Misgurnus anguillicaudatus (oriental weatherfish): 129439524
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Entry
129439524 CDS
T09481
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129439524 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
manu04121
]
129439524 (rnf43)
Enzymes [BR:
manu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129439524 (rnf43)
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129439524 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
129439524
NCBI-ProteinID:
XP_055054176
LinkDB
All DBs
Position
22:complement(51883983..52003757)
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AA seq
830 aa
AA seq
DB search
MRVPVRRLAGLWPWLLMAALQVVLGHTGLELAAAVESERSAPKAMIKVTLLKQEPTSRPI
TLEGVFAGGSAGYAEGKLMQSHPLSLCNTSEDERQELAFITIVKLESPESKVPQCQPLLN
KARLALQRGAQAVIFDITDDAGAAQELRDLGLLPRPVVLVKSTDAEELMGLVNKNEEAMV
VIDIMMEAPKWPHYDVGILLTVALAVLAIIMIFAMRFFCRSNRTWDSVHQQTMRAIGRLE
TRTYVSPGCSGSQRSRGALGSSSSSGSGPVCAICLEEFMDGQDLRIISCAHEFHKECVDP
WLLQHRTCPLCMHNIMGKQTHELTSRQPQRSRMPAPPPDHQSQAFLLPHHYSTPHPYPQH
HIPFSMRHHYPRTPSGPLPQLGHCGTSPPLHPRTLRCFPSRPLGASCVYHLTPDGHHGRA
HRPSGHGCRTAGHHFAAPRRPCPRCPPGTQRNASASRVHPTAHHHPHHGGGTHGRQDDGS
CSGASYRTERSGYLADGPASDTSSGSCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSE
YDPFVYGPSKGGTPEGTQRPRSLDSVVNRSGNGPDRNGICSEEQQQQVAVFSHVHFHRHR
HHYYEDGDLGQGPGRGSDADQGASAALAGGPCNVVKDKDCQMQHLSCNCPKADISSRGLE
DKDTSPVSSSGPSVVVTSSSLSSPSPACCHKGSAWPSRRKATGCTLEATAPVVHFHQNLD
LQEDCSLHIHYGQGTGNYCCTSPEVTPALLPVPLILDSTGMGDWPCCGGAHVVWQKRMQP
ARSDPQLPSSGSTSDRPLCRAHHNPGHELPRDICLYCQALHSSQEEESGV
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgagggttcctgtgcggcgactggccgggctctggccgtggctgctcatggccgcctta
caggtggtgttgggccacactgggttggaactagctgctgccgttgagtcggaaagatct
gcgcccaaagccatgatcaaggtgaccctactgaagcaggaacccaccagcaggcccatc
acgctggaaggagttttcgccggtggcagtgccggctatgccgaggggaaactgatgcag
tctcacccgttgtctctgtgtaacaccagtgaggatgagcgacaggagttggccttcatc
accattgtcaaactggagagtccagaaagtaaagtgccacagtgtcagccactgctcaat
aaagcccggttggctcttcagagaggggctcaggcggtcatctttgatataacagatgat
gccggtgctgctcaagagcttcgtgatttgggtttgttgccgcggccagtcgtgttggtg
aagtcgacagacgctgaggaactgatgggactcgtcaacaagaacgaggaagccatggtg
gtgatagacatcatgatggaggctcctaaatggcctcactatgatgttggcattctcctg
accgttgctctggctgtgttggccatcatcatgatctttgccatgcgctttttctgcagg
tccaacagaacctgggactctgtgcatcagcagaccatgcgggccatcggcaggctggag
acgcggacgtacgtctctccgggctgcagcggatcccagcgttcacgtggagctctgggg
tcaagcagcagttctgggtctggtcctgtctgtgccatctgtctcgaggagttcatggat
ggccaggatttaaggatcatctcctgtgctcatgagtttcataaggagtgtgtcgacccc
tggctcttacagcaccgaacctgcccgctgtgcatgcataacatcatgggtaaacagact
catgagttgacatcccgccagccccaaagaagccgcatgccagcccctccaccggaccat
cagagtcaagctttccttcttcctcatcattattcaaccccacatccttaccctcagcac
cacatccccttctccatgcgacatcattacccccgcacaccatctggacctttaccccaa
ctgggtcactgtggtacctcaccccctctccatccacgcaccctgcgatgctttcctagc
agaccgttaggtgccagttgcgtgtaccacctcaccccagatggccatcacggacgcgcg
cacaggccaagcgggcacgggtgtcggaccgcggggcatcactttgccgcccccagacgt
ccgtgtccccgttgccccccaggtacccagaggaacgcttcggcttctcgggtgcatccc
acggcccaccatcaccctcatcacgggggaggtacacatggtcggcaggacgatggcagc
tgctcgggagcgagttatcgcacggagcgcagcggttaccttgcagacggtccggccagt
gataccagctcgggatcgtgccacggctcgtccagcgactcggtactgaattgtacggat
gttagccttcagggcgtctacggcagctggtctaccttccgcagttcgctcagcagtgag
tatgacccgtttgtgtacgggccgagcaaaggaggaaccccagagggcacccagaggcct
cggtccctggactcggtagtgaaccgctcgggaaacggacctgataggaacgggatttgc
tcggaggagcagcaacagcaggtggctgttttcagtcatgtccactttcatagacataga
caccactattatgaggatggagacctcggtcaagggcccggccggggctctgacgcggat
cagggagcctcagccgcactagcgggtggcccctgtaatgtagttaaagacaaagactgc
caaatgcagcacctatcttgcaactgtcccaaagcggacatcagttcgagggggctcgag
gacaaagacacaagtcctgtgtcctcatcgggcccctctgtggtcgtaacctcttcctct
ttatcttctccgtcgccagcttgttgccacaagggctcggcgtggcccagcagacggaaa
gcaaccggctgtacgttggaagcgactgcgccggttgtacatttccatcaaaacttggac
cttcaagaggattgtagccttcacattcactacggacaggggacgggaaactattgctgc
acatctccggaagtgacccccgctctcttgccggttcccctgattttggactcaacgggg
atgggcgattggccatgctgtggcggggctcatgttgtgtggcagaagcgcatgcagccg
gcccgttcagatcctcagcttccaagctcgggctctacatcggacagacccctatgtagg
gctcatcacaacccaggccatgaacttcctagggacatctgtctgtactgccaagcttta
catagtagtcaggaggaagagtctggcgtatga
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