Misgurnus anguillicaudatus (oriental weatherfish): 129440480
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Entry
129440480 CDS
T09481
Symbol
cnot6l
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129440480 (cnot6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129440480 (cnot6l)
Enzymes [BR:
manu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
129440480 (cnot6l)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129440480 (cnot6l)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129440480 (cnot6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_R13L1-DRL21
LRR_LRWD1
LRR_9
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
129440480
NCBI-ProteinID:
XP_055055832
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All DBs
Position
22:26536041..26560052
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AA seq
546 aa
AA seq
DB search
MPKEKYDPPDPRRLYTIMSAEEAASGKKSHWTELEISGRVRSLSTSLWTLTHLTALHINN
NNLSRIPPEIAKLPNLVYLNLSSNKLRSLPAELGNMVTLRELLLNNNCLRVLPYELGRLF
QLQILGLKGNPLSQDILNLYQESDGTRKLLNYMLDNLAVHPEQLPQRPWITLKERDQMMS
TAVFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEITNCDADIISLQEVETQQ
YYAFFLETLKERGYDGFFCPKSRAKLVSEQERKHVDGCAVFFKTEKFALVQKHTVEFNQV
AMANSEGSEVMLNRVMTKDNIGVAVLLEVKKDLFASGLKECPEKQHLLVANAHMHWDPEY
SDVKLIQTMMFLSELKSIAERASSSINSASPTSDASSIPIVLCADLNSLPDSGVVEYLSS
GGVAENHKDFKELRYSDCLNNFSCNGKPDGSVTHSFQLKSAYEGNLMPYTNYTYDFKGVI
DYIFFSKTHMSVLGVLGPLETQWLRDNNITGCPHPHIPSDHFSLLAQLEYHPPLPTLNGL
HLSVHR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaaaaatatgaccctccagacccacgcagattatacaccatcatgtctgct
gaggaggcggccagtggaaagaaatcacactggaccgagttggagatttctgggcgggtc
agaagcctgagcacctcattatggacactgacccatttgactgcccttcacatcaacaac
aacaaccttagccggattcctcctgaaatcgcaaagcttcccaatcttgtgtaccttaac
ctatcctccaacaaactacgcagcctgccagcagaactcggcaatatggtgactctcagg
gaattgcttttgaacaacaattgtttacgagttttaccttatgaacttggtcggctgttc
cagttgcaaatacttggactcaaaggtaatccactgtcccaagatatactcaacctttat
caggagtctgatggaacaagaaagttattaaattacatgcttgacaatcttgcagtacac
ccagaacagctaccccaaaggccttggatcactttaaaggagcgagaccaaatgatgtcc
acagctgtcttcacagttatgtgctacaatgtactatgtgacaagtatgcaacaaggcag
ctgtacggctactgtccctcctgggctcttaactgggagtacaggaagaagggtatcatg
gaagagatcacaaactgcgatgctgacatcatcagcctacaggaagtggaaacacaacag
tactacgctttctttttggaaacattaaaggaacgtggatatgatggatttttctgccca
aagtctcgtgccaaactcgtgtccgaacaggagcggaaacatgtagacggctgtgctgta
ttctttaagaccgagaaatttgctctggtgcagaaacacacggtggagttcaatcaagtt
gccatggcaaattcagagggctcagaggttatgcttaatagagtcatgaccaaagacaac
atcggagtagctgtcttgttggaggtgaaaaaagacctgtttgctagtggtttaaaggag
tgtccagagaagcaacatctgttggtagccaacgcccatatgcactgggatccagaatac
tcagacgtgaagctcatccagaccatgatgttcctctctgagctgaagagcatcgctgag
agagcctcaagctccatcaactctgcctcacccacttcagacgcaagctccatacccatc
gtcctgtgtgctgacctcaactccctcccagactctggtgtggtggagtatctgagcagt
ggtggagttgcagaaaaccacaaagactttaaggaactgcgctacagtgactgtttgaac
aacttcagttgtaacggcaaacctgacggcagcgtcacgcacagttttcagctgaagagc
gcttacgaagggaatctcatgccctacacaaactacacctatgacttcaagggtgtgatt
gattacatctttttctctaagacacacatgagtgtcctgggagttttgggtccgctggag
actcagtggctgagggacaacaacataaccggctgccctcaccctcacatcccctccgat
catttctctctcctggctcagctggaatatcacccacctttgcccaccctcaacgggctg
catctgtccgttcacaggtag
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