKPEESREQAMVSSA
NTSDCIGKEYISPLHLNQHANAALQDPEVNENLAGDAGTKPNCLDRKTDVVCVYSDGCFG
FSTASGKHLKVSETALEQASKLLNDVDSIEASDTKQLLFHTSGRHDDSMSTTNLQKTKAV
SWRETSININQSDCEEINQVSNVPDISSIKRKNFFQEQKSGSDAEGIFTNICLPNPFQPL
SGHGYGFKTASGKGVRVSAEALEKSKIIFKDCNENIEAGIIEETNDKLDIEILKQTNGFT
IASGSKVVLKEAKAVYEDSALIRGFCEKANKSLDVVMKTCRGDQVHYEEKPSLDRQNPQK
EACETKVKELRKDFEHESISLSSSFGFSTASGRKLSVSAEALQKAKNVLSDSADVAPCTS
GSRKSKQITEMQTDNSSLEKHDGFSTAGGKRVTISAIALQRARNLFNECESIEPENLQHQ
NCKGFVNAKGVIVSEKGCIIEADPDLQSGSKFQNSNGSNGPMSRVSFGCGSSTEEPKGFC
TAGGKKVDISPSALQRAKSLFKDCEEDRLTSEALQNQSNKGFTTASGKHVAVSEKALYEI
KAGFVDFSISHNSPVNKVSCDKGVPSATSGSSDEQVGFCTAGGKKVAISTSALQRAASLF
QDCEEETLASEEPVVPKTESSKDTMDENLKLDQLNKTNYSFSTASGKSVSISKVALEQAT
TLFRDCDAQQVIDTDKQAKSSNTSDLHVADSQSHQELPIILDGFKEEANKTISHPTPTKV
VPNELTQLNLHSLDFKSCTETQQEYSEREAMACAKALLADEDLNEPPPPELMPVANIHST
KSPSVHDLQTQGTVEQNGKRKHQLDTSSTADSCQPPSKRQLLSEFDQAVGCSKSTPKSCP
NGLLKGRRAFRYNIQPNVTPPNRSSVDQKSNDGVQQCSAASVQSKRPVFVPPFQKGVKTK
TSKAQDASKASSGFIPPFKKENKDSTNSNCSIKNSCESKTQAGSCKAMENETTCTTPTTH
SAAQYYGEDNPHADLKPEATISMDNISMKKIDYDERDTDAWQETLQLARDMQDMRLGKKK
RQTVRPLPGKLYLAKTSGVSRIGLRDAVGHKCPVGYTSEELYKHGVLYKVSQINSENAES
FRFDCKEFFKRELLAESGSIQLADGGWLVPDSKGTVGKEEFCRALFDTPGVDPKLISDAW
VFNHYRWIVWKRASMEKSFPELMGSLCLTPEQVLLQLKLRYDVEVDHSHRSSLRRIVERD
DTPAKTLVLCVCGIAKPSQNPEKQVKTDDRSPDAKMESTVLWLTDGWYPIKGLLDLPLSA
MLSKGRLKVGDKVVVNGAELVGCQEACPPLEAPESLMLKISANSTRRARWDTKLGYYRDP
RPFRLPLSSLYAAGGAVSCVDIVVLRSYPTQWMEKMPNGVFIFRNDRAEDREARKHSNSK
HKTMELLISNIQAQFEKEMEGKKKSQGRRRTFSQHEIEALQDGEELYEAMESDPAVENHL
SERQMEAVNKFRCCLEERRQVDLQQRVQMALNEAQEADGGCPDRGVTPVWKLSIIDASDP
QSNSVYTLNIWRPSADLRGLLKEGRRYRTYHLATSEGKKRSGIAQIQLTATKKTLFQDIE
VTPEWLHLHFQPRVCVCFRELQNPQFSSPCGEVDNVGNIFSIVDKQGNSPVLHLVDEKFD
VVSVRLSSSLEQLAIEELIKPQALLALSNVQLRQLSGPVPCLYAGEQTLFSINPKDSHLQ
EAMVHMKSFVQTCKDFFSIAEEKVSDLFPAGSFQCPRTPGVSIPKVNGGVTPQQKGRVFS
PFTPVTKRTPAPTSGDCESKDPKNLKRKRGLVYLSRIPSPPPITPLKTKASPCVNKTFNP
PRKSVTPKPPEKVRDLASRSSHRPSGEEEWVPDEEFVMIDTQALLDGLQEAKC
NT seq
8442 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagatttcttcgatcaatttgacaaagaacttggcccacttaatccctcctgg
tttgaggagttgactgccagatcttctagagataatggaggtcctgacatttcaaaagat
gaggaagaggagaacagcatcaaagcaccggagacatcagctcagtgcagtcagctgttt
tcgacaccaaaaatatttaagcaacattttcagtcccctgattccagtaatgaagaatct
ccttatgaagcagcagactcaagtccttctctgtttggctcaggaaaagacacatttaat
agatcccatcgaagacccagtaattactttggccttatggatacaccaaaaagatctttg
gcacattcatcaaaacaaatatctgagagtcttggggcacaaatcaaccctgacttatcc
tggaccagttcctttaacacaccatcaactttgactcccactgtgatattacctaaagca
gaagaccgaccttcaacagcaagttgctttaaagacaaggatgcaatttttgtgcggaaa
ctgtttccatctctttctaaagcctctgaaagtacttcaagtaagatcgttaaactagat
gataccattgagactatccagactgaaggaatgggaagaaagcccattttctccccagat
gcatctctggacacaagcaatctgtggaaacagaaggtgccaaatgcaatagaggacggg
gacgtgcgcagcacggtgcagagcgttctcgatggtgctgaggacgtattgtccatattt
ttcagcaacagcacatcggctctccgaagggtcaaatctaaagaaaggaacagaacaaaa
aacaattccttaaaagatataaattcaactttagagactgataacgaggtagataatgag
acattaaagacagataaaactcattcagatgaggtggaaactaaaagccctcctgcaaac
aatgacgtcatgcagtggaccccactaagcttatcagactccagcctcaatgaaaatatt
tcttcaagcttggctttgaatactggtaaacccaatggtgacactttttacagcagtgct
gcaggtaggacgtttttaagcagtgctgaaagactccggtcttacccagatcccaatttg
gaaggatctcaatgtcagaagtctttgttggacaaatcacctgttttcacacttactaaa
aagcctaggaagtttgtgtatcaagtcccaagctctgctgtgtcaaaaatgggaattaac
cacaaaacggctccaccactatgtctgaagcaagcggtaatggcaaatccctcaatgtct
ggtgacttgaatgaatcaattgttgtcagtgatgatgcaggccatcctcagacactacag
caaatcacttcccatcatctggatgaagggcttgatatgacacagctttccaaagcattt
gcggaggatttcacacaagaactgacatcaggaggacttgtggatttacaaggacagagt
aatcaaaatgtcagtatagtttcatcaactataaccacccatgtacagaaaacatgtgag
gttcagcctgaagcagagtctgagcagaagaaagatttcatcatccagcaggtcattcag
ggtgatcatgatgtcagctgcgctttagctgatgtatccatggactctgcaaatgagtcg
actgttgttcctccaacatttgaagtcagtcgtgacagtggctttcccaccactttttca
gatttggatggcacggtcttgtgctcaaactctaaggatgttttttctggttttaaaact
gcaagcaacaagaccatatcaataccaaacgaggctataataaaggccaaggctttatta
catgacgctattggggacagtttgattgatgttactacacaacataaccagaaaatggat
gcaataggcatcgatacaaccagatcacttttggaacagtccaactcttccaaacatgca
ttgacaacttgtgttagtaatgctcgatccaatccaggtcttttaagttctaagagcgtt
aaacacagtatttcaagctgctcttcaccgcaaataaatgaattggattatgaaactggt
tcaaagagcattattacggtttcggatgttggtccccaggaacctgggactcttttaaag
gagaatttggaggaagagtctgattcatcaaaacataaacaggaattcggaagagttgca
gaaatacagactgtgttagacaataacagcacaaacaaagctgacttggacaccagtcga
gatgaaaactgcccattgacagcgtcacaaaaggctgatgttacagaattgtgcaatctg
ttggaagaagccgacagtcagtatgaattcactcagttcaaacccacaaagtttggctcg
gacagccacaccactgagaaagattgggaccccgatattctcaacggtattgactttgat
gatagttttaattgtgatgctgtgaaaggaagtcatctaattaagactgatgcctctaac
ataaacaatttcgttcaagcaaacaaagaaattgatccttctccggttcaaactgtgggt
gctgacaaattatgcagcgtatcaaaggaattccgaaatgggaatttgcctgcgtcaaca
actgaagacaattcagttgatggaataaataaccatttcagtgatacaaatcaatcacac
tgttttggttttaaaaccgctacagggaaagttataagcgtctcagaaacaagtttaaac
aaagcaaagcacttttttgaagagcatgatgaaaaggtctcgtataatgaaaacaacaag
gcagatacagaagttctaaagccagaagaatctagagaacaagcaatggtatcttcagct
aatacttctgattgtataggcaaggaatatataagcccccttcatttaaatcaacatgca
aatgcagctcttcaagaccctgaggtaaatgagaacttggcgggagatgcagggactaag
ccgaattgtttagatcgaaaaacagatgttgtctgtgtttactcggatggctgttttgga
tttagtacagctagtggaaaacatctgaaagtatctgaaacggcccttgaacaggcaagc
aaacttcttaatgatgttgacagcattgaggcgtcagacactaagcaactccttttccac
acttctggaagacatgacgactctatgtcaacaactaaccttcagaaaacaaaagctgtt
tcttggcgtgaaacatctataaatataaatcagtcagactgcgaagagataaatcaagta
tctaatgttccggacatttcttccatcaaacgtaagaacttcttccaagaacagaaatct
ggcagtgatgctgaaggaatttttacaaacatttgtctccccaatcctttccagccattg
tcgggccatggttatggctttaaaacagccagtgggaaaggagttagagtttcagctgag
gcacttgaaaagtccaagatcatatttaaagactgcaatgaaaatattgaagctggaata
attgaagaaaccaatgataagctagatattgaaatcctcaaacaaactaatggatttaca
atcgcaagtggttccaaagtggtgcttaaggaggcgaaagctgtgtacgaggactctgct
cttattcgtggattctgtgaaaaagcaaacaaaagtctggatgttgtcatgaaaacatgc
cggggtgatcaagttcattatgaagaaaaaccctctttggaccggcaaaaccctcaaaaa
gaagcatgtgaaacaaaagtgaaagaattaaggaaagactttgaacatgagtcgatttct
cttagtagcagctttggtttcagtacagctagtggtagaaagctatccgtctcagctgaa
gccctccagaaagctaagaatgtgttatccgattcagctgatgttgccccatgtactagt
ggttctagaaagtcaaaacagatcacggaaatgcaaacggataacagttccttagaaaaa
catgatggcttctctacagcaggtgggaagagagtgaccatctctgctattgcattgcag
agagcaagaaatctttttaacgaatgtgaaagtatagaacctgagaatcttcagcaccaa
aactgtaaaggtttcgtcaatgccaaaggtgttattgtgtcagaaaagggatgcattatt
gaggcagatcctgatttacaaagtggaagcaaatttcaaaattccaatggaagcaatggt
cccatgtcaagggtctcgtttggatgtgggagttctacggaagaacctaaaggattctgc
acagcgggcggaaagaaggtggacatatctccttctgcgctacaaagggcaaagagtctc
tttaaagattgtgaagaggatcgtttgacctctgaggctctccaaaaccaaagcaataaa
ggttttaccactgccagtggaaaacatgttgctgtctcagaaaaagcactgtatgagata
aaagcgggttttgttgacttctccatcagtcataactctcctgtgaataaagtctcctgt
gataaaggtgtcccatctgcaactagtggttcctcagatgaacaagtgggattttgtaca
gcaggtgggaagaaggttgcaatatctacttctgcactacagagagccgcaagtctcttt
caagactgtgaagaggaaacattagcatctgaggaacctgttgtacctaaaactgaaagc
tctaaggacactatggatgaaaacctaaagcttgatcaactgaataagacaaattacagt
ttcagcacagctagtggtaaaagtgtttctatatcaaaggttgcccttgagcaagccacc
acactcttcagagattgtgatgcccaacaagttattgacactgataaacaggctaaatcc
tcaaataccagtgatctacacgttgctgactcacaatcacaccaggaacttcccataata
ctggatggattcaaagaagaagcaaacaaaaccatttcacaccctacgccaacaaaagta
gttcctaatgaacttactcaactaaacttgcactctttggattttaagagttgcacagag
acccagcaggagtattctgaacgggaagctatggcatgtgctaaagcattattagcagat
gaagacctaaatgaaccacccccacccgagttgatgccagtagcaaacattcacagcacg
aaaagtccatctgttcatgatctacagacacagggcactgtcgaacaaaatggtaaaaga
aaacatcaactagacaccagcagtacagcagattcatgtcaaccaccttcgaaaagacaa
cttctctcagagtttgaccaggctgttggttgttccaagtccacaccgaaaagctgtcca
aatggacttctaaaaggcagacgtgccttcagatacaacatccagcctaatgtcacacct
ccaaatcggagttctgttgaccaaaagtccaatgatggtgtacagcagtgttctgctgcc
tctgtccaatccaaaaggccagtgtttgtacccccctttcaaaagggtgttaagactaaa
acatcaaaggctcaggatgcctctaaagcgtccagcggttttatcccaccattcaaaaaa
gaaaacaaagacagtactaatagcaattgttcgatcaaaaattcatgtgaatccaaaact
caagctggctcctgtaaagcaatggaaaatgagacgacatgcactacaccaactactcac
agtgctgcacaatattacggtgaggacaatccacatgcggatttgaaaccagaagcaacg
atttcgatggacaacatatctatgaaaaagattgactatgatgagagagatacagatgca
tggcaggagactttgcagctggctagggatatgcaggatatgaggcttggaaagaagaaa
aggcagactgtgcgtcctctgcctggcaaactttaccttgctaaaacatcaggtgtttcc
agaattggactgagagatgctgtgggacacaaatgtccagttgggtacacttcagaggag
ctgtataagcacggagtgctttacaaagtctcgcagataaacagtgaaaatgctgaatcc
tttcgctttgactgtaaagagttttttaagcgtgagctccttgcggagtctggttctatc
cagctggctgatggaggctggttggttccagacagtaagggcactgtaggcaaagaggag
ttttgcagggcgttgtttgacacccccggcgttgatccaaagttgataagcgatgcttgg
gtgttcaaccactaccgttggattgtatggaaacgggcatccatggaaaagtcatttcca
gaattgatgggaagcctgtgtttgactccagagcaagtacttctgcagctgaaattgaga
tatgatgtggaggtggaccacagtcataggtcttctctcagaaggatcgtggagagagat
gacacccccgctaagacattagtgctctgtgtatgtggcattgctaaacccagtcaaaat
ccagagaagcaagtgaaaaccgatgaccgatcgcctgatgcaaaaatggagtcaaccgtc
ctctggctcacagatggctggtaccccatcaaaggccttttggaccttcctctctctgcc
atgctgagcaagggtcgtctaaaagttggcgataaggttgtggtcaatggagcagagttg
gttggctgccaggaagcttgcccacctctggaagctcctgaatctctgatgttaaagatt
tcagcaaacagtacaagaagagctcggtgggacactaagttgggatactatcgtgatccc
cgaccttttagacttccgctttcttcactgtacgctgctggaggtgccgtgagctgtgtg
gacattgtggtgttgagaagttaccccactcagtggatggagaagatgcccaatggtgtc
tttatatttcgcaatgatcgtgcagaagatcgagaggctagaaaacacagcaactcaaag
cacaaaaccatggagctccttatttccaatatacaggcccagttcgaaaaagagatggag
ggcaagaagaaaagccaagggagaaggaggacatttagtcaacatgagattgaagctttg
caggatggggaagagctgtatgaagcaatggagtctgacccagctgttgagaaccaccta
agcgaaaggcagatggaggctgtaaataagttcagatgctgcctggaggaaaggagacag
gtggaccttcagcaacgtgttcagatggctctaaacgaggcacaggaggcagacggcggg
tgccctgatcgaggggtcacccccgtttggaaactcagcatcatagatgccagtgacccg
cagagcaactctgtttacacactgaatatctggcggccgtcagcagacttgcgtggcttg
ttaaaagagggccgcagatacaggacgtatcatcttgccacatcagagggcaaaaaacgc
tcaggcatcgctcagatacagctcactgccactaagaaaacactgtttcaggacattgag
gtgactccagaatggttacatctgcattttcaaccaagggtgtgcgtctgcttcagggag
cttcaaaacccccagtttagctccccctgtggggaggtcgacaatgtgggaaatatcttc
tctatagtggacaaacaaggtaattctccagtactgcaccttgtggatgaaaagttcgac
gtggtctctgtgagactgtctagtagtttggagcagttagctatagaggagcttataaag
ccgcaagcactgcttgccctaagtaacgttcagctacggcagctttctgggcccgtgcca
tgcctgtatgctggagaacaaacactcttctccataaaccccaaggattcccatcttcag
gaagctatggttcatatgaagagttttgtccagacatgcaaggatttttttagcatcgcg
gaggagaaggtgtccgatttattcccggctggctcttttcagtgtccgagaactcctggt
gtgtctattccaaaagttaacggcggggtgactcctcaacagaaaggcagagttttctca
cctttcactccagtgaccaagagaactcctgcacctaccagtggtgactgcgagtccaaa
gaccccaaaaacttaaaaagaaaacgaggtttggtctacctgtcccgcatcccttcccct
ccacccatcacgcctctaaaaaccaaagcttccccctgtgtcaacaagaccttcaatcca
ccgcggaaatctgtgaccccgaagcctccggagaaggtgcgcgacctcgcgtcccggtcc
tcgcaccgtccatcgggagaggaggagtgggtgcctgatgaggagtttgtgatgatagac
acacaggcattactggatggactacaggaagcaaaatgctaa
DBGET
integrated database retrieval system
