Misgurnus anguillicaudatus (oriental weatherfish): 129440343
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Entry
129440343 CDS
T09481
Symbol
arhgef28a
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129440343 (arhgef28a)
Membrane trafficking [BR:
manu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129440343 (arhgef28a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
SOS1_NGEF_PH
C1_2
PHD
PH_13
Prok-RING_1
PHD_2
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
129440343
NCBI-ProteinID:
XP_055055599
LinkDB
All DBs
Position
4:complement(25959590..26058310)
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AA seq
1818 aa
AA seq
DB search
MSSTGAAAIMELSRRKVPLYGQVEVCGKLQGSQCIQEDTDYYVVLIGTSLHHVTPAHRTE
DHSSLRFTVPGHDVPEKVSVKFYSCMRDSSNLPISPISHSDELFLEYKRDEAQKVAEQLM
NFDPSTSSSLEDILKKFCTEKEISSKQNHLDRNDLQGTDEFCDLKELIQSETPEETKQEL
GLCDQGNYSPREGSKTSEVDPKHKCTAGKHNAIDEKITQALANLHFLKWDGQTRRVNQDL
QAQTYHTATRLGFPHLSHFLLQESRGHKMVPTLDKGGQTPLTQHGDPALFSSLTKPLKTV
WMCRVWTEGIHQLRFCPVTDSISLSVKHSTQIDAQSSIQLYREKSREPNTLAWVGCLKES
SVESTLTSDLCDKDLNIQLEVEDHMLEDSVFEEQLVLCIDEEEEDLNTSYSEKLSSSPGS
CTPIQRRPSEAATARLTAMLKNSTKDEELDLKYTVPGVTEDSSGTDSGVLQMSPVEIDTP
SPIKDEEGRRGRHPANRALSPTSPPGLMLDRLMRTTRSADLTCNTLSSPTESCDLRIFRS
PILFLSPSLVALEVDSEEDDDDDILMKKPLPQPASELKNSGDEHVKFNPTHDLTCTRSHS
ASSGSHSAPAKDVEQGIRLRSYSYTSPKISLLPPRFSRDAQPPPTDLNQDGALSSTSGSR
SLLQALSLSKSLSLLNPVKHRASSTSEQAQEKRELRFRRRAQSADDETNEELADSLQHLT
LSEFLKEIEEEEWDKYIIPSKTESEKYSVSRTFSFIKSRMYSTRNKNKGKGKEKETKDKQ
GNGHQFSAGSVMGPSLCEICGKPASGKDILHCTNCAVSVHKGCKDSTTPCQKKPHDKYSV
TTVKSKTASLPQNFTVREGSSSSSQMSPSASLPVMMSRDATPLPCPLSRSVPSGTERLSE
SPEADSDSSSWQNHIQPEDLQTLESSTSTDSSLIEDSVDSPLQTELVMNAVDLEAESWSL
AVDPQFCKMQEKRIIKRQDVIYEFMQTELHHVHTLMIMAEVFRRGMREEVGLDADTIGRI
FPCLDELILLHRDFLSSMRERRQSCIQPNSTKNYLIHRVGDIFLQQFSQENAEKMKRVYG
EFCSHHSEAVSFFKELQQQNKRFQLFIKQQSSNSLVKRREIPECILLVTQRITKYPVLLE
RILQYTEEGTEEHADLSRAIVLIRELISAVNQSVSQYDQNQRLSEVLGRMENKCSTKLKS
GHTFRKQDITNGRALLHQDPLLWKTATGRLKDVLALLLSDYLVFLQEKDQKYIFAAVDLK
PPVIPLQKLIVREVANEERGMFLISASSPGPEMYEVHAASKEERNAWMRHIREAVENCPE
EETETTSESEEERRVAEAKVQKIHRLQESLCGHDQLICANLEEKMHIYAELSIMAGQREA
GPEPRLLVRPSTEDIPQAAVLLNAALKEAENLKAALSSHCAIIEEQIQHEPCTSPSSPLS
EPQSPLADTSRCEEEERRGEGGVETEAIIHSIVADEHLDLKVSQSVQSLTQLLYSLQAAV
TIQDSCYEVQKLLLLLSSPAPNPRPFPIVRGNLALQEQERQREVERRREELADVARLRDT
LARERQQWERECQAREVQQWEMEAALEGREFLCHLEERRLQSERQELQEQLQEYQQSLER
LREGQKSVEKEKERLDAQRRLLESLEPESKPDLVIPLDGQQTQDGSHLGGEHEHGSIFVN
EAAFTSPSLNNRHIHLHHPHRHHQTSHLHSGSLGYTDSPSTQNSLNSLLARSNHRRSSVG
VSEDSWTGGIMYSASLRSQGTESPNNDVGQLSHVPGSLCGGVPGAGLYQADVLLVNQPFV
TMETENRDADGEENIVYL
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaacaggtgctgctgctataatggagctcagcaggagaaaggtgccactttat
ggtcaagtggaagtctgtggtaaactgcaggggtctcagtgtattcaggaggacactgat
tattatgtggtccttataggcacgtcccttcaccatgtgactccagcccacagaactgag
gaccacagttcacttagattcactgttccaggtcacgatgttccagagaaagtgtctgtg
aagttctacagctgcatgagagacagtagcaatttacccatcagcccaatctctcattcg
gacgagctttttctggagtacaaacgagatgaggcccaaaaggtggcggagcagctgatg
aacttcgatccctcgacgtccagcagccttgaggacatcttaaagaaattctgcacggag
aaagagatctcatctaaacagaatcatttagataggaatgacctgcagggaacagatgag
ttttgtgatctgaaggaattaattcaatctgaaacaccagaagagacaaaacaggagctc
ggtctttgtgatcagggaaattacagcccgagagaaggatcaaaaacgtctgaggtggat
ccaaagcacaaatgcacagcaggaaaacacaatgctattgatgaaaaaatcacacaggcc
ttggctaacttgcactttctgaaatgggacggccaaactagacgggtgaatcaagatctt
caggctcagacgtatcatacggccacacgtttagggtttccccacctcagtcacttcctc
ctccaggagtctagaggtcataagatggttcccacactcgataagggaggacagactcct
ctcacgcaacacggagatccggcgctcttcagctctttaacaaagcccttaaagacagtg
tggatgtgtcgggtctggactgaaggcattcaccagctccgtttctgccctgtcactgac
tctattagcctgtctgtcaaacacagcacacaaatagatgcacaaagcagcatccagctg
tacagagagaagagcagagagccgaatacacttgcatgggtgggctgtttaaaagagtct
tctgttgagagcacactcacatctgatttgtgtgacaaagatctgaacatccagttggaa
gttgaggaccatatgcttgaagatagtgtctttgaagaacagcttgttctttgtattgat
gaagaggaagaagacctaaacacatcttactcagagaagttgagttcctctcccggctcc
tgcacgccgattcaacgtcggccctcagaagcagctacagccagactcacagcaatgctt
aaaaactccaccaaggatgaggaacttgatttaaagtacactgttcctggtgtcacagag
gacagctctgggacagatagtggggtgttgcaaatgtcaccagtggaaatagatactcct
tcacctattaaagatgaagaagggcggaggggaaggcatcctgccaatcgcgctctctcc
cccacctctccaccaggactgatgctggatagactcatgcgaaccactcgatctgctgac
ctgacctgtaacacgttaagctcacctacagagtcatgtgacctgagaatttttagaagt
ccaatcctctttctaagcccgagtttggtggccttggaggtggacagtgaagaggatgac
gacgacgacattttaatgaagaagccccttccccagccagcatccgagctcaaaaatagc
ggagatgagcatgttaagttcaaccccacccatgatcttacctgcacacgttctcactcc
gcctcctccggctcgcactccgcccctgcaaaggatgttgagcaaggcatccgtcttcgt
tcatattcctacacctcgcctaaaatcagcctgctgcctccgcgattcagtagagatgct
caacctccacccacagacctcaaccaggatggcgccctctccagcaccagtggcagcagg
tctctactacaggcactgtctttgtctaaatctctctctctgctcaaccctgttaaacat
cgtgccagcagcacatcagagcaagctcaagagaaaagggagttaaggtttcgtagacgt
gctcagtcggccgatgatgagacaaacgaagagctggccgactctctccaacacctcacg
ctctccgaattcctaaaagagatcgaggaagaggaatgggacaaatatatcatcccttcc
aaaacagaatctgaaaaatacagtgtcagccgcacttttagcttcatcaagagtcggatg
tatagcacccgcaacaagaacaaggggaaagggaaggagaaagagaccaaagacaagcag
ggaaatgggcaccagttctcagcgggatctgtcatggggccctcactttgtgagatctgt
ggaaagcctgcttctggaaaagacatcctccactgtacaaattgtgcagttagtgtccat
aagggctgtaaagactcgactacgccatgccagaagaaacctcatgacaaatattcagtg
acaacagtgaagagcaagacagcctctcttcctcaaaattttacagtgcgcgaaggttcc
tcctcatcctctcagatgtccccctctgcctctctccctgtgatgatgtcacgagacgcc
acccctcttccttgtcccctgtccagaagtgtgccgtcaggtactgaaaggcttagtgag
agcccagaagcagacagtgattcctcctcctggcaaaaccacatccagcccgaggatctc
caaacattggaatcttcaacatccacagattcatccctcattgaagactcagtagactcc
ccgctgcaaactgagctggtgatgaacgcagtggatttggaggcggagtcatggagccta
gcagtagaccctcagttctgtaagatgcaagaaaaacgcatcatcaagagacaggatgtg
atttacgagttcatgcagacagaactccatcacgttcataccctcatgataatggcggag
gtcttcaggcggggaatgcgggaggaagtcggactggatgcggacactattggtcggatt
tttccttgtttggatgaattaatactgttgcaccgtgacttcctgtcatcgatgagggaa
cgacggcaaagctgtatccagcccaacagcaccaagaactacctcattcaccgtgtgggg
gacatttttttgcaacaattctcccaggagaatgcagaaaagatgaaacgggtgtatggt
gagttttgcagtcaccactcagaggcagtaagtttcttcaaagagcttcagcaacagaac
aaaagatttcagctgtttattaaacaacaaagtagcaactcgctggtaaagaggcgagag
atcccagaatgcattttattagtgacgcagcgaatcacaaagtaccctgtcctcctggag
agaatactgcagtacacagaggagggcacagaagagcacgctgacctatctcgcgcaatt
gttctgatccgagagttgatctcagctgtgaaccagagtgtgagtcagtacgatcagaac
cagaggttgagcgaggttctgggtcgtatggagaacaaatgctccaccaagctgaaaagc
ggtcacaccttccgcaagcaggacatcaccaatggcagggctctgctacaccaggaccct
ctgctctggaagacggccacaggaagattaaaagatgtcctggcgcttttgctgtcagat
tatctggtgtttcttcaggagaaagatcagaagtacatctttgctgctgtggacctgaag
cctccagtgattcctctgcagaagttgattgtgcgagaggtggccaatgaggagagaggc
atgtttctgatcagtgcctcttcacctgggcctgagatgtatgaggtgcacgctgcttct
aaagaggagcgcaatgcctggatgagacacatcagagaagctgtggagaattgccctgaa
gaggaaacagagaccacaagcgagtcagaagaggaaaggagagttgctgaagcaaaagtt
caaaagatccacaggttacaagagtctctgtgcggccacgatcagctgatctgtgccaat
ctggaggagaaaatgcacatctatgccgagctgtcaatcatggctggccagcgtgaggcg
ggaccagagcccagactgcttgtaaggcccagtactgaagatattcctcaggctgctgtg
ctacttaatgcagcgcttaaagaggcggagaacttgaaagcagctctttcatcccactgc
gccattatagaggagcagatccaacatgaaccctgtacatctccctcctcaccgctgtct
gagcctcagagccctctggccgacacctcacggtgtgaggaggaggagcggagaggagaa
ggtggtgtggagacagaagccattattcacagcatagtcgctgacgaacatttagacttg
aaggtgagtcagagtgtccagagtttgactcagctgctgtacagtctacaggccgcggtc
accatccaagacagttgctatgaagttcagaaactcctccttctgttatcaagcccagcc
cctaatccccgcccatttcctattgttcgcggcaacctggccctgcaggagcaggagcgc
cagagggaggtggagcgtcggcgggaggagctggcagacgtggcacgtctgcgggacacc
ctggcgcgagaacgccagcagtgggagcgggagtgccaggcgcgggaagttcaacagtgg
gagatggaggcggcattggaggggagggagttcttatgccacctagaggagcggaggtta
cagagcgagcgacaggaactccaagagcagctgcaggagtaccagcaaagcctggagagg
ctgagagaaggtcagaagagcgtagagaaggagaaggaaaggctggatgcccagcgcaga
ctgttggagagtctggagcctgaatctaagcctgatctggtcataccactggatgggcaa
cagacacaggatggcagtcacctgggaggcgagcatgagcatggatccatttttgtgaat
gaggcagcgtttacgtctccatcactaaacaacagacacatccatcttcatcatccacac
cgtcatcatcaaacatcccatctgcactcaggatctttaggatatacagactctcccagc
actcagaacagtctcaattcactgctggcacgatccaatcacagacgcagctctgttgga
gtatcagaggacagctggaccggaggcataatgtactcagcctcgctaagaagtcaaggc
acagagagcccaaacaatgatgtgggtcagctcagtcacgtcccgggatcgttgtgcgga
ggagtcccaggggcagggctttatcaagccgatgtcctgctcgtcaaccagccctttgtt
accatggagacagagaacagagatgctgatggagaggaaaacattgtatatctctga
DBGET
integrated database retrieval system
