Misgurnus anguillicaudatus (oriental weatherfish): 129438695
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Entry
129438695 CDS
T09481
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04136
Autophagy - other
manu04140
Autophagy - animal
manu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129438695 (atg16l1)
04136 Autophagy - other
129438695 (atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129438695 (atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129438695 (atg16l1)
03029 Mitochondrial biogenesis [BR:
manu03029
]
129438695 (atg16l1)
Membrane trafficking [BR:
manu04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
129438695 (atg16l1)
Others
Specific organelles associated proteins
Auto phagosome
129438695 (atg16l1)
Mitochondrial biogenesis [BR:
manu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129438695 (atg16l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
ATG16
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
EIF3I
WDR55
WD40_Gbeta
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_NWD2_C
Beta-prop_ACSF4
Beta-prop_VPS8
Beta-prop_EIPR1
eIF2A
Beta-prop_IFT140_1st
Tricorn_2nd
Ge1_WD40
Beta-prop_SPT8
Beta-prop_DCAF12
DUF6212
Leu_zip
NET2A
CCDC39
Motif
Other DBs
NCBI-GeneID:
129438695
NCBI-ProteinID:
XP_055053508
LinkDB
All DBs
Position
24:40907772..40924584
Genome browser
AA seq
619 aa
AA seq
DB search
MAGRRVECLWKRHVVEQLKQRDRVQRQAFEEIIHQYNRLLEKSDFQAVLSERLQTDKYEQ
HNRHDLSPGADGGRSDALQQEMAQMRIRHQEELTELHKKRGELAQNVIELNNQIQQKDKE
IQSNEAKMLEYQQQIAHLEGECCELRNSLTDLERANQTLRDEYDALQITFSALEEKLRKT
TEDNQELVTRWMAEKSQEANRLNAENEKDTRRRQAKLQKDLADAAKEPLPIEQDDDIEVL
SEEAPKETGDTSPSRQISRTPSKRTSQPLPAGLLDSISNIFGLSDSVHTGFVPSESRRRS
VNSFGTSPEAAEAPSTCTEVRVPSTALHIFDAHDGEVNAVRFSPGSRLLATGGMDRRVKL
WEVISGHCEPKGALTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHS
GKVLSARFLLDNTRIVSGSYDRTLKLWDLRSKVCMKTVFAGSSCNDIACTDQCVMSGHFD
KKIRFWDIRSESIVRELELLGRVTSLDLNHDRTELLTCSRDDLVKIIDLRGNAVRQTFSA
PSFKCGTDFTRVTFSPDGSYVAAGSADGVLHIWNVLTGKLEKTLDKGHSTAINSVSWSAS
GAYVASVEKGSKGVLWSDM
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacgcagagtcgagtgcttatggaaacgtcatgtcgtagagcagctgaagcag
agagacagagttcagcggcaagccttcgaagagattatacatcaatataaccgtttgttg
gagaagtctgattttcaggctgtcctctctgaacgtctccagacggacaaatatgaacag
cacaacagacatgatctcagtccgggggctgatggtggtcgcagtgatgctctgcagcag
gaaatggctcagatgagaatcagacatcaggaggaactgacggagttacacaagaaacgt
ggagagttggcccagaatgtcattgaactaaataaccagattcagcagaaagataaagag
attcagagtaatgaagctaagatgttggagtaccagcagcagatcgctcatttggaaggt
gagtgttgtgaattgcgtaactctctcaccgatctggaacgagccaatcagacgctacga
gacgaatatgacgccctgcagatcactttcagcgctctggaggagaaactacggaaaaca
acggaggacaatcaggagctggtgacgcgctggatggctgagaaatctcaggaggcaaac
agactcaatgcagagaacgagaaagacaccaggcgcagacaggccaaacttcagaaggac
ttagcagacgcagcaaaggagccgcttcccattgagcaagatgatgacatcgaagtgctc
tcagaggaagctcctaaggaaacaggtgatacgtcaccgagcagacagattagtcgcact
ccaagtaaacggacgtctcagcctcttcctgccggactgctggactcaatcagtaatata
tttggcctgtctgattctgttcacactggtttcgtcccgtctgagtccagacgacgttct
gtgaattcattcgggacgtctcccgaggcagccgaagcaccatcgacgtgcaccgaagtc
cgtgtgccctccaccgccctgcacatctttgatgctcatgacggcgaagtaaacgcggtg
aggttcagtcctggatctcgactgctcgccacaggaggaatggaccgcagagtcaaactt
tgggaggtcatatcaggacactgtgaacccaaaggtgctctgaccggcagcaatgcagga
atcaccagtatagagtttgacagtgcgggttcgtatctactggccgcatcgaatgatttc
gcaagcagaatctggaccgttgatgactacagactgcggcacacgctcacaggacacagt
ggaaaggttttgtctgctcgttttcttctcgacaacactcgaatcgtctctggcagttac
gatcggacgctgaagctctgggacttgcgcagtaaagtctgtatgaagacggtttttgcg
ggctccagctgtaatgatatcgcttgcacagatcagtgcgtcatgagcggacacttcgat
aagaaaattcgtttctgggatatcaggtcggagagtatcgtgcgtgagctggagctgctg
ggccgtgtgacgtctttagacttgaatcacgaccgcaccgagcttctcacctgttcccgc
gatgacctggtgaaaataatcgatttacgcggtaatgctgtgcgacagacgtttagtgct
ccaagttttaagtgtggaactgactttaccagagtaacttttagtcctgatggcagttat
gtagcagcgggttcggcagatggagttctgcacatttggaacgtcctaacaggaaaactt
gagaaaactcttgataaaggtcacagtactgccataaattcggtctcctggtctgcgtcg
ggagcgtacgtggccagcgttgagaaaggcagcaagggcgtgctttggtctgatatgtga
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