Misgurnus anguillicaudatus (oriental weatherfish): 129439948
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Entry
129439948 CDS
T09481
Symbol
atrxl
Name
(RefSeq) ATRX chromatin remodeler, like
KO
K10779
transcriptional regulator ATRX
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129439948 (atrxl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manu03000
]
129439948 (atrxl)
03036 Chromosome and associated proteins [BR:
manu03036
]
129439948 (atrxl)
Transcription factors [BR:
manu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
129439948 (atrxl)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
129439948 (atrxl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
HDA2-3
Motif
Other DBs
NCBI-GeneID:
129439948
NCBI-ProteinID:
XP_073717334
LinkDB
All DBs
Position
22:complement(38832881..38855940)
Genome browser
AA seq
1742 aa
AA seq
DB search
MSAEVLRPGPPVAAAGSKLGELIGKLHQYLENATEGKNEPTLPGHWNGTVAKEYLEMKAK
AHDAEEAHGSSTARSSSRSRRKPIVVTKHSGMNESDVSSESGAEDGMSVHSNEPNTGILP
IGTVFVVPEPVGTDSRDDFRGPEFRSRRVQKQQKDFADKRRGYETERVNCTACGQQVNPF
QRDAIYRHPMLKVLICKNCFKYYMSDDISKDSEGMDEQCRWCAEGGSLIGCDYCSNAFCK
KCVLRNMGRKELSTIMEEERKWYCYVCSPEPLVELVMACDSVLDDLEQAQKRVSRPDSNS
VRGKARGGRVGGGPVPSGGLYQRMQRFVDVTSSLSHSFREVIQSEAEEEVKVEEKQKRIG
QLRMFRVVLNDLLAANRALQEALDHELTGAKCPSGESKPKARARQRKSRSSQIPGVTKEL
VVKLTPVPVNTQAIACTSIPPSPDGQTIESNMTGGELEKCEVEVRGVEVEVMTEKEETEN
YCDNNDAEEEEEEEEGDDDMTDAKSLSLADENKRSPRVKTTPRRRHMATSPTAEHAGLAE
DDSDSDEVPEVLLQTAAAMTNSEEENLVDSSGARDDVNQHVRKQRLFGLVKTTPPDRSSR
KRNLKERSSSSSSSSSASSRRGSQDQGSVDRTSRGRARKVARMIEQAGSSSSEAGGQELE
SGRSSDSDDQRIKPLTEGVSLLGSGNFQQSSGDEMDIQPAPSLSVDDDDLENRIAKQILL
AQIKANYSSASELDSNSDERSESETGEKKSKKGTPEATAAEDCDESDSSGSQSESRHRHR
LLRHGLDLPEPEEQGHKKGEKTKNMERQIQDSDDASESTDESSDSALSEELSQSETEETG
LESHTPNDKLQSPTDRPDEPGTPDNDVSVISEECLRSTPHGRRQIRRLLEVDQLAQETQS
ALREEEERRRRLAEREKQRLENEKREQEEADSEVIIVSEKPAHSFSPLVLEEDDVTHKPV
VQVHMHLLRKLKPHQREGVRFMWDCCCESVQSVKSSPGSGCILAHCMGLGKTLQVIAFLH
SVLSCRQLPLKRALVVCPLNTVLNWRSEFDKWQRGMRPHTLRVTELATVKSVAVRVELLN
DWFHNGGVMIMGYEIFRILTQNGKKYSKHKDAFNSMLLNPGPDLVVCDEGHILRNAESRI
SKAMQAIRTRRRIILTGTPLQNNLVEYHCMVNFIKENLLGSLKEFRNRFVNPIQNGQCAD
STPADVRLMKNRSHVLHELMSGFIQRRAYSVLKSCLPPKCEYVLFIRMTPLQCQLYKHYL
QTFVGKGAGVKNLFQDLHILSLIWTHPWCLKLSHLSKNKGKETEPSTDFTALGTSAAQHS
EKSNGSRSKETKIRDADDIDLVIQGSGCTQNPKVTNTPATEIVGEGTGFSAGNVPCAEWY
LPFVKEADAKVLEHSGKLQLLMEILQWAEELEDKVLVFSQSLISLDLIESFLQYANETNG
KEECPYKGQKLWIKHKDYYRLDGTTSACARKRWAQEFNNVKNTRGRLFLISTRAGSLGIN
LVAANRVVVFDACWNPSYDIQSIFRVYRFGQNKPVSVYRFLAQGTMEQKIYERQVAKQSL
SSRVLDQQQIQRHFTQSQLNELYRFQPNLQPSIHTQAPVDEVLMFLLQSCGQLIVSYHEH
DSLLDHREEEELSEEERRAAWDEYRAEKVASVQNTNAPPQTQLSRKASKQLKHIQQQMLA
VRNLIQASRTGTPTSLQVKQGSTPPSAARRPSDFITLQLGDPGAVHAALNSNLRPDPSLS
HH
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgaggtcctgagacccgggccgccggtggctgctgcgggcagtaagcttggt
gagctgattggtaaactccaccagtacctggaaaatgccacagagggcaaaaatgaacct
actttaccgggacactggaatggaaccgtggccaaagagtaccttgagatgaaagccaaa
gcccatgatgcagaggaggcccatggctcctcgacagcacgatcttcaagtcgttcaagg
aggaaaccgattgttgtcacaaaacacagtgggatgaatgagtccgatgtttcatctgag
agtggagcagaggatgggatgtctgttcactccaatgaacctaacaccggcatcctacct
ataggaacggtatttgtagtgcctgagcctgtgggtacagatagccgtgatgatttccgt
gggccggaatttcgcagcagacgagttcaaaagcagcaaaaagattttgctgataaacgt
agaggatacgagactgagagggtaaactgcactgcgtgtggccagcaggtgaatcctttc
cagcgtgatgccatctataggcaccctatgcttaaagtgctgatctgcaagaattgtttt
aagtattatatgagtgacgacatcagcaaggattcggaggggatggatgagcaatgcagg
tggtgtgcagaaggaggcagcctgattggttgcgattactgcagcaatgccttctgtaag
aaatgtgtgctacgtaacatggggagaaaggaactgtcaaccatcatggaggaggaaaga
aaatggtactgttatgtgtgcagtcccgagccattggtggagctggtgatggcctgcgac
tcagttctcgacgacttagaacaggctcagaaacgagtgtctcgtcctgattcaaactcg
gttcgaggaaaagctaggggtggtcgagtaggaggtggcccagtgccctctggaggacta
tatcaacgaatgcagcggtttgtggacgtcacctcatctttgagccattccttcagggaa
gtcattcaaagcgaagcagaggaggaagtgaaggtggaagagaagcaaaagagaattggg
cagctgaggatgtttcgtgtcgttctgaatgacctgctagcagccaatagagcattacag
gaagcactggaccatgagttaaccggggccaaatgtcccagtggagaatctaagccaaaa
gcgagggcaagacagagaaagtcaaggtcttcgcagatccctggtgtcactaaagagcta
gtggtcaaactcacacctgtaccagtcaacacacaagccatcgcttgcacttccatccct
ccatcacctgacggacagacaatagagagtaacatgacgggtggagagctagagaaatgt
gaggtggaggtgaggggagtggaggtagaagtaatgactgagaaagaagagacagagaat
tattgtgataataatgatgctgaagaagaggaggaggaggaggagggggacgatgacatg
actgacgcaaaaagtttatcattagccgacgagaacaaacgttctccacgtgtgaaaacc
acgccacgcagacggcacatggccacgagccccacagctgagcatgctggtctagctgag
gatgactccgattctgatgaggtgcctgaggtgcttcttcagacggccgctgccatgacg
aacagcgaggaagagaatttagttgatagcagcggagccagggatgacgttaatcaacat
gtccgaaagcagcggcttttcgggctagtgaagaccactcctccagacagaagctctcgc
aagcgaaacctcaaagagaggtcatcgtcatcttcgtcatcctcttccgcatcttcgagg
aggggctctcaagaccaggggtcggtggacagaacgagcaggggaagagctcgcaaagtt
gccaggatgatagaacaagctgggagttcctcgagtgaagctgggggacaggaactggag
agcgggcggagcagtgactcggacgatcagaggatcaaaccgctgacagagggcgtctcg
ttgctcggatctggaaatttccagcagtcttccggtgatgagatggacatccaaccggct
ccttcattgtctgtggatgacgatgatttagaaaatagaattgcgaagcagattctgctg
gctcagatcaaagctaactactcctcagcttccgagctggacagcaactctgatgaacgg
tcagagagtgagaccggagagaagaagagcaagaaaggcacaccggaggctacagctgct
gaagactgtgatgagtccgattccagtgggtcacagtctgagtcacggcaccggcaccga
ttgctacgtcatggtcttgatttgccagagccagaagaacaaggacacaagaaaggagaa
aaaacgaaaaatatggaaagacaaattcaagattcagatgatgcttctgagagcaccgat
gaatcaagtgactctgccttaagtgaggaactcagccaatcagagactgaagaaacaggg
cttgagtcgcatactcctaatgacaaacttcagagcccgacagatcgtcctgatgagccg
ggcactcctgataatgatgtttctgtaatctctgaggaatgtttgaggagtacccctcac
ggaaggagacagatcagacggctcttggaggtggatcaactggcccaggaaacccagagc
gctctgagggaagaggaggagcgaagaagaaggctagctgagagagaaaaacaaagattg
gaaaatgagaagagagaacaagaagaagcagactctgaggttatcatagtatctgagaaa
ccggctcatagcttttccccattggttcttgaggaagatgatgtaacgcacaagcctgtg
gtccaagttcacatgcacttactgagaaaacttaaaccacatcagcgagagggtgtgcgg
tttatgtgggactgctgttgtgagtccgtccagagtgtgaaatcgtctccgggctcaggc
tgtattctggcccactgcatgggactgggaaagaccttacaggtcatcgcgttccttcat
tcagttttgtcgtgtagacagttgcctctgaaacgtgctttggtagtgtgtcctctcaac
acggtgctgaactggaggagcgagttcgacaaatggcagaggggtatgagaccccacaca
ctgagggtaacagagctggccacagtaaagtctgtggctgttcgtgttgaactcttgaac
gactggtttcataatggtggggtgatgatcatgggttatgaaatttttcggatccttaca
caaaatggaaagaaatacagcaaacataaagatgcattcaactcaatgctgctgaaccct
ggccctgacttggttgtatgcgacgaaggtcacatcctaaggaatgccgaatccaggatc
tcgaaagccatgcaagctatccgcacacgtagaagaatcatattgacgggcacgccgctc
cagaacaaccttgttgaatatcactgtatggtaaacttcattaaagagaacctgctggga
tctctgaaggaattccggaaccgttttgttaatcccatccagaatggccaatgtgcagac
tccacccctgctgatgtcagactcatgaaaaatcggtcacatgtcctacacgagctgatg
tcaggattcatacagagacgggcctactctgttttaaagtcctgtctgccacccaagtgc
gagtatgtgctgtttatcaggatgacacctttgcagtgtcagttatacaaacactatctg
cagacgtttgtagggaaaggagcaggcgtgaaaaacttgtttcaggaccttcatattctg
agtttgatctggacccatccctggtgtcttaaactttctcatctgagcaagaataagggc
aaagagacagagccttccactgactttacagcactaggaacaagtgcagcgcaacattct
gaaaagtcgaatggttctcgaagcaaagagacaaagatcagagatgcagatgatattgat
ttagtcatccaaggcagtggctgcactcaaaaccctaaagtcaccaacacacccgctaca
gaaattgttggtgagggaactgggtttagtgctggtaacgtgccatgtgccgaatggtat
ctgccatttgtaaaagaagctgatgccaaagtgctggagcattctggcaaattacagttg
cttatggagattttacaatgggcagaggaactggaggacaaagtgctggtgtttagtcaa
tctctgatatccctggatcttatcgaaagtttcctacaatatgcgaacgagaccaacggg
aaagaagagtgcccatacaaaggacagaaactgtggataaaacataaagattattatcgc
ttggatggcacgacaagcgcctgtgctcgcaagagatgggctcaagagttcaacaatgtt
aaaaacacaagagggaggttgtttctgatctccactcgtgctggatctctggggatcaat
ttggttgccgcaaaccgggttgtggtgtttgatgcctgctggaatccttcatatgatatc
cagagcatcttcagggtctatcgctttggccagaacaaacctgtatctgtgtacagattt
ctggctcagggaacgatggagcagaaaatttacgagcggcaggttgccaaacagtcttta
tcctcccgtgttttggaccagcagcagattcagagacacttcacacaaagccagctgaat
gagttgtaccgcttccagccaaacctacaacccagcatacacacacaagcacctgtggat
gaggtgctgatgtttcttctgcagagctgtgggcagctcatagtaagttatcatgagcat
gactcattgttagaccaccgagaggaagaggagttgagcgaagaagagcgcagagcagcc
tgggatgagtaccgtgcagagaaggtggcctccgtccagaacacaaatgcaccgccccaa
acgcagctcagcagaaaggccagcaaacagctaaagcatatacagcagcagatgttggct
gttcgaaacctcatccaagcatccaggactggtactcctacctcactgcaagtcaaacaa
ggcagtaccccaccctctgctgctcggcgcccttctgacttcatcaccttgcaattgggg
gatcctggggcggttcacgcagcattaaactcaaacttgagacctgatccctctctatcc
caccactga
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integrated database retrieval system
