Misgurnus anguillicaudatus (oriental weatherfish): 129441206
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Entry
129441206 CDS
T09481
Symbol
skic3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129441206 (skic3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129441206 (skic3)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
129441206 (skic3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_17
TPR_14
TPR_11
TPR_19
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_9
TPR_6
PPTA
TPR_15
TPR_MalT
T7SS_EccA1_N
DUF6557
PknG_TPR
HAT_PRP39_N
Paired_CXXCH_1
Motif
Other DBs
NCBI-GeneID:
129441206
NCBI-ProteinID:
XP_073716319
LinkDB
All DBs
Position
22:complement(13141323..13385376)
Genome browser
AA seq
1567 aa
AA seq
DB search
MSRKEVKTELKRARDAIKNKEFKEVLKHCKDVLKLDKNNYNAWVFIGVAASELQQPDQAL
AAYRKATELEPEQLLAWQGLANLYDKSNQADSKAELLKVYQTLCTLYEMSDKTKWLEVSK
KLVEIYQSENNYLQVARVFQKLIQVKEGEEGVQNLELLELWMEMTRVLQSTVEDQDNETQ
QHLILAFERALELTVEVPSEAHRSLSENYIKFLSKLPHEVVKLKVICEGTLFLYPTYFYP
LEVLCEHYMKTGDCSEEAFHCFSRLSELDPGNSVAHFGLGVKALLEKKYEDAIRSISLGL
KQRCCSVIGLCNLSQAQLKMHRYSDSITSSSQGLKLSVGKCDDWTRNLQRLKLEALVRTG
REQDAEEALQILAQISNVSKDPVLLALQGRALLQKDYREEAFQVSLELLSSHPGFVEGLT
LKGLIHVAQNEHNQAEESFLEALSRSPENGEIYFLLGHLYWNMREETQRDRKRSYTHLLK
AAKLDPYLCSVFRFLGHYYRDVAKDQGRAIGCYRRAFELDSTDEESGAAAVDLSMEQGDM
EGALTVLQSVTETAAPGSNKWAWLRRGLFHLKIGQHQQAIADLQAALKADPQDWLCWECL
GDAYLNRRSFTAALKTFAKAYVLQPTSIYSLYKTASIKQILGQFKDATVAYKQILKQEDY
VPALKGLGECLLALAKSALEDCLDGRAIYLIQSSIHYLFRAVQQRPDLSCLWKLLGDACT
SSKTVSPNQARVLVPGALCGMHPLDQSFKLDHRQLLTLGERCFGRALKLIPKAPSLWCDL
GLNYYYQFRLLSSLPGEDPQSLLEKALQCVKKAVMLDSSNHTYWNTLGVVALTKGIENFA
LAQHSFIKSVTAEPNNVVAWSNLGALYLKKGNIEFSHEAFKIAQSLEPLYVNCWIGQAII
AETVGSYDTMDLFRHTTELSTHTEGVKAYAYWVCSTLLDKSNRDSGLYLYNIVQMNAVLA
AQVALSKYTERIQVDPDAFIMLGYLNTHLQLKKQATESYHRAVKLLQALPYTEKLSFALR
CYGCALSNDGQYEEAMHIYSSTPMEVLHDVIGLALACFRTGRLPESILAYEKALAVASTE
KGKAYIFSALALIQHRLDSLVNAKTLLFKCSMLKVPVPESLQSLCALGLVHGDLTLASAT
LAELLKMGEPIGGAVEECCLLTCTLLALQGKYNEVHREAARAIHRNPGNSSLWALLSRLV
PQYCPNKAEGGAVAGCVACHASFSLGKRALLYSGVNHLASGCHSIKDRRQNALKTIQKAV
LLCPEDPAGWAGLMAACHTENTVSLLRGATPQREGLERALMTLVSEKVKGLQEEDGLLAQ
ALEGWVLQQAVTGFKQSGQYDQAEALCSQVLSVSPEHPVVFLMLRQVQCEHLLLSVTGNN
VPPAVMNQLSAAVMANHTSVFAWHWLAEVYRSQGLLTQASMVYRQSLQLASQLGDYNGKI
SSLLRLALMALIPCMAGVCVSEWQDLVLEACTEVLKIGSSPVNLLFQALLQFFVKLGGRE
TRRLLERIVYNSPSGTSETVLSVARWYLLRHLHTKDDLEQIDTLLMVGLEAEDTRLLDFH
RRLHPFS
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaaagaagtaaaaactgagcttaaacgtgcaagagacgcaattaaaaataag
gagtttaaagaagttttaaaacattgtaaggatgttctcaagcttgataagaataactac
aatgcatgggtgttcattggagtggcggcctcagagctgcagcagcctgatcaggccctg
gcagcctacaggaaagcaactgaacttgagccagaacaactgctggcatggcagggttta
gcaaatctgtatgataaaagcaaccaagcagattccaaagctgagctgttaaaggtttat
cagacgctttgcacattgtatgaaatgtcagacaaaacaaagtggttggaagtcagcaag
aaactggtggaaatctatcagtcagaaaataattatttacaggtggccagagtctttcag
aagttaatacaagtaaaggaaggtgaagagggagtgcagaatttagagttgctggaactt
tggatggagatgaccagagtgctgcaaagcactgtggaggatcaggacaatgagactcag
cagcatttgatattagcatttgagagagctttggaactgactgtagaagtacccagtgaa
gcccacagaagcctatcagagaattacattaaatttctttctaagcttccacatgaggtt
gtcaagctaaaagtgatatgtgaaggcacactgtttctctatccaacctacttctaccct
ctagaggtcctctgtgagcactacatgaaaacaggtgactgtagtgaggaagctttccac
tgcttcagccgtctctcagagttagatccaggcaactcagttgctcactttggccttggt
gttaaagctctgttggaaaaaaaatatgaggatgctatcagaagtattagtttgggactg
aaacaaaggtgctgttccgtcatcggattgtgtaatctatcccaggctcagctaaaaatg
catagatactctgacagtatcacatcttccagtcaagggctaaagttgagtgttgggaaa
tgtgatgattggacacggaacctacaaaggttgaaattagaggctcttgtaaggactgga
agagagcaggatgctgaggaagcactgcagatacttgcacagatttcaaatgtcagtaag
gacccagtgcttttagctttacaaggaagagctcttctgcaaaaagattatcgtgaggaa
gcatttcaggtttctttggagctgctgagctctcacccaggatttgtggagggtctcacg
cttaaaggactaattcatgttgcacaaaacgaacacaatcaggctgaggagagctttttg
gaggctttatccagaagcccagagaatggggagatttacttcctgttgggacatctgtac
tggaacatgagagaggagactcagagggaccgtaaaagatcctacacacatttactgaag
gctgctaaactggacccctatctttgttcagtgtttcgttttcttggccattactacagg
gatgttgcaaaagatcagggcagggccataggctgctataggagagcttttgagttggat
tccactgatgaagagtctggagctgctgctgtggacctgagcatggaacagggagacatg
gaaggggccctgacagttctgcagtcagtgactgagacagccgctcctggctctaataaa
tgggcctggttaagaagaggtctctttcacctgaagattggccagcaccaacaggcgatt
gcagatctccaggcagcattgaaggctgatcctcaggactggttgtgctgggagtgttta
ggtgatgcttaccttaatcgcaggagtttcacagctgctctaaagacttttgccaaagca
tatgtcctgcagcccacctccatctacagcctctacaagactgcctccatcaaacagatc
ctgggacagtttaaagatgccactgtggcgtacaagcagattttgaagcaggaggactat
gtgccagcacttaaaggtctgggggaatgcttgttagccttagctaaaagtgcattggaa
gactgtctagatggcagagcaatatacctgatacagagttccatccattacctttttaga
gcagtccaacagaggccggacttgtcctgtctgtggaaattacttggtgatgcctgtacc
agctctaaaactgtgtccccaaaccaagctagagttttggtacctggggctctgtgtgga
atgcatccactggaccaaagcttcaaactggatcatcgacagctcctcactttaggggaa
aggtgctttgggcgtgctttgaaactgataccaaaggcacccagtctgtggtgcgacctt
ggcctaaactactactaccaattcagactgctcagctctcttcccggagaggaccctcag
tccttgcttgagaaagccctacagtgtgtaaagaaggcagtcatgttggacagttccaat
cacacatactggaacactcttggagtggtagccttgacaaagggaatagaaaactttgct
cttgcacaacacagttttatcaagtctgtaacagctgagccaaataatgtggttgcatgg
tcaaaccttggtgctttatatttgaaaaaaggaaatattgagttctctcatgaagctttc
aagattgcacagtctctagagcctctgtatgtgaactgttggattggtcaggcgataatt
gctgaaaccgttggaagttacgacactatggaccttttcagacacaccacagaactgagc
actcatactgagggtgtgaaggcttatgcatactgggtttgttccacactgctggacaaa
agcaacagagactcaggactctacctctacaacatagtccagatgaacgctgtcttagct
gctcaggtggctctgagcaagtacaccgagagaattcaggtggaccctgacgccttcatc
atgctcggatacctgaacacacacctgcagctaaagaaacaggccactgaatcatatcac
agagctgtaaagctgcttcaggcactcccttacacagaaaagctcagttttgctctgagg
tgttatggatgtgccctcagcaatgatggccagtatgaagaagcaatgcatatttattcc
tccacaccaatggaggtgctgcacgatgtcatcgggctagcactcgcttgctttagaact
ggtcgcctgccagagagcattttggcgtatgaaaaagcccttgcagtggcttctacagag
aagggaaaggcgtatatattcagcgcacttgctttgatacagcacagactggatagcctg
gttaatgccaaaactttgctctttaagtgctcaatgctgaaagtgcctgtcccagagagc
ctgcagagtctgtgtgctcttggtttagttcatggggacctaacccttgcaagtgctaca
cttgctgagttgctaaagatgggagaacctataggtggtgctgtggaggaatgctgtctg
ctcacctgcaccctgctggccttgcaaggcaaatataatgaagtacacagagaggctgct
agggctattcacaggaatccaggaaattcatctctttgggctcttctctccagactggtt
ccacagtactgtcccaacaaagctgaagggggtgctgtggctggctgtgtggcatgtcat
gccagcttctctcttggaaagagggcattgctgtacagtggagtaaatcacttggcttcc
ggctgtcactccataaaggacagaagacaaaatgctctgaaaacaattcaaaaagctgtg
ctgctgtgtccagaggatcctgctggatgggcgggactgatggctgcctgccacacagaa
aatactgtgtccttactcagaggcgccacacctcaaagagagggtctcgagagagcactt
atgactctggtgtctgagaaagtgaagggcctgcaggaagaggacggactccttgctcag
gctctggagggttgggtgctacagcaggctgtgactggatttaaacagagtggccaatat
gaccaggcagaggctctatgttctcaggtgctgagtgtatcaccagagcatcctgtggtg
tttctgatgttgaggcaggttcagtgtgagcatttgctgctgtcagtgactggtaacaat
gttccgcctgcagtgatgaatcagctgagtgctgctgtcatggccaaccatacctctgtg
ttcgcctggcattggctggcagaagtgtaccgatctcagggtctgctgactcaggcctct
atggtttacagacagagtcttcagctcgcctctcagctgggtgattacaatggaaagata
agcagtctgctcagactggccctgatggcacttatcccatgtatggctggagtatgtgtc
tctgagtggcaggatctggtgttggaagcctgcactgaagtcctaaagatcggcagctct
ccagtaaatctgctctttcaggccttactgcaattctttgtcaagttgggtggaagggaa
acccggcgtttgctggagaggattgtgtataattcaccctcagggacttctgaaactgtg
ttatcagtggcacgctggtacctcctgcgccacctgcacaccaaagacgacctggagcag
atagatactctgctgatggtcggtttagaagcagaggacaccagactgctggatttccac
agacgccttcacccatttagctga
DBGET
integrated database retrieval system
