Misgurnus anguillicaudatus (oriental weatherfish): 129438695
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Entry
129438695 CDS
T09481
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04136
Autophagy - other
manu04140
Autophagy - animal
manu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129438695 (atg16l1)
04136 Autophagy - other
129438695 (atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129438695 (atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129438695 (atg16l1)
03029 Mitochondrial biogenesis [BR:
manu03029
]
129438695 (atg16l1)
Membrane trafficking [BR:
manu04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
129438695 (atg16l1)
Others
Rab GTPases of specific organelles
Auto phagosome
129438695 (atg16l1)
Mitochondrial biogenesis [BR:
manu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129438695 (atg16l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ATG16
ANAPC4_WD40
NBCH_WD40
eIF2A
Ge1_WD40
Nup160
DUF6212
Leu_zip
Motif
Other DBs
NCBI-GeneID:
129438695
NCBI-ProteinID:
XP_055053508
LinkDB
All DBs
Position
3:44819079..44835542
Genome browser
AA seq
619 aa
AA seq
DB search
MAGRRVECLWKRHVVEQLKQRDRVQRQAFEEIIHQYNRLLEKSDFQAVLSERLQTDKYEQ
HNRHDLSPGADGGRSDALQQEMAQMRIRHQEELTELHKKRGELAQNVIELNNQIQQKDKE
IQSNEAKMLEYQQQIAHLEGECCELRNSLTDLERANQTLRDEYDALQITFSALEEKLRKT
TEDNQELVTRWMAEKSQEANRLNAENEKDTRRRQAKLQKDLADAAKEPLPIEQDDDIEVL
SEEAPKETGDTSPSRQISRTPSKRTSQPLPAGLLDSISNIFGLSDSVHTGFVPSESRRRS
VNSFGTSPEAAEAPSTCTEVRVPSTALHIFDAHDGEVNAVRFSPGSRLLATGGMDRRVKL
WEVISGHCEPKGALTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHS
GKVLSARFLLDNTRIVSGSYDRTLKLWDLRSKVCMKTVFAGSSCNDIACTDQCVMSGHFD
KKIRFWDIRSESIVRELELLGRVTSLDLNHDRTELLTCSRDDLVKIIDLRGNAVRQTFSA
PSFKCGTDFTRVTFSPDGSYVAAGSADGVLHIWNVLTGKLEKTLDKGHSTAINSVSWSAS
GAYVASVEKGSKGVLWSDM
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacgcagagtcgagtgcttatggaaacgtcatgtcgtagagcagctgaagcag
agagacagagttcagcggcaagccttcgaagagattatacatcaatataaccgtttgttg
gagaagtctgattttcaggctgtcctctctgaacgtctccagacggacaaatatgaacag
cacaacagacatgatctcagtccgggggctgatggtggtcgcagtgatgctctgcagcag
gaaatggctcagatgagaatcagacatcaggaggaactgacggagttacacaagaaacgt
ggagagttggcccagaatgtcattgaactaaataaccagattcagcagaaagataaggag
attcagagtaatgaagctaagatgttggagtaccagcagcagatcgctcatttggaaggt
gagtgttgtgaattgcgtaactctctcaccgatctggaacgagccaatcagacgctacga
gacgaatatgacgccctgcagatcactttcagcgctctggaggagaaactacggaaaaca
acggaggacaatcaggagctggtgacgcgctggatggctgagaaatctcaggaggcaaac
agactcaatgcagagaacgagaaagacaccaggcgcagacaggccaaacttcagaaggac
ttagcagacgcagcaaaggagccgcttcccattgagcaagatgatgacatcgaagtgctc
tcagaggaagctcctaaggaaacaggtgatacgtcaccgagcagacagattagtcgcact
cccagtaaacggacgtctcagcctcttcctgccggactgctggactcaatcagtaatata
tttggcctgtctgattctgttcacactggtttcgtcccgtctgagtccagacgacgttct
gtgaattcattcgggacgtctcccgaggcagccgaagcaccgtcgacgtgcaccgaagtc
cgtgtgccctccaccgccctgcacatctttgatgctcatgacggcgaagtaaacgcggtg
aggttcagtcctggatctcgactgctcgccacaggaggaatggaccgcagagtcaaactt
tgggaggtcatatcaggacactgtgaacccaaaggtgctctgaccggcagcaatgcagga
atcaccagtatagagtttgacagtgcgggttcgtatctactggccgcatcgaatgatttc
gccagcagaatctggactgttgatgactacagactgcggcacacgctcacaggacacagt
ggaaaggttttgtctgctcgttttcttctcgacaacactcgaatcgtctctggcagttac
gatcggacgctgaagctctgggacttgcgcagtaaagtctgtatgaagacggtttttgcg
ggctccagctgtaatgatatcgcttgcacagatcaatgcgtcatgagcggacacttcgat
aagaaaattcgtttctgggacatcaggtcggagagtatcgtgcgtgagctggagctgctg
ggccgtgtgacgtctttagacttgaatcacgaccgcaccgagcttctcacctgttcccgc
gatgacctggtgaaaataatcgatttacgcggtaatgctgtgcgacagacgtttagtgct
ccaagttttaagtgtggaactgactttaccagagtaacttttagtcctgatggcagttat
gtagcagcgggttcggcagatggagttctgcacatttggaacgtcctaacaggaaaactt
gagaaaactcttgataaaggtcacagtactgccataaattcggtctcctggtctgcgtcg
ggagcgtacgtggccagcgttgagaaaggcagcaagggcgtgctttggtctgacatgtga
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