Misgurnus anguillicaudatus (oriental weatherfish): 129440837
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Entry
129440837 CDS
T09481
Symbol
arhgef12b
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04270
Vascular smooth muscle contraction
manu04625
C-type lectin receptor signaling pathway
manu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
129440837 (arhgef12b)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
129440837 (arhgef12b)
09153 Circulatory system
04270 Vascular smooth muscle contraction
129440837 (arhgef12b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129440837 (arhgef12b)
Membrane trafficking [BR:
manu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129440837 (arhgef12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
129440837
NCBI-ProteinID:
XP_073716833
LinkDB
All DBs
Position
22:3193789..3301123
Genome browser
AA seq
1437 aa
AA seq
DB search
MSGTQSTLAERFPKKASRTGSILSKDHPPDKKPKSDKASVLPSHEFDPTELPVQSVVVDG
RAESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNGTL
VTHSNHVEVVKLIKSGSYVALTVLGRPPGLPQISLSDGEGEEGSLSSLNSPHSPGPTGPD
RSSSSPSPSERKAVPSVWAMTEDYSRNPTAKLLKEIQENKKHIPQLPEHLNKTAGQDGSL
SPRPGEGVLEDGGGDLERPPSWHGDPGTESSWTNSTTTPVTPSPFPESPCQRETPGHSPK
TTPRDSLNSCPSPDAEDTTDLDSQSNVGSPCLRLPPQIIGAEDDDFDTEHEQMNGQCSCF
QSIELLKSRPAHLAAFIHHVVSQFDPAPLLCYLYAELYKQSSSKETRRILMETFIIEKNA
SLKVTVPESIIADLERTAHSNNTERKRPEPISEDVYREYVQRLQDTLLPDIQKHLEDFRH
KRSMGLTLAEADLTRLDTERMRDRVALEKERSCAEHIISMIEQVLLTPQATEEDKCSTIQ
FVILSYMKQLGVKVKHKPKLMNLFPKIKKSIKPEKDGSEDKPKKQRISSVFLPRRPSRTE
AFLQNKVPELRQRLQKPQLPLGVGEQGDASSPPVRGSQSSDGSDGTNAPLMSPPYSAPAA
QGIDCNYRESDTAAVPSSALPRLGAGINSADLQDSYPVTTHFDFSPCTLEHLQEEESEID
KTQDTGTPRPDRRRMEMLGSGEVQSEDDQCAEAELEHPNWQTLVSKDVLSTLTHQEIKRQ
EVINELFYTERAHVRMLKVLDNVFYQPLTREAILPPADIKNIFTNLEEIVQLHVSLTEQM
TAVRKKNEAAVIDSIGDELLSWFSGEEEEKIKRAAGTYCSNQPFALELIKSKQKKDQRFN
SFIQEAESNRHCRRLQLKDIIPVETQRLTKYPLLLENIARYTEDPEERSKVKHAFDCCRK
ILSHVNQEVKEAENKQRLEDYQRRLDLSSLKQSENPMIAEFKSLDLTKRKMVHEGPLSWK
VNRDKTIELYTLLLEDILVLLQRQDEKLILKCHSKNLAGTAETKHIFSPIIKLSTVMVRS
VATDNRSFFVLSMSDNGAQIYELMAQTVSEQRTWQYQITHRADCMKTKLHNIIPLPQTDG
EREEVELINSGVPKLNKDSEPIPLGNIQPPEKESTEVTQTPPASTNPFETKSDEEEEEES
SLQDQGEDDEAFVVADLNDRLMFLKQRSRQGIAIDEDEAEAFELQPLRADEALRTLAALR
QLLIRHISSQEDSERDIERGQAQEDGRRTNSQQGTEDSTAIGSSVENGSERDETRRQNPP
EPPPGDTGFFETSEDCGSYMVLEGYGGSVESCTDDDVHGSNGDPVAGGDSGIDLKKLLSS
SSQSSEGPHINRQIMTHIRLLHANLQHLKDIEIKYNQVRQRLSEETATDTEENKDKS
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacacagtccacgcttgctgagaggtttcccaaaaaagcgagcaggacagga
agtattctcagtaaggaccatcccccagacaagaagcctaagagcgacaaggcatcagtc
ctcccctcgcacgaatttgaccccacagagctgcctgtacaaagtgtagtagtggatgga
agagcagagtcgtgtgggcttgtgcagcgttgtgttatcatccagaaagatgagaatggc
tttgggctgacagtcagcggagataaccctgtgtttgttcagcttgtgaaagaggatgga
gctgccatgcgcgctggggttcagactggtgaccggatcataaaggtcaacgggacatta
gtaacacattcaaatcatgtagaagttgtaaagcttataaaatcgggttcctatgtggct
ctgacggtgttggggagaccgccagggctgcctcagatctccctgtcggacggtgaaggg
gaagaggggtctctctcctcgctcaactcccctcattccccaggacccactggcccagat
cgttcctcttcatcccccagcccatcagagcgcaaagccgtcccgtctgtatgggcaatg
acggaggattacagcaggaaccctacagctaaactactgaaggaaatccaggaaaacaag
aagcacatcccacagctcccggagcatctcaacaaaaccgctggacaggatggctcctta
tctccaagaccaggtgaaggagtgctagaggatggagggggagatttggaacgaccccct
tcctggcacggcgatcctggaacggagtcatcctggaccaacagcacaacaacccctgtc
actcctagtccattcccagagagcccatgccaaagagaaacccccggccacagcccaaag
accacacctcgcgacagcctcaactcctgcccttcaccagatgctgaagacacgactgac
ttagactctcagtcaaatgtgggaagcccctgcttgcgtctgccccctcagatcatcggt
gctgaggatgatgactttgacacagagcatgaacagatgaatggccagtgcagctgtttt
cagagcatagagctgctgaagtctcggcctgctcacctggcagcttttattcatcatgtg
gtctctcagtttgaccctgcaccgctgttgtgctacctctacgctgaactttacaagcag
agcagctccaaagagacacggcgtatcctcatggagaccttcattatagaaaaaaatgct
agtttaaaagtgacagtacctgaatccatcatagctgacctggagcggaccgcacactca
aataacacagagcggaaaaggccggagcccatctcggaggacgtctatagagagtacgtc
cagcggctgcaggacacgcttctccctgacattcagaaacatcttgaagatttcaggcac
aagcgaagtatgggtctgacactggctgaagcggatctgacccgactggacactgagaga
atgagagaccgggtggctctggaaaaagagcgatcctgtgcagaacacatcatctctatg
atagagcaagtactgttgacgccacaagccacagaggaagataagtgtagcactattcag
tttgtcatactgtcgtatatgaagcagttgggcgtaaaagtgaagcacaagcccaagcta
atgaatcttttccctaagataaagaagagtataaagccggagaaagacggaagcgaggac
aaacctaaaaaacaacgaatttctagtgtcttccttccaagacgaccgagcaggactgaa
gcctttttacaaaacaaggttccagagctaaggcagcgtctccagaagcctcagctgccg
ttgggtgtaggggagcagggagatgcgtcatcccctccagtgcggggcagtcagtccagt
gatggctcagatggcaccaatgccccgctcatgtcacctccttacagtgccccagcggca
cagggcatagactgcaactatcgggagtctgacactgctgcagttccatcttcagcactg
cccagattgggagctggcatcaattcggcagacttgcaggactcgtatcctgtaaccact
cattttgacttcagcccctgtaccttagagcatctacaggaggaggagtctgagatagac
aagacgcaagacactggcacacccaggcctgacaggagaaggatggagatgttgggctct
ggagaagttcaaagtgaagatgatcagtgtgctgaggctgagctggagcatcccaactgg
cagacgctggtgagcaaagacgttctgtccacactcacccatcaggaaatcaagagacag
gaggtcatcaacgagctgttttacactgagagagcacatgttaggatgctgaaggttctg
gataacgtgttttaccagccgctgaccagagaggccatccttcctccagcagacatcaaa
aatatcttcaccaatctcgaggagatcgtacagttgcacgtgtcattaactgaacaaatg
acagccgttcgaaagaagaatgaggcagccgtcattgactcgataggagatgaactgctg
tcctggttcagtggggaggaggaagagaagatcaagagagcagccggcacatactgcagc
aatcaaccttttgccctggagctcatcaaaagcaaacagaagaaagaccaacgcttcaac
tctttcatacaggaggcagagagtaatcggcattgccggaggttgcagttgaaggacatc
attccagtggagacacagagactcacaaagtatccgcttctgctggagaacatcgccaga
tacacagaggaccccgaggagagaagtaaagtgaaacatgctttcgattgctgtcgaaag
attctcagtcacgtcaaccaggaggtgaaagaagccgagaacaaacagaggttggaggac
taccagaggcgattggacctgtcctcactgaagcagagcgagaaccccatgatcgctgag
ttcaagagcctggacttgactaagagaaagatggtgcatgaaggacctctatcctggaaa
gtcaacagagacaaaactattgagctatacacgctgttgctggaggatatcttggtgcta
cttcaaaggcaagatgagaagctgatcttaaagtgtcacagtaagaatctggcaggcaca
gcagagaccaaacacatcttcagccccatcatcaagctcagcactgtgatggtgcgctca
gtcgccaccgataacaggtcgttctttgtgctgtctatgtctgataatggagcccagatc
tacgagctgatggctcagaccgtatctgagcagaggacgtggcagtatcaaatcacacac
cgagccgattgcatgaagaccaaattgcacaacatcattccattacctcaaaccgatggt
gaacgtgaagaagttgagttgattaattctggtgttccgaaactcaacaaagactccgag
cccattcctttggggaatatccagcccccagaaaaagaaagcactgaggtcacgcaaacc
cctccagcgagcaccaacccgttcgagaccaaatccgatgaggaagaggaggaagaaagc
tcattacaagatcagggtgaagatgatgaagcattcgtggtggctgatctgaatgacaga
cttatgtttctgaaacaacgctccaggcagggcatcgccatagatgaggatgaggccgag
gccttcgagcttcagccgctccgagctgacgaagctctcagaacgttggcggcgctgaga
cagctgctgatcaggcacatttccagtcaggaggactcagagagagatatcgagagagga
caggcacaggaggacggacggaggacgaactctcagcaggggacagaggacagcactgca
attgggtcctcggttgagaatggctcagagagagacgagacaagacgacagaaccctcca
gaaccgcctcctggagacacggggttctttgagacgtccgaggattgcggtagttacatg
gtgctggagggttacggaggttcggttgaaagctgcacagatgatgatgtgcatggcagt
aatggtgatccagtggctggaggagactctggcattgacttgaagaagctcctctcttct
tcatcccagagcagcgaaggaccacacatcaacagacagatcatgactcacatacgtcta
ctgcacgccaacctgcagcacctgaaggatatagaaattaagtataaccaagtacgccaa
aggctatcagaggaaacagctactgacacagaagaaaacaaagataaaagttag
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integrated database retrieval system
