Misgurnus anguillicaudatus (oriental weatherfish): 129438238
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Entry
129438238 CDS
T09481
Symbol
brca2
Name
(RefSeq) LOW QUALITY PROTEIN: breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03440
Homologous recombination
manu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129438238 (brca2)
03460 Fanconi anemia pathway
129438238 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
manu04121
]
129438238 (brca2)
03036 Chromosome and associated proteins [BR:
manu03036
]
129438238 (brca2)
03400 DNA repair and recombination proteins [BR:
manu03400
]
129438238 (brca2)
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
129438238 (brca2)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
129438238 (brca2)
DNA repair and recombination proteins [BR:
manu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
129438238 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
129438238 (brca2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
BRC-2_N
Motif
Other DBs
NCBI-GeneID:
129438238
NCBI-ProteinID:
XP_055052858
LinkDB
All DBs
Position
24:26933455..26952508
Genome browser
AA seq
2813 aa
AA seq
DB search
MFEDFFDQFDKELGPLNPSWFEELTARSSRDNGGPDISKDEEEENSIKAPETSAQCSQLF
STPKIFKQHFQSPDSSNEESPYEAADSSPSLFGSGKDTFNRSHRRPSNYFGLMDTPKRSL
AHSSKQISESLGAQINPDLSWTSSFNTPSTLTPTVILPKAEDRPSTASCFKDKDAIFVRK
LFPSLSKASESTSSKIVKLDDTIETIQTEGMGRKPIFSPDASLDTSNLWKQKVPNAIEDG
DVRSTVQSVLDGAEDVLSIFFSNSTSALRRVKSKERNRTKNNSLKDINSTLETDNEVDNE
TLKTDKTHSDEVETKSPPANNDVMQWTPLSLSDSSLNENISSSLALNTGKPNGDTFYSSA
AGRTFLSSAERLRSYPDPNLEGSQCQKSLLDKSPVFTLTKKPRKFVYQVPSSAVSKMGIN
HKTAPPLCLKQAVMANPSMSGDLNESIVVSDDAGHPQTLQQITSHHLDEGLDMTQLSKAF
AEDFTQELTSGGLVDLQGQSNQNVSIVSSTITTHVQKTCEVQPEAESEQKKDFIIQQVIQ
GDHDVSCALADVSMDSANESTVVPPTFEVSRDSGFPTTFSDLDGTVLCSNSKDVFSGFKT
ASNKTISIPNEAIIKAKALLHDAIGDSLIDVTTQHNQKMDAIGIDTTRSLLEQSNSSKHA
LTTCVSNARSNPGLLSSKSVKHSISSCSSPQINELDYETGSKSIITVSDVGPQEPGTLLK
ENLEEESDSSKHKQEFGRVAEIQTVLDNNSTNKADLDTSRDENCPLTASQKADVTELCNL
LEEADSQYEFTQFKPTKFGSDSHTTEKDWDPDILNGIDFDDSFNCDAVKGSHLIKTDASN
INNFVQANKEIDPSPVQTVGADKLCSVSKEFRNGNLPASTTEDNSVDGINNHFSDTNQSH
CFGFKTATGKVISVSETSLNKAKHFFEEHDEKVSYNENNKADTEVLKPEESREQAMVSSA
NTSDCIGKEYISPLHLNQHANAALQDPEVNENLAGDAGTKPNCLDRKTDVVCVYSDGCFG
FSTASGKHLKVSETALEQASKLLNDVDSIEASDTKQLLFHTSGRHDDSMSTTNLQKTKAV
SWRETSININQSDCEEINQVSNVPDISSIKRKNFFQEQKSGSDAEGIFTNICLPNPFQPL
SGHGYGFKTASGKGVRVSAEALEKSKIIFKDCNENIEAGIIEETNDKLDIEILKQTNGFT
IASGSKVVLKEAKAVYEDSALIRGFCEKANKSLDVVMKTCRGDQVHYEEKPSLDRQNPQK
EACETKVKELRKDFEHESISLSSSFGFSTASGRKLSVSAEALQKAKNVLSDSADVAPCTS
GSRKSKQITEMQTDNSSLEKHDGFSTAGGKRVTISAIALQRARNLFNECESIEPENLQHQ
NCKGFVNAKGVIVSEKGCIIEADPDLQSGSKFQNSNGSNGPMSRVSFGCGSSTEEPKGFC
TAGGKKVDISPSALQRAKSLFKDCEEDRLTSEALQNQSNKGFTTASGKHVAVSEKALYEI
KAGFVDFSISHNSPVNKVSCDKGVPSATSGSSDEQVGFCTAGGKKVAISTSALQRAASLF
QDCEEETLASEEPVVPKTESSKDTMDENLKLDQLNKTNYSFSTASGKSVSISKVALEQAT
TLFRDCDAQQVIDTDKQAKSSNTSDLHVADSQSHQELPIILDGFKEEANKTISHPTPTKV
VPNELTQLNLHSLDFKSCTETQQEYSEREAMACAKALLADEDLNEPPPPELMPVANIHST
KSPSVHDLQTQGTVEQNGKRKHQLDTSSTADSCQPPSKRQLLSEFDQAVGCSKSTPKSCP
NGLLKGRRAFRYNIQPNVTPPNRSSVDQKSNDGVQQCSAASVQSKRPVFVPPFQKGVKTK
TSKAQDASKASSGFIPPFKKENKDSTNSNCSIKNSCESKTQAGSCKAMENETTCTTPTTH
SAAQYYGEDNPHADLKPEATISMDNISMKKIDYDERDTDAWQETLQLARDMQDMRLGKKK
RQTVRPLPGKLYLAKTSGVSRIGLRDAVGHKCPVGYTSEELYKHGVLYKVSQINSENAES
FRFDCKEFFKRELLAESGSIQLADGGWLVPDSKGTVGKEEFCRALFDTPGVDPKLISDAW
VFNHYRWIVWKRASMEKSFPELMGSLCLTPEQVLLQLKLRYDVEVDHSHRSSLRRIVERD
DTPAKTLVLCVCGIAKPSQNPEKQVKTDDRSPDAKMESTVLWLTDGWYPIKGLLDLPLSA
MLSKGRLKVGDKVVVNGAELVGCQEACPPLEAPESLMLKISANSTRRARWDTKLGYYRDP
RPFRLPLSSLYAAGGAVSCVDIVVLRSYPTQWMEKMPNGVFIFRNDRAEDREARKHSNSK
HKTMELLISNIQAQFEKEMEGKKKSQGRRRTFSQHEIEALQDGEELYEAMESDPAVENHL
SERQMEAVNKFRCCLEERRQVDLQQRVQMALNEAQEADGGCPDRGVTPVWKLSIIDASDP
QSNSVYTLNIWRPSADLRGLLKEGRRYRTYHLATSEGKKRSGIAQIQLTATKKTLFQDIE
VTPEWLHLHFQPRVCVCFRELQNPQFSSPCGEVDNVGNIFSIVDKQGNSPVLHLVDEKFD
VVSVRLSSSLEQLAIEELIKPQALLALSNVQLRQLSGPVPCLYAGEQTLFSINPKDSHLQ
EAMVHMKSFVQTCKDFFSIAEEKVSDLFPAGSFQCPRTPGVSIPKVNGGVTPQQKGRVFS
PFTPVTKRTPAPTSGDCESKDPKNLKRKRGLVYLSRIPSPPPITPLKTKASPCVNKTFNP
PRKSVTPKPPEKVRDLASRSSHRPSGEEEWVPDEEFVMIDTQALLDGLQEAKC
NT seq
8442 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagatttcttcgatcaatttgacaaagaacttggcccacttaatccctcctgg
tttgaggagttgactgccagatcttctagagataatggaggtcctgacatttcaaaagat
gaggaagaggagaacagcatcaaagcaccggagacatcagctcagtgcagtcagctgttt
tcgacaccaaaaatatttaagcaacattttcagtcccctgattccagtaatgaagaatct
ccttatgaagcagcagactcaagtccttctctgtttggctcaggaaaagacacatttaat
agatcccatcgaagacccagtaattactttggccttatggatacaccaaaaagatctttg
gcacattcatcaaaacaaatatctgagagtcttggggcacaaatcaaccctgacttatcc
tggaccagttcctttaacacaccatcaactttgactcccactgtgatattacctaaagca
gaagaccgaccttcaacagcaagttgctttaaagacaaggatgcaatttttgtgcggaaa
ctgtttccatctctttctaaagcctctgaaagtacttcaagtaagatcgttaaactagat
gataccattgagactatccagactgaaggaatgggaagaaagcccattttctccccagat
gcatctctggacacaagcaatctgtggaaacagaaggtgccaaatgcaatagaggacggg
gacgtgcgcagcacggtgcagagcgttctcgatggtgctgaggacgtattgtccatattt
ttcagcaacagcacatcggctctccgaagggtcaaatctaaagaaaggaacagaacaaaa
aacaattccttaaaagatataaattcaactttagagactgataacgaggtagataatgag
acattaaagacagataaaactcattcagatgaggtggaaactaaaagccctcctgcaaac
aatgacgtcatgcagtggaccccactaagcttatcagactccagcctcaatgaaaatatt
tcttcaagcttggctttgaatactggtaaacccaatggtgacactttttacagcagtgct
gcaggtaggacgtttttaagcagtgctgaaagactccggtcttacccagatcccaatttg
gaaggatctcaatgtcagaagtctttgttggacaaatcacctgttttcacacttactaaa
aagcctaggaagtttgtgtatcaagtcccaagctctgctgtgtcaaaaatgggaattaac
cacaaaacggctccaccactatgtctgaagcaagcggtaatggcaaatccctcaatgtct
ggtgacttgaatgaatcaattgttgtcagtgatgatgcaggccatcctcagacactacag
caaatcacttcccatcatctggatgaagggcttgatatgacacagctttccaaagcattt
gcggaggatttcacacaagaactgacatcaggaggacttgtggatttacaaggacagagt
aatcaaaatgtcagtatagtttcatcaactataaccacccatgtacagaaaacatgtgag
gttcagcctgaagcagagtctgagcagaagaaagatttcatcatccagcaggtcattcag
ggtgatcatgatgtcagctgcgctttagctgatgtatccatggactctgcaaatgagtcg
actgttgttcctccaacatttgaagtcagtcgtgacagtggctttcccaccactttttca
gatttggatggcacggtcttgtgctcaaactctaaggatgttttttctggttttaaaact
gcaagcaacaagaccatatcaataccaaacgaggctataataaaggccaaggctttatta
catgacgctattggggacagtttgattgatgttactacacaacataaccagaaaatggat
gcaataggcatcgatacaaccagatcacttttggaacagtccaactcttccaaacatgca
ttgacaacttgtgttagtaatgctcgatccaatccaggtcttttaagttctaagagcgtt
aaacacagtatttcaagctgctcttcaccgcaaataaatgaattggattatgaaactggt
tcaaagagcattattacggtttcggatgttggtccccaggaacctgggactcttttaaag
gagaatttggaggaagagtctgattcatcaaaacataaacaggaattcggaagagttgca
gaaatacagactgtgttagacaataacagcacaaacaaagctgacttggacaccagtcga
gatgaaaactgcccattgacagcgtcacaaaaggctgatgttacagaattgtgcaatctg
ttggaagaagccgacagtcagtatgaattcactcagttcaaacccacaaagtttggctcg
gacagccacaccactgagaaagattgggaccccgatattctcaacggtattgactttgat
gatagttttaattgtgatgctgtgaaaggaagtcatctaattaagactgatgcctctaac
ataaacaatttcgttcaagcaaacaaagaaattgatccttctccggttcaaactgtgggt
gctgacaaattatgcagcgtatcaaaggaattccgaaatgggaatttgcctgcgtcaaca
actgaagacaattcagttgatggaataaataaccatttcagtgatacaaatcaatcacac
tgttttggttttaaaaccgctacagggaaagttataagcgtctcagaaacaagtttaaac
aaagcaaagcacttttttgaagagcatgatgaaaaggtctcgtataatgaaaacaacaag
gcagatacagaagttctaaagccagaagaatctagagaacaagcaatggtatcttcagct
aatacttctgattgtataggcaaggaatatataagcccccttcatttaaatcaacatgca
aatgcagctcttcaagaccctgaggtaaatgagaacttggcgggagatgcagggactaag
ccgaattgtttagatcgaaaaacagatgttgtctgtgtttactcggatggctgttttgga
tttagtacagctagtggaaaacatctgaaagtatctgaaacggcccttgaacaggcaagc
aaacttcttaatgatgttgacagcattgaggcgtcagacactaagcaactccttttccac
acttctggaagacatgacgactctatgtcaacaactaaccttcagaaaacaaaagctgtt
tcttggcgtgaaacatctataaatataaatcagtcagactgcgaagagataaatcaagta
tctaatgttccggacatttcttccatcaaacgtaagaacttcttccaagaacagaaatct
ggcagtgatgctgaaggaatttttacaaacatttgtctccccaatcctttccagccattg
tcgggccatggttatggctttaaaacagccagtgggaaaggagttagagtttcagctgag
gcacttgaaaagtccaagatcatatttaaagactgcaatgaaaatattgaagctggaata
attgaagaaaccaatgataagctagatattgaaatcctcaaacaaactaatggatttaca
atcgcaagtggttccaaagtggtgcttaaggaggcgaaagctgtgtacgaggactctgct
cttattcgtggattctgtgaaaaagcaaacaaaagtctggatgttgtcatgaaaacatgc
cggggtgatcaagttcattatgaagaaaaaccctctttggaccggcaaaaccctcaaaaa
gaagcatgtgaaacaaaagtgaaagaattaaggaaagactttgaacatgagtcgatttct
cttagtagcagctttggtttcagtacagctagtggtagaaagctatccgtctcagctgaa
gccctccagaaagctaagaatgtgttatccgattcagctgatgttgccccatgtactagt
ggttctagaaagtcaaaacagatcacggaaatgcaaacggataacagttccttagaaaaa
catgatggcttctctacagcaggtgggaagagagtgaccatctctgctattgcattgcag
agagcaagaaatctttttaacgaatgtgaaagtatagaacctgagaatcttcagcaccaa
aactgtaaaggtttcgtcaatgccaaaggtgttattgtgtcagaaaagggatgcattatt
gaggcagatcctgatttacaaagtggaagcaaatttcaaaattccaatggaagcaatggt
cccatgtcaagggtctcgtttggatgtgggagttctacggaagaacctaaaggattctgc
acagcgggcggaaagaaggtggacatatctccttctgcgctacaaagggcaaagagtctc
tttaaagattgtgaagaggatcgtttgacctctgaggctctccaaaaccaaagcaataaa
ggttttaccactgccagtggaaaacatgttgctgtctcagaaaaagcactgtatgagata
aaagcgggttttgttgacttctccatcagtcataactctcctgtgaataaagtctcctgt
gataaaggtgtcccatctgcaactagtggttcctcagatgaacaagtgggattttgtaca
gcaggtgggaagaaggttgcaatatctacttctgcactacagagagccgcaagtctcttt
caagactgtgaagaggaaacattagcatctgaggaacctgttgtacctaaaactgaaagc
tctaaggacactatggatgaaaacctaaagcttgatcaactgaataagacaaattacagt
ttcagcacagctagtggtaaaagtgtttctatatcaaaggttgcccttgagcaagccacc
acactcttcagagattgtgatgcccaacaagttattgacactgataaacaggctaaatcc
tcaaataccagtgatctacacgttgctgactcacaatcacaccaggaacttcccataata
ctggatggattcaaagaagaagcaaacaaaaccatttcacaccctacgccaacaaaagta
gttcctaatgaacttactcaactaaacttgcactctttggattttaagagttgcacagag
acccagcaggagtattctgaacgggaagctatggcatgtgctaaagcattattagcagat
gaagacctaaatgaaccacccccacccgagttgatgccagtagcaaacattcacagcacg
aaaagtccatctgttcatgatctacagacacagggcactgtcgaacaaaatggtaaaaga
aaacatcaactagacaccagcagtacagcagattcatgtcaaccaccttcgaaaagacaa
cttctctcagagtttgaccaggctgttggttgttccaagtccacaccgaaaagctgtcca
aatggacttctaaaaggcagacgtgccttcagatacaacatccagcctaatgtcacacct
ccaaatcggagttctgttgaccaaaagtccaatgatggtgtacagcagtgttctgctgcc
tctgtccaatccaaaaggccagtgtttgtacccccctttcaaaagggtgttaagactaaa
acatcaaaggctcaggatgcctctaaagcgtccagcggttttatcccaccattcaaaaaa
gaaaacaaagacagtactaatagcaattgttcgatcaaaaattcatgtgaatccaaaact
caagctggctcctgtaaagcaatggaaaatgagacgacatgcactacaccaactactcac
agtgctgcacaatattacggtgaggacaatccacatgcggatttgaaaccagaagcaacg
atttcgatggacaacatatctatgaaaaagattgactatgatgagagagatacagatgca
tggcaggagactttgcagctggctagggatatgcaggatatgaggcttggaaagaagaaa
aggcagactgtgcgtcctctgcctggcaaactttaccttgctaaaacatcaggtgtttcc
agaattggactgagagatgctgtgggacacaaatgtccagttgggtacacttcagaggag
ctgtataagcacggagtgctttacaaagtctcgcagataaacagtgaaaatgctgaatcc
tttcgctttgactgtaaagagttttttaagcgtgagctccttgcggagtctggttctatc
cagctggctgatggaggctggttggttccagacagtaagggcactgtaggcaaagaggag
ttttgcagggcgttgtttgacacccccggcgttgatccaaagttgataagcgatgcttgg
gtgttcaaccactaccgttggattgtatggaaacgggcatccatggaaaagtcatttcca
gaattgatgggaagcctgtgtttgactccagagcaagtacttctgcagctgaaattgaga
tatgatgtggaggtggaccacagtcataggtcttctctcagaaggatcgtggagagagat
gacacccccgctaagacattagtgctctgtgtatgtggcattgctaaacccagtcaaaat
ccagagaagcaagtgaaaaccgatgaccgatcgcctgatgcaaaaatggagtcaaccgtc
ctctggctcacagatggctggtaccccatcaaaggccttttggaccttcctctctctgcc
atgctgagcaagggtcgtctaaaagttggcgataaggttgtggtcaatggagcagagttg
gttggctgccaggaagcttgcccacctctggaagctcctgaatctctgatgttaaagatt
tcagcaaacagtacaagaagagctcggtgggacactaagttgggatactatcgtgatccc
cgaccttttagacttccgctttcttcactgtacgctgctggaggtgccgtgagctgtgtg
gacattgtggtgttgagaagttaccccactcagtggatggagaagatgcccaatggtgtc
tttatatttcgcaatgatcgtgcagaagatcgagaggctagaaaacacagcaactcaaag
cacaaaaccatggagctccttatttccaatatacaggcccagttcgaaaaagagatggag
ggcaagaagaaaagccaagggagaaggaggacatttagtcaacatgagattgaagctttg
caggatggggaagagctgtatgaagcaatggagtctgacccagctgttgagaaccaccta
agcgaaaggcagatggaggctgtaaataagttcagatgctgcctggaggaaaggagacag
gtggaccttcagcaacgtgttcagatggctctaaacgaggcacaggaggcagacggcggg
tgccctgatcgaggggtcacccccgtttggaaactcagcatcatagatgccagtgacccg
cagagcaactctgtttacacactgaatatctggcggccgtcagcagacttgcgtggcttg
ttaaaagagggccgcagatacaggacgtatcatcttgccacatcagagggcaaaaaacgc
tcaggcatcgctcagatacagctcactgccactaagaaaacactgtttcaggacattgag
gtgactccagaatggttacatctgcattttcaaccaagggtgtgcgtctgcttcagggag
cttcaaaacccccagtttagctccccctgtggggaggtcgacaatgtgggaaatatcttc
tctatagtggacaaacaaggtaattctccagtactgcaccttgtggatgaaaagttcgac
gtggtctctgtgagactgtctagtagtttggagcagttagctatagaggagcttataaag
ccgcaagcactgcttgccctaagtaacgttcagctacggcagctttctgggcccgtgcca
tgcctgtatgctggagaacaaacactcttctccataaaccccaaggattcccatcttcag
gaagctatggttcatatgaagagttttgtccagacatgcaaggatttttttagcatcgcg
gaggagaaggtgtccgatttattcccggctggctcttttcagtgtccgagaactcctggt
gtgtctattccaaaagttaacggcggggtgactcctcaacagaaaggcagagttttctca
cctttcactccagtgaccaagagaactcctgcacctaccagtggtgactgcgagtccaaa
gaccccaaaaacttaaaaagaaaacgaggtttggtctacctgtcccgcatcccttcccct
ccacccatcacgcctctaaaaaccaaagcttccccctgtgtcaacaagaccttcaatcca
ccgcggaaatctgtgaccccgaagcctccggagaaggtgcgcgacctcgcgtcccggtcc
tcgcaccgtccatcgggagaggaggagtgggtgcctgatgaggagtttgtgatgatagac
acacaggcattactggatggactacaggaagcaaaatgctaa
DBGET
integrated database retrieval system
