Misgurnus anguillicaudatus (oriental weatherfish): 129440810
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Entry
129440810 CDS
T09481
Symbol
tia1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129440810 (tia1)
03041 Spliceosome [BR:
manu03041
]
129440810 (tia1)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129440810 (tia1)
Spliceosome [BR:
manu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129440810 (tia1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_Nup35
Calcipressin
Motif
Other DBs
NCBI-GeneID:
129440810
NCBI-ProteinID:
XP_055056320
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All DBs
Position
22:2519648..2531251
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AA seq
387 aa
AA seq
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MMDDEQPKTLYVGNLSRDVTEALIVQLFGQIGPCKSCKMIVDTAGNDPYCFVEFFEHRHA
AASLAAMNGRKIMGKEVKVNWATSPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGNQWLGGRQIRTNWATRKPPAPK
ATYETPNTKHLSFDEVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEVRVFPDK
GYSFVRFGTHENAAHAIVSVNGTSVEGHMVKCYWGKETTEMVTPMQQVQVPQQNKVGFAA
QPYGQWGQWYGNAQQISQYVPNGWQVPTYGVYGQAWNQQGFNHLQAGAGWTGVSAVSNGG
VVEQAQGVNGAVLANQSSMGTAGYHTH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgagcagcccaagaccctgtatgttggaaacttgtcacgtgatgtgaca
gaagcccttattgtgcagctctttggtcagattggcccctgcaagagctgtaaaatgatt
gtggatacggcaggtaacgatccatactgcttcgtggagttctttgagcataggcacgca
gcggcctccctcgcagccatgaatgggcgtaaaataatgggtaaggaggtaaaggtcaac
tgggctacctcaccaagcagccagaagaaagacacaagcaatcacttccatgtctttgtt
ggagacctcagtccagaaatcaccactgatgacatcagagctgcctttgcaccctttggg
aggatatcggacgctcgtgttgtgaaagacatggcaacaggaaagtctaaaggctatgga
tttgtttcattcttcaacaaatgggatgcagaaaatgctattcaacagatgggaaaccag
tggttgggtggcaggcagatcaggactaactgggccacaagaaaacccccagcaccaaaa
gccacctatgaaacaccaaacacaaagcacttgtcgtttgatgaggtcgtgaaccagtcc
agtcccagcaactgcactgtctactgtggtggggtcagtacaggcctcacagaacaactc
atgagacagaccttctctccctttggccaaatcatggaagttcgagttttcccagacaaa
ggctactcatttgtaaggtttggcactcatgaaaacgcggctcatgcgatcgtatctgtt
aacggcacatccgtagagggtcacatggtgaaatgttactggggtaaagagaccacggaa
atggtgacccccatgcaacaggttcaggtaccccagcagaacaaagttggcttcgctgca
cagccgtatggtcagtggggacagtggtacggcaatgctcaacaaattagccagtatgtc
cctaatggctggcaggtacctacttatggcgtgtatggacaagcctggaaccaacagggc
ttcaatcatttacaggctggtgcgggatggaccggtgttagcgcagtgagtaacggaggt
gtggtggagcaggcacagggagtcaatggagctgtgctagccaatcagtccagcatgggc
accgcaggataccacacacactga
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