Misgurnus anguillicaudatus (oriental weatherfish): 129439695
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Entry
129439695 CDS
T09481
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03030
DNA replication
manu03410
Base excision repair
manu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129439695 (pole)
03410 Base excision repair
129439695 (pole)
03420 Nucleotide excision repair
129439695 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
manu03032
]
129439695 (pole)
03400 DNA repair and recombination proteins [BR:
manu03400
]
129439695 (pole)
Enzymes [BR:
manu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
129439695 (pole)
DNA replication proteins [BR:
manu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
129439695 (pole)
DNA repair and recombination proteins [BR:
manu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
129439695 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
CENP-B_dimeris
APP_N
Motif
Other DBs
NCBI-GeneID:
129439695
NCBI-ProteinID:
XP_055054423
LinkDB
All DBs
Position
22:complement(47108645..47156034)
Genome browser
AA seq
2287 aa
AA seq
DB search
MVLQNSGRYKSDRGGGDQDNQQDDASAMSAVKRLERSQFTDTMDERFGFERMKEPGEKTG
WLINMHPTEILDDDKRMISAVDYYFIQEDGNRFKVALPYKPYFYVATKKNCEREVISFLS
KKFQGKVAKLEIVPKEDLDLPNHLVGLKRNYIKLSFNTLDDLMKVKREISPAVRKNRERE
KSNDAYTSMLSSALVGGSVVTEDEVVSSKKMTEQLDNIVDMREYDVPYHVRVAIDLKIHV
AHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGFLITNREIVSEDIEDFEFTPKPEYEGPFTIFNEPDEASLIQRWFEHIHETKPTIFV
TYNGDFFDWPFVETRAAQHGLNMYREIGFQKDNQGEYKASQAIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLSYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHVNIVFPNKQEQVFNKLTEDGHVLDSETYV
GGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTLRHAIEEEENIPLEQVTNFNEVC
EEIKRKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ANCQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGPPRAFHALNREEQARHEK
KRLGDYCRKAYKKVHLTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
SAQDSGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVIKSTNEKKPKVTISYPGAMLNIM
VKEGFTNHQYQELVDSASLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSK
AANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVI
SRKPEGSPVTERAIPLAIFQAEESVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGSA
IQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAQQTL
TAGDTPDMEDFGAPQRPLQPAILISTKRKRISQGGDSQAESQEQELTQSWREILGSPPSM
GNSREEILVWLRYHKKKWELQLRQRKERRKRRRLVDGESQPTGGGVIRDGPTTGLGSFLR
RTARSILDMPWQIVQIAETNHPGLFKLWAVIGSDLHCMKLNIPRVFYVNQRVPKQEETAT
CKKVNRILPRSSVVYFLYQYTVPEDMYQEHINEINAELSAPDIEGVYETQVPLLFRSLVQ
LGCMCMVNKQVVRDLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHIYLYHHSQGHKALF
GLFIPSQRKASIFVLDTVRSNQMPNLNTLYSTERTALLEKTTEDLLPPEKHLFEVRAEND
IKAIYRALQRILLNYKEERRGPTLIAVQSNWDRRRLAAGMTVLEEFPVVPVHVMDEISYN
VLDWQRHGARRMIKHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRKH
NHLLWLSPTARPDLGGKEADDSRLVMESDERGSMEINSQGCYSTVCVELDIQSLAVNTIL
QSQHVNDMEGGASMGVSFDVIQHASLEEMMSGNQTANAVASYDETALCSNTFRILKSMVV
GWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLNMMKKIFLQLVAEFKRLG
SSVIYGNFNRLILCTKKRSINDAIAYVEYITNSIHSREIFHSLSITFSRCWEFLLWMDPA
NCGGVKGKLPSSLHYGEDGNETSKKKARAEDDGSEDEDDEEENKGEDEEQDGDGEDVEDL
IESNWNIMQYLPQTASCQKYFLMIISAYIAAVYHSMRQELRRNAPGATPIKRRGGSQVSQ
QPTGDVSALPGLITFSQEYVSSELTQNFFTITQKIQKKVSSTRSVTLPSEMFPVLPGSHL
LLNNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEDAQFRDPCKSYVLPE
VICHQCNFCRDLDLCKDPAVAQDGSVLPQWFCSNCQAQYETESIEMALVEALQKKLMSYT
LQDLECTKCKGVKEANMTLYCRCAGDFTLTFTTKSFSEQVEVFRNIAAHYNMNFLLETID
WVLGMNT
NT seq
6864 nt
NT seq
+upstream
nt +downstream
nt
atggttttacaaaacagtggacgatataaatcagaccgaggaggaggagatcaggacaac
cagcaggatgatgcatcggccatgtccgctgtcaagcggctggagcgcagtcagttcacc
gatacaatggacgagcgcttcggctttgaacgaatgaaggagcccggtgagaagaccggc
tggctgatcaacatgcacccaactgaaattctggacgatgacaagagaatgatcagcgct
gttgactattacttcatacaggaggatggaaacagatttaaggttgccctaccctataag
ccatatttttatgtagcaactaaaaagaactgtgagagagaggtcatctccttcctgtca
aagaagttccaagggaaagtggcaaagctcgaaattgtccctaaggaagatttagatttg
ccaaatcatcttgtgggactgaagagaaactacatcaaactgtccttcaacacactggat
gacctcatgaaagtgaaacgagagatctcgcctgctgtccgtaagaacagggaaagagag
aagtccaatgatgcttataccagcatgttatccagtgctctggttggtgggagtgttgtg
acggaggatgaagttgtttcctcaaagaagatgactgagcagctcgacaacatcgtagat
atgcgagaatatgatgtgccttatcacgttcgtgtagccattgaccttaagattcatgtg
gctcactggtataatgtacggtacagaggaagtgcttatcctcctgagattgtgcgcagg
gatgatcttgtggaaagacctgatcctgttgttttggccttcgatattgagaccaccaag
cttccactaaagttccctgatgctgaaacggaccagatcatgatgatctcatacatgata
gatggacagggctttctcatcacaaacagagaaattgtctcagaggacattgaagatttt
gagttcaccccaaaacctgagtatgagggtcccttcactatatttaatgaacctgatgag
gcatctctcatccagagatggtttgaacacatccatgagaccaagcccaccatctttgtc
acttacaatggagacttctttgactggccttttgtggagactcgggcggcccagcacggc
ctgaatatgtatcgagagattggcttccagaaggacaatcagggggagtataaagccagc
caggccattcatatggactgcctcaggtgggtaaaaagagacagttacctgcctgtagga
agtcataatctgaaggctgcagcgaaagccaagttaagttatgaccccgttgagctggac
ccagaggagatgtgccgcatggctactgaagaaccgcagactctggccacctactctgtg
tctgacgctgtggccacatattacctttacatgaaatatgttcatcccttcatttttgcc
ctttgcaccattatacctatggaacctgatgaggtattgcggaaaggttctgggaccctg
tgtgaagccctgctgatggttcaggcgttccacgtcaacatcgtcttcccaaacaaacag
gagcaggtgtttaacaagctgacagaggacggtcatgttctcgactctgagacgtacgtt
ggcggccacgtagaggctctggaatctggagttttccgcagcgacattccctgccgtttt
aaaatgaatccagctgcatttgacttcttgcttcagagggtggagagaactcttcgtcac
gccattgaggaagaggagaatattcctctcgagcaggtcaccaactttaatgaggtgtgt
gaggagataaagaggaagctgatatctctaaaggaagtgcccaacagaatcgagtgccct
cttatttaccatctggatgtaggggccatgtaccccaatatcatcctcaccaacaggcta
cagccctctgcaatggtggatgaagcgacgtgtgctgcttgtgattttaataagccgggt
gcaaactgtcagcgcagaatgacatggcagtggagaggcgagataatgccagccagtcgg
agtgagtttcatcgcattcagcaacagctggagtctgagaaattcccacctctctttcct
aacggtcctccccgtgctttccacgcgctcaatcgagaggaacaggcacgacatgaaaag
aagcgattgggagactactgcagaaaagcgtacaagaaagttcatctgaccagactggag
gaaagagtcactaccatctgtcaaagagagaactcattttacgtcgacacggttcgagct
ttcagagaccggcgatatgagttcaaaggacttcacaaggtctggaagaagaagctgtct
tcagctcaggatagcggtgacgcagcagaggtgaagcgctgtaagaacatggagattctc
tacgagtctctgcaactggcacacaaatgcattcttaactctttctacggatacgtcatg
agaaaaggggctcgctggtactcgatggagatggcagggatcgtgtgtttcactggagcc
aacattatcactcaggccagagagttaattgagcagatcgggagacctctggagctggac
actgatggtatctggtgcgtccttcccaacacctttcctgagaattttgtcatcaagtct
accaatgagaagaaacctaaagtgaccattagttatccaggagccatgctcaatatcatg
gtcaaggagggctttaccaatcatcaataccaggagctggtggactcagcatctctaaca
tatgagaccagagctgagaacagcatcttctttgaggtcgatgggccatacctggctatg
atcctacctgcctctaaagaagaaggcaagaagctgaagaagagatacgcagtgtttaat
gaggatggatcgctggctgaactgaagggttttgaggtgaagagaagaggtgaacttcag
ctcatcaagatctttcagtcttctgtgtttgaggcttttctgaaaggcacaacgctagaa
gaggtgtacgcgtctgtggctaaagtggccgactactggctcgatgtactgtacagcaag
gctgctaacatgccagatgccgagttgttcgagctcatttcggaaaaccgctcaatgtcc
cgtaaactggaagattacggtgaacagaaatccacgtctatcagtacggccaagcgtctt
gcagagtttctcggagatcagatggttaaagacgccggcctcagctgtcgatatgtcatc
tctcgcaagccagagggctcgcctgttacagagagggcgatccctttggccattttccag
gctgaggaaagtgttaaaaagcattttcttcgcaaatggctgaagatgcccagccttcat
gatctggacattagatctattctggactggagttactacattgagcgattaggtagtgcc
attcaaaagattatcactatccctgcagctcttcaacaggttaaaaaccccgtacccaga
gttcgccatccagactggcttcataagaaacttctggaaaagaatgacatctacaagcag
aagaagatcagcgagctttttaccagcgaaggaaagagacaggtggctcagcaaactctt
acagcaggtgatactcctgatatggaggattttggggctcctcagcgccccctgcagccc
gccatactcatcagcactaagaggaagaggatttctcagggaggggacagtcaggccgag
tctcaagagcaggagctcactcagtcttggagagaaatacttggatcaccgccatcgatg
ggtaacagtcgggaggaaattcttgtctggctccgttaccataagaaaaaatgggagctg
cagcttcggcagagaaaggaacgtcgtaagcgacgacggttggttgatggagaatctcag
ccaacaggaggcggcgtaatccgtgatggaccgacaacggggctcggtagctttttgcga
agaaccgcccgcagtattctagacatgccctggcaaattgttcagattgcagagaccaat
cacccgggcctgtttaagttatgggccgtcattggcagtgatctccactgcatgaaactc
aacatcccacgagtgttttatgtcaaccaaagagtgcccaagcaagaagagacggctacc
tgcaaaaaggtaaaccggatacttccacggtcaagcgtggtgtattttctgtaccagtac
acggttcctgaggacatgtaccaggaacacatcaatgagatcaacgctgaactctctgca
cctgatattgagggtgtctatgagactcaggttccactgcttttccggtcactggtccag
cttggctgcatgtgtatggtcaacaaacaggtggtcagagacctggctggcagagaggca
gatacgttcgatctggaacatctagagatgagatctctggcccagttcagctaccttgag
ccaggcagcgtaaggcacatctacttgtaccatcacagtcagggtcataaagctttgttt
ggtctgttcataccctcccaacgcaaagccagcatctttgttctagacacggtgcgtagt
aatcagatgccaaacctgaatacgctgtacagcacggagcgcaccgcattgctggagaag
accacagaagaccttctgcctcctgaaaaacatctgtttgaagtccgtgctgaaaacgac
ataaaagcgatttaccgtgcgctgcaacgcattctgttaaactacaaggaggaacgtcgt
gggccgaccctgattgctgttcagtctaactgggatcgccggcgactggctgcgggtatg
actgtcctggaggagtttccggtggtgccggttcacgttatggatgagataagctacaat
gttctggactggcagcgccacggggctcgtcgtatgatcaaacactaccttaatctggac
agctgcctctcacaggcttttgatatggccaggtattatcacttacctgtaggaaacctg
cctcaggacgtttctatatttgggtcggatctatttctcgcacgtcatttgagaaagcac
aaccacctgctgtggctgtcacctacggcacggccggacctcggggggaaagaggctgac
gacagcagactggtgatggagagtgatgagagagggtccatggagatcaacagtcagggc
tgctactctacagtatgtgtggagttggatattcagagtttggcggtcaacaccattctg
cagtcccagcatgtgaacgacatggagggcggggccagcatgggcgtcagctttgatgtc
attcagcacgcgtcactggaggaaatgatgtcaggaaatcagacagcaaatgcagtggcc
agctatgacgagaccgcgctctgctctaacacgttcaggattctgaagagcatggttgtg
ggatgggttcgagagatcacgcagtatcataacgtctacgctgataatcaggtcatgcat
ttttaccgctggctgcgatctccgagttcactactgtacgacccggcgctgcatcgcacc
cttctcaacatgatgaagaaaatctttttacagcttgtggcagagttcaagcgtctggga
tcgtctgtgatctatggaaacttcaatcgtctcattctctgcaccaagaaacgaagcatt
aatgacgccattgcatacgtggagtacatcactaacagcatacactcacgggagatcttt
cactctctgtccatcacattctcacgctgttgggaatttctgctgtggatggatcccgct
aactgtggaggagtgaaggggaaactgccttcaagtcttcactacggagaggatggcaat
gaaacaagcaaaaagaaagctagagcggaagatgatggaagcgaggatgaggatgatgaa
gaagaaaacaagggagaagatgaggaacaggatggtgacggagaagatgtcgaagacttg
attgaaagtaactggaacatcatgcagtaccttcctcagacagcgtcttgtcagaaatac
ttcctcatgatcatctcggcctatattgctgctgtctatcatagcatgaggcaggagctt
cggaggaacgcccctggtgccacgcccataaagaggcggggtgggtcccaggtatcccaa
cagcccactggggatgtcagtgcacttcctggtttaattacgttctcccaggagtacgtg
tcaagcgaactgacacagaacttcttcaccatcacgcagaagattcagaagaaggtgtcg
agcacccgaagtgtcactctcccatctgagatgtttcccgttcttcctggttcccacctg
ctccttaataaccccgcgctggagttcatcaaatacgtctgccaggtgctttctctggat
gctaacatcgtcaaccaggttaacaagttgaagcgtgatctattgcgattggtcgacgtt
ggagaattctcagaggacgcacagtttcgtgatccctgcaagtcttacgtcctacctgag
gtcatctgccaccagtgtaacttctgccgtgacctcgacctctgcaaagaccctgcggta
gcccaggatggttcggttcttcctcagtggttttgttcgaattgtcaggcccagtatgaa
accgagtctatagaaatggccctggtggaggcgctacagaagaaactcatgagttacacg
ctacaagacctggaatgtaccaaatgcaaaggggtgaaagaagcaaacatgacgctgtac
tgcagatgtgctggggattttactctcaccttcaccacaaagagcttctccgagcaggtg
gaggtgttcaggaacatcgccgctcactataacatgaactttctgctggaaactattgac
tgggtacttggtatgaacacatag
DBGET
integrated database retrieval system
