Misgurnus anguillicaudatus (oriental weatherfish): 129441541
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Entry
129441541 CDS
T09481
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129441541 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
manu03041
]
129441541 (prpf38b)
Spliceosome [BR:
manu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
129441541 (prpf38b)
Complex C
U4/U6.U5 tri-SnRNP related factors
129441541 (prpf38b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PBP_like_2
Motif
Other DBs
NCBI-GeneID:
129441541
NCBI-ProteinID:
XP_055057199
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All DBs
Position
2:complement(5550822..5560616)
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AA seq
488 aa
AA seq
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MAVSQQQQQAASKPAGGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTYHE
VVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQ
VMGLITHTDSPYIRALGFMYIRYTQPPADMVDWYDEFLDDEEELDVKAGGGCMMTIGEML
RSFLTKLEWFSTLFPRIPVPVQKSIDQHMKSRPRKPPQKDEQEEEEPADSGKHGDRLHSR
TPRRSQSPGRSQNRSRSRSRHRERRGASFDRELEKERDRQRKEREGKDRDKDRDRDRERE
KDRERRRSRTPDRTAERKRSRSRERRRSISPSRERRKERERDSETERSRRKDRDHHKERG
ERERDGERAKDKRSKGETDERRHKEEKEDRKHRDEKRSKRSRSRSRDKKHRTERSSKKRS
RSGSKTRQEAGDERNRKREHSHSKERLHKRSRSKERSHRREPSNGRDHRRSHSPEAGERS
NSVRAETP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcggttagtcaacagcagcagcaggccgcgagcaagccggccggcgggaaacacggc
aatgttctgccgttatggggcaacgaaaaaactatgaacctgaacccgatgatcttgacg
aacgtactatcgtcgccgtacttcaaggtccagttgtacgagctcaagacgtaccacgag
gtggtggacgagatttactttaaggtcacacacgtggagccgtgggagaagggcagcagg
aagacggcgggacagacgggaatgtgcggaggggtgcgaggagtcgggacgggcgggatc
gtgtccacggcgttttgtttgctgtataagctgtttacactgaaactgactcggaagcaa
gtgatgggtctcatcactcacacagattcgccctatatcagggcactgggcttcatgtac
atcaggtatacacaacctcctgctgatatggtagattggtatgatgagttcctagacgac
gaggaggagttggatgtgaaggctggaggagggtgcatgatgacgatcggagagatgctc
cgctccttcctgaccaaattggagtggttctcaacgctgttccctcggataccggttcct
gtgcagaagagcatcgaccagcacatgaagagcaggccacgtaaacctcctcaaaaagat
gagcaggaagaggaggagcctgccgattcaggaaagcatggagaccggctccattccagg
actcccaggagaagtcagagccccgggagatcccagaaccgctccagaagtcgcagccgc
cacagagaacgacgtggcgctagcttcgaccgtgaactggagaaagaaagagaccgacag
cgcaaagaaagagagggaaaggaccgtgataaagacagagatagagaccgggaaagggag
aaagaccgggagcgacgacgctccaggacacccgaccgaaccgcagagcgaaaacgcagt
cgcagcagggaaaggcgccggagtatcagccccagccgtgagagacgcaaagagagggag
agagatagtgagacagagcgtagtcgcaggaaagacagagatcatcacaaagaacgaggg
gagagagagagagacggggagcgagcgaaagacaagaggagcaaaggagaaaccgatgag
aggcggcacaaggaggaaaaggaggatagaaaacacagggacgaaaagaggagcaagcgt
tccaggagccgaagcagagacaagaagcaccgaacggagcgatctagcaagaaacgctcc
cgctccggcagcaagaccagacaggaagcaggagacgagagaaacaggaagagggagcac
agccatagtaaggaacggctacacaaacgcagccgcagcaaagagcgctcgcaccgcaga
gaacccagcaacggtcgagatcatcgccggagccacagtcccgaagcaggagaaagatca
aacagtgttcgtgcagaaaccccctga
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