KEGG T09481: 129440912

Misgurnus anguillicaudatus (oriental weatherfish): 129440912

Entry

129440912         CDS       T09481

Symbol

polr2j

Name

(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a

K03008

DNA-directed RNA polymerase II subunit RPB11

Organism

manu Misgurnus anguillicaudatus (oriental weatherfish)

Pathway

manu03020

RNA polymerase

manu03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:manu00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    129440912 (polr2j)
  09124 Replication and repair
   03420 Nucleotide excision repair
    129440912 (polr2j)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:manu03021]
    129440912 (polr2j)
   03400 DNA repair and recombination proteins [BR:manu03400]
    129440912 (polr2j)
Transcription machinery [BR:manu03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     129440912 (polr2j)
DNA repair and recombination proteins [BR:manu03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      129440912 (polr2j)

SSDB

Motif

Pfam:

RNA_pol_L_2 RNA_pol_L SHNi-TPR

Other DBs

NCBI-GeneID:

129440912

NCBI-ProteinID:

XP_073716468

LinkDB

Position

22:complement(4723906..4727945)

AA seq 130 aa
MDINMPKFAFPKVFFKRIQQLNVLIKLPFYRITIVKDTKVPNACLFTLNKEDHTLGNIIR
SQLLKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRV
AIKDKQEGIE

NT seq 393 nt +upstreamnt +downstreamnt
atggacataaacatgcctaaatttgctttccctaaggtattttttaagagaatacaacag
ctcaatgttctcattaaactacctttctacaggatcacaatagttaaggacaccaaggtg
ccaaatgcctgtctcttcacactgaataaggaggaccacacgttggggaacatcattcgg
tcacaactgctgaaagacccccaggtgctgtttgctggatataaagttccccaccctctc
gagcacaagattgtgatccgagttcagacaacaccagactatagtccacaagaagccttc
actaatgcgatcactgacttgatcagcgagctgtcacttctggaggagcgattcagggtt
gccatcaaagacaagcaggaaggaattgaatga

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