Misgurnus anguillicaudatus (oriental weatherfish): 129440638
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Entry
129440638 CDS
T09481
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129440638 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
manu03021
]
129440638 (smarca2)
03036 Chromosome and associated proteins [BR:
manu03036
]
129440638 (smarca2)
Transcription machinery [BR:
manu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129440638 (smarca2)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
129440638 (smarca2)
Chromatin remodeling factors
BAF complex
129440638 (smarca2)
PBAF complex
129440638 (smarca2)
GBAF(ncBAF) complex
129440638 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
129440638
NCBI-ProteinID:
XP_073716957
LinkDB
All DBs
Position
22:complement(22036221..22119980)
Genome browser
AA seq
1585 aa
AA seq
DB search
MSTPSEASIGMSHAGPSPGAGLSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPLGMQG
QGSGDYSQDSMHPMHKPMEAMHEKGMGEDIHYGQMKGVGMRSLHSGMGPPQSPMEQHSQG
YMSPHPSPMGQVPEHVPSPMSGGGPTPPQIPQGPSGPMMPMDPQGMGQQARGPSAFSPVQ
LQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQPVNSGSYNRPPGMQMSHGGP
ATGPCPTPTMQTHTQSSGPKPWPEGQGAEPLSIPQKLPVPYSSGRPSPAPPLAPTATQSV
PSTSLTSQSQAQLQPGPGQPSLIIQLQQKQNRITPIQKPQGLDPVELLQEREYRLQARIT
HRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRLDVVACMRRDTTLETALNSKAY
KRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSISGKMQK
LTKAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDE
YVANLTELVYQHKAAQAAKEKKRKRKKKKPESGDAEGMGAIGPDGEPIDESSQMSELPVK
VIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGSEFEEEDEEEVVSRAES
EEKKVIDPNSDEVSETAAKHIIESAKQDVDDEYSVQAGETSTQSYYGVAHAVIERVDIQS
SLLVNGLLKQYQVQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPY
LIIVPLSTLSNWVYELDKWSPSIVKIAYKGTPSMRRSLVPQLRSGKFNVLLTTYEYIIKD
KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLN
FLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVES
QLPEKVEYVVKCDMSAIQKVLYRHMQGKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKIC
NHPYMFQHIEESFAEHLGYPNGIISGKDLYRASGKFELLDRILPKLKATNHRVLLFCQMT
SLMTILEDYFSYRNFLYLRLDGTTKSEDRALLLKKFNEEGSQYFIFLLSTRAGGLGLNLQ
AADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQ
KVIQAGMFDQKSSSHERRAFLQAILEHEEQNEEEDEVPDDETLNQMIARNEDEFELFMRM
DLDRRREDARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEEKDKIFGRGSRHRRDVDY
SDALTEKQWLRAIEDGNLEEIEEEIRLKKRKRRRHVDKDCSRREDAEKSKKRRGRPPAEK
LSPNPPKLTKQMNAIVDTVINYRDASSRQLSEVFVQLPSRKELPEYYELIRKPVDFKKIK
ERVRNHKYRSVSDLEKDVMLLCHNAQTYNLEGSQIYEDSIVLQSVFKSARQKIAKEESED
DSDDDDDDDDDDDDESEAESKSMKVKIRLSKRDERSHDKGKKRQSRVKAKPVVSDDDSDE
DLDNFERNMSSQRAATAMMSKEEMS
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgtctacccccagcgaggcatcaattggaatgtctcatgctggtccctcaccaggtgct
ggcctgtccccggggcccatcctagggcccagccctggacctgggccctctcctggctct
gttcacagtatgatgggccccagccctgggccgccaagtgtcccccttggtatgcaggga
caaggaagtggggattattctcaggatagcatgcacccaatgcataagcccatggaggca
atgcatgagaagggaatgggggaagatatacattatgggcagatgaaaggagtggggatg
agatccctgcacagtggcatgggtcctccacaaagccccatggaacaacacagtcaagga
tacatgtcccctcatccctctccaatgggccaggtgcctgagcatgtgcctagcccaatg
tcaggaggagggccaaccccaccgcaaatccctcagggtccgtcgggaccaatgatgcct
atggatcctcagggaatgggacagcaggccagaggcccgtctgctttcagtccagtccag
ttacagcaactaagggctcaaatcctggcttacaagatcctgggccgtggtcagcctctg
cctgagaatctgcagttagctgtgcagggcaagaggagccttcccacaatgcagcagcag
cctgtcaacagtggttcctacaacagacctccaggtatgcaaatgtctcatggagggcct
gccactggcccttgtcctactccaaccatgcagacccatacccaaagttctgggccaaaa
ccatggcctgagggtcaaggtgcagagccccttagcatcccacagaagctgcctgtccca
tattccagcggcaggccatctccagcccctccacttgctccaactgccacccagtctgtc
ccaagcacctccctcacttcacaatcccaagctcagcttcagccaggaccgggtcagccc
tctctcatcatacagctccagcaaaagcaaaatcgcatcactcccattcaaaaacctcag
ggtctggatccggtggaactcttacaggaaagggagtaccgacttcaggccaggattact
cacagaattcaggagctggaaaatcttcctggttcgttgccacctgatttgcggactaaa
gctactgtggagctgaaggccttaagactgcttaatttccagcgacagctgaggcttgat
gtcgtagcctgcatgcgcagggacacgactctggagacggctctgaactccaaagcctac
aagcgcagcaagaggcagacgctgagagaagctcgcatgacagagaaactagagaaacaa
cagaagattgaacaagaaagaaagcgcagacagaaacaccaggagtacctcaatagcatt
ctgcaacatgcaaaagatttcaaggaatatcacaggtccatctctggaaaaatgcagaag
ctcactaaggccatcgctacctggcacaccaacacagagagggaacagaaaaaggagaca
gaacgaattgaaaaggagaggatgaggagattgatggctgaggatgaagagggttacagg
aagctaattgaccagaagaaagacaagcgcctggcctacctgcttcaacagacagatgaa
tacgtggccaacctgactgagcttgtttatcagcacaaggctgcacaggctgccaaggag
aagaaaaggaagagaaagaagaagaagccagagtctggtgacgcagagggaatgggagcc
attgggcctgatggagagcccatagatgagagcagccagatgagtgagctgccagtcaaa
gtcattcagactgagacgggcaaagtcctacaggggacagatgcccccaagtccagtcag
ttagaggcctggctcgagatgaaccctggctatgaagttgcaccacgatcagacagtgaa
gagagtggctcagaatttgaagaggaggatgaagaagaggtagtctccagagccgaatca
gaggaaaagaaagtcatcgatcccaacagtgatgaagtgtctgagacagcggcaaagcac
atcatagagtctgctaaacaggatgtggatgatgagtacagtgttcaggcaggagagacc
agcactcagtcttactatggagtcgcccacgcggtcatagagagagtagacattcagtcc
tctcttctggttaatggactactcaaacagtatcaggttcaaggtctggaatggatggtt
tctctgtacaacaacaacctaaatggtattctagctgatgagatgggtctgggaaagacc
attcaaaccatcgccctcatcacttatctgatggaacacaagaggctcaatgggccgtac
ctcatcatcgtaccgctctcgactttgtcaaactgggtttatgaactggataagtggtca
ccaagtattgtaaaaattgcctacaagggcacgccgtccatgcggaggtctttggtgccg
cagctccgcagtgggaagttcaatgttctccttaccacctatgagtacataattaaagac
aagcatattctagccaagatccgctggaagtacatgattgtggatgaaggtcaccgcatg
aagaatcatcattgcaagcttacacaggtgttgaacacccactacgtcgctcccaggaga
cttttgctcacaggaacgcctttgcagaacaaactacctgagctttgggctctgctcaat
ttcctgctgcccactatcttcaaaagctgcagtacatttgagcagtggttcaacgccccc
ttcgctatgacaggagagagggtggacctaaatgaagaggagaccatcctcatcattcgt
cgcttgcataaggttttacggcctttcctgctgcgccgactgaagaaagaggtggagtct
caattgcctgagaaggtggagtatgttgtcaaatgtgacatgtcagctattcagaaggtt
ctttacaggcacatgcaaggcaaaggcatcctgctcacagatggttcagagaaagacaaa
aagggtaaaggaggagccaaaactttaatgaacaccataatgcagctgaagaagatctgt
aaccatccctacatgtttcagcacattgaggaatcttttgctgagcacttgggataccca
aatggcataattagtggcaaggacctgtaccgcgcctctggcaagttcgagttactggat
cggatcctgcccaagctaaaggccaccaatcacagagtgcttctgttctgtcagatgacc
tctctcatgaccatcttggaggattacttttcctaccgtaacttcctttacctgcgtctg
gacggaaccacaaagtcggaggacagagcgttgcttttaaagaaattcaatgaagaaggt
tcgcagtatttcatctttctgctgagcacccgggcgggaggtctgggccttaacttgcag
gctgcagacacagttgtgatctttgacagtgactggaacccccaccaggacctgcaggcc
caggaccgagcccatcgtattggccagcagaatgaagtacgtgtgttgcgtctgtgtacc
gtgaacagcgtggaggagaagattctagcagcggccaagtataaactgaatgtagatcag
aaagtcattcaggctggcatgtttgatcaaaagtcctccagccatgagcgcagagccttc
ctgcaggctattctggagcatgaagaacaaaacgaggaggaggatgaagttccagatgat
gaaactctcaatcaaatgattgcccgtaatgaggacgaatttgagcttttcatgcgcatg
gatttagaccgccgcagagaggatgcacgcaaccctaagcgtaaacctcgcctgatggag
gaggatgagctgccatcttggatcctgaaagatgatgcagaggtggaacgtctcacctgt
gaggaagagaaagataagatcttcggccgtggatcccggcaccgcagggatgtggactac
agtgacgcactgacggaaaagcagtggcttagggccatagaagatggcaaccttgaggaa
attgaggaggagatacgcctgaagaagcgcaagcgtaggagacacgtggacaaagactgc
agcaggcgtgaggatgcagaaaagtccaagaaaaggagagggcggcctccagcagagaag
ctgtccccaaatccacccaaacttacaaaacagatgaatgccatcgtagatactgtcatc
aattatagagatgcttcaagccgtcagctcagcgaggtcttcgtgcaactgccctccagg
aaagagctgcctgaatactatgaactgataaggaagccagtggacttcaagaagatcaag
gagcgtgtgcgcaaccacaagtacagaagtgttagcgatctggagaaagacgtaatgctt
ctttgtcacaacgctcagacttataatctagagggctctcagatctatgaagactccatt
gttctccagtcagtgtttaaaagtgctagacaaaagatagctaaagaggagagcgaagat
gacagtgatgatgatgatgacgacgacgatgatgatgacgatgaatcagaagcagagtct
aaatcaatgaaggtcaaaattaggctgagtaagcgagacgagagaagtcacgacaaaggg
aagaagagacagagtcgcgtgaaggccaaacctgtagtcagcgatgatgacagcgatgaa
gacctggacaatttcgagaggaatatgagcagtcagagggcagcaacagcgatgatgagt
aaggaggagatgagctga
DBGET
integrated database retrieval system
