Misgurnus anguillicaudatus (oriental weatherfish): 129440756
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Entry
129440756 CDS
T09481
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129440756 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129440756 (exosc2)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
129440756 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
129440756 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
Motif
Other DBs
NCBI-GeneID:
129440756
NCBI-ProteinID:
XP_055056223
LinkDB
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Position
22:complement(428953..431561)
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AA seq
294 aa
AA seq
DB search
MAAEMRLPAVHKHISLPASQLQDDKRLVVPGEVITSDTGFMRGHGTYMDEDRLTASVAGE
VERVNKLICVKPLKTRYNGEVGDVIVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGE
LRRRSAEDELAMRDYLQEGDLISAEVQSIFSDGALSLHTRSLKYGKLGQGVLVLVSPSLV
KRQKTHFHNLPCGASIILGNNGYVWLYPTPGQLDEEAGGYFTNMEPVSLSDREVISRLRN
CLLALGAHKVLLYDTSVLYCYESSLSHQIKDILKPEVMEEIILETRQRLVEHEG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagagatgagattaccagcagttcataaacacatttcattaccagcatcacag
ttacaggacgataaacgactggtggtacctggtgaagtcatcacatctgacaccgggttc
atgagaggtcatggcacatacatggatgaagacagactgacagcatcagttgctggagaa
gtcgagcgggttaataaactcatctgtgtgaagccactcaagaccagatataacggtgaa
gttggtgatgtgattgttggcagaattacagaggtgcagcagaaacgatggaaagtggaa
acaaactctcgactggattctgtattactgctgtcttcagtcaatctacctggaggagaa
ctgagacgtcgatcagctgaggatgaattggccatgagagattatcttcaggagggagat
ctcatcagtgcagaggttcagtccatattttctgatggtgctctttctctgcacactcgc
agtttgaagtatggaaagctgggtcaaggtgtgcttgtgctggtatcaccatctctagtg
aagagacagaaaactcatttccacaatctaccgtgcggcgcctccatcatactgggaaac
aatggttatgtgtggctgtatcctacaccaggtcagctggacgaggaggctggaggatat
ttcaccaacatggagcccgtgtccctgtcggatcgggaggtgatttctaggttaaggaat
tgtttgttggctctgggagctcataaggttttgctttacgacacaagtgtgctttactgc
tatgagtcttctctttcacatcagattaaagatatcctgaaaccagaagtgatggaggag
attattctggagacacgacagcgtctagttgagcatgaaggctga
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