Misgurnus anguillicaudatus (oriental weatherfish): 129439916
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Entry
129439916 CDS
T09481
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129439916 (zc3h12b)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
129439916 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
KH_N4BP1_1st
TNFR_ELAPOR1_6th
UBA_N4BP1_C
zf-CCCH_4
CobT
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
129439916
NCBI-ProteinID:
XP_055054815
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All DBs
Position
4:15106723..15118311
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AA seq
1019 aa
AA seq
DB search
MVLELAAPAGAGPALQRCIPHIQRVFRVKVSCSTAESSCDNPDASSSIIVNIEDGKEEDC
TKAKDYIVSLISPVHKHRERLTLWLQRRLHSLRAAIEYESCAVVQVRDHALELQGGHAQV
TAACAMLQRLKMEHRGCRDPQPSPAVAGHDTPEEEEEEDEEAGEEGSSSESEGEARQQSG
DSSGGFGTAGSGEGGTGRRRDPLIATKPHRQLCRSPCLDRPSFSQSSTFQELRSDDTRSE
PSQKAPSLAPFTSAAPPSSRQTSDRDYQTKMDFALKLGYSGDQVESVLGKLGSSALINDV
LAELVRLGNKGEPESQGGAGTASLVPRSTGAKEAVSPEASLEEDTPDTYDNLRPIVIDGS
NVAMSHGNKEVFSCLGIQLAVDWFLEKGHKDITVFVPAWRKEQSRPDAPIKDQEILRKLE
KEKILVFTPSRRVQGRRVVCYDDRFIVKLACDSDGIIVSNDNYRDLQNEKPEWKKFIEER
LLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVPEHKKQPCPYGQYSKSKKCTYGHKC
KYYHPERANQPQRAVADELRAFAKLSAVKTMSEGALVKCGTLGAASKGDTSSEAKRVAPK
RQSDPSIRSVACEQEERLCPARKAEANSVPSLVSALSVPTMQPTKSHAAGALNTRSASSP
VPGSLHFTHSSLEHAGSVQYPPILVTNSQGASVAYGEPFPKYDSVVSDHGYYSMLSDFST
ISLQDSFCSLEQPEPVGVSGGYPGRAPSMCPEPSRSHSSDSFSSYSGEMYLNSMEGSLDD
SMKGPQTQPSAQTRLQAFAHGFHHEGLTRVQSYGTDEPKPGPRKQTSAHLAPHSQHPVVG
ARSSCPGDYPPLSQNVLPSASPAQPGRSLGMTRMDSISDSRLYESNPLRQRRPPLCREQH
ASWDPLPYSNEPYGYGGYGLTGGLMPCCERVMVRSMPEKMEQIWRSPWDSLPPFTSASRG
LMGDPQERHPIPEHQFQTYRNLCNIFPAYVVHSVMEKNPHMTDPQQLAAVIVTKLRSCH
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggttttggagctcgccgcgcccgccggtgcaggccctgcgctccagcgctgcatcccg
cacatccagcgggttttccgagtcaaagtgagctgcagcaccgccgagtccagctgcgac
aaccccgacgccagctccagtattattgtaaacatcgaggacggcaaggaagaagattgc
actaaagctaaagactacattgtgtccctgatcagtcctgtacataagcacagagagcgt
ttgacgctttggcttcagcggcgtctacattccctacgtgcagctattgagtatgaaagt
tgcgccgtggtgcaggtgagggaccatgcactggagcttcagggaggtcatgcgcaggta
acggctgcatgcgctatgctgcagcgcctcaagatggagcaccgcggctgccgcgacccc
cagccctcgcctgccgttgccggtcacgacactccagaagaagaggaagaggaggacgaa
gaagctggagaagagggaagcagttcggagagtgaaggagaagcaaggcaacagagtggg
gattcgagcggagggttcggcacagcagggtcaggagaaggaggaacaggaaggagacga
gatccgctcatcgcaaccaaacctcaccgacagctatgtcgctcaccctgtttggaccgc
cctagcttcagccagagcagcaccttccaggagttacgctcggatgacacgcgcagcgaa
ccctcgcagaaggcgccctcactcgcaccatttacatctgcagccccgccatcttcacga
caaaccagcgatcgagactaccaaaccaaaatggactttgctctgaaactcggctactct
ggagatcaggtagagtctgtgctgggtaaactggggtccagtgcattaatcaatgatgtg
ttggccgaactggtgcggctggggaataaaggagaaccagagagccagggaggagcgggc
actgccagtttagtaccgcggtcaacgggagccaaagaagcggtgagccctgaggcatcg
ctggaggaggacacacccgacacgtatgacaacctcagaccaattgtgattgatggatcc
aatgttgccatgagccatggaaacaaagaggtgttctcatgcctgggcatccaactggct
gttgattggttcctggagaagggccacaaagacatcacagtcttcgtcccagcatggcgg
aaagaacagtcaagacctgacgcacctatcaaagatcaggagatcctacggaagttagag
aaggaaaagatcctggtattcactccgtctcgcagagtccagggccgacgagtggtttgc
tacgacgaccgcttcattgttaagctagcctgcgattcggatggcatcattgtgtccaat
gataactacagagacctgcagaacgaaaagccggagtggaagaaatttatagaggagcga
cttcttatgtacagcttcgtcaacgacaagttcatgcctcctgacgatcctttaggcaga
cacggacccagtctggaaaatttccttcgcaagcgaccagtcgttccagaacataagaag
cagccgtgtccttatggtcagtacagcaaaagtaaaaagtgcacatatggtcacaagtgt
aagtactaccatcctgagagagccaatcaaccacaacgggcagtcgcagacgagcttcga
gccttcgccaaactctctgctgtaaagacaatgagcgaaggagcgcttgtgaaatgtggc
accttgggtgcagcttccaagggtgacactagttcggaagcgaagcgagtggcacccaaa
cgccagtctgaccccagtattcggtccgtcgcatgtgaacaggaagagagactctgccct
gcgcggaaggccgaggcaaactcggttccgtctttggtgtcagcgcttagcgttccgacc
atgcaaccgacaaaaagtcatgcggcgggagctctgaacacacgttcggcaagcagccct
gttccagggtctctgcactttacccacagctcactggagcatgcgggcagtgtccagtac
ccccccatcctggtcaccaatagccagggtgcctcagttgcatacggtgagcctttcccc
aagtatgattctgtggtaagtgaccacggctactattccatgctcagtgacttttccacc
atcagcctccaagacagtttctgcagtctggagcagccagaacccgtaggggtcagcggg
ggctatcccggcagagcccccagcatgtgcccggaacccagccgaagccattcgtcagat
tccttctcgtcttacagcggagagatgtacctcaactcaatggaggggagcctggatgac
agcatgaaagggccacagacgcaaccttctgcgcaaacgcgccttcaagcctttgctcac
ggtttccatcacgagggcttgacgcgtgtgcagagctacggtacggatgaacccaaacca
ggacctcgcaaacagacgtcggctcacctggcaccccactcccagcatccagttgtcgga
gcccgatctagctgccctggagactaccctccgctttctcagaacgtgttgccttcagcc
agccctgcacaaccgggacgctctttaggcatgacgcgcatggacagcatctcggactca
cgactctacgagagcaacccgctgcggcaacgcagaccacctctttgcagagagcagcat
gctagctgggaccctctgccatacagtaacgaaccgtacggttacggaggttacggttta
acaggaggccttatgccttgctgcgagagggtgatggtccgcagcatgccagagaagatg
gaacagatatggaggtccccatgggatagcttgccaccttttacgtccgcctctcgtggg
ctaatgggggacccccaagagcggcaccctattccagaacaccagtttcaaacgtaccga
aatctctgtaacatcttccctgcatatgtggtccattcagtcatggagaagaaccctcac
atgaccgatccccagcagctggctgccgtcatagtcactaaactacgttcgtgccactaa
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