Misgurnus anguillicaudatus (oriental weatherfish): 129441832
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Entry
129441832 CDS
T09481
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129441832 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
manu03036
]
129441832 (chd8)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129441832 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
129441832
NCBI-ProteinID:
XP_055057519
LinkDB
All DBs
Position
5:complement(13249278..13280216)
Genome browser
AA seq
2539 aa
AA seq
DB search
MADPIMDLFDDTPLFNLDSLPEDAFSQGSSDPVEEALKLALGQVDPPADPGVPALADAVP
DPVPTPVPLQTLQQHQPTQEISISQTPISVQPVPQSSLSVAGNSSGAATVLLSSPVGVPV
SGAQVVTQQVQAQQIAAGQSGPKIVILKGPQGQTQVLQGVTGATGSPGKVTLARVLTGTP
LRPGMTVVSGGTVLNATSPGQGQVKVGSGVQRLVQTSNGPMKQVLLTSVPQSQAQTQPVQ
VQISTQSQLQPQSVQVQSQAQVSLQTQATAPGTTATIRPQGVTLSAVPQQGEAKRITLVL
QQPSQGGAGQAGTVTVGGSAAAGAGQQGQQPRLVLGSLPGKFVLQGGQLTALAQAKAGQT
GAQPKVLTIQLQVQQQPNQQGAKFQLVSGAANAGGSPQVLQISQGQGGQRVAVPLKLLLQ
PQLNAVSSAGGTVSVVKVINTSAAGSAASTNTTAASSGVRLAKVQEPVRRVETLCKQEKA
NRIVAEAIARAKARGERNIPRVLNHDELPPGQTAAALEGAVGAAGAKKKGGGGGGGGGSK
KKSPSAGGGKMVPGGDKKSKAKTPGTPVVGAGGSKSKCKTKLNTITPVGGKKRKRNGSSD
HSDVDLSPPVSPRTLEEDMSQKRRSNRQVKRKKYTEDLDIKITDDEDEMDADVDVTTPAV
STLHVQPMAGELQQELDGEGLPSMQFFVENPSEEDAAIVDKILSMRLTKKEVSPGQYINV
EEFFVKYKNYSYMHCEWASLDQLERDKRIHQKLKRFKTKQAQMRNLFQEDEEPFNPDYVE
VDRILDESHSVDKDNGEPVVYYLVKWCSLPYEDATWELKEDIDEGKVEEFRKIESRPARL
KRTPRPPASSWKKLDESREYKNGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQ
SIALLSEEFSAGVTGPFLIIAPLSTITNWEREFTNWTDMNAIVYHGSLASRQMIQQYEMY
CKDDKGHLIPGAYKFDALITTFEMILSDCPELREISWRCVIIDEAHRLKNRNCKLLDSLK
MLDLEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSEIEFLREFGDLKTEEQVQKLQSIL
KPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSFLSMGATHNSNVPNL
LNTMMELRKCCNHPYLITGAEEKIVAELRQVYDPLAPDFHLQALVRSAGKLVLLDKLLPR
LKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFV
FLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYE
REMLDKASLKLGLDRAVLQSMSGNKESSVNGIQQFSKKEIEDLLRKGAYAAIMDENDEGS
RFCEEDIDQILQRRATTITIESEGKGSTFSKASFVASENRTDIALDDPEFWQKWAKKADL
DMDTFNRKNTLVIDTPRVRKQTRQFSTLRGEGGELSDMDSDDDYQAHNSRQSRTSRRSDR
HSGGGYGRTDCFRVEKHLLVYGWGRWRDILSHARCKRRLSERDVETICRVILVFCLLHYR
GDENIKSFIWELITPPENGREPQALLNHSGLSIPVPRGRKGKRVKAQSSFDVQKVEWIRK
YNPDSLLVDDSYRKHLKHQCNKVLLRVRMLYYLKQEVIGEHADSVLRGADARDIDIWLPE
MEQQDVPSGWWDAEADRCLLIGVYKHGYEMYTTMRADPCLCFVERCGRPNEQDINAEQHA
VDPELGDAGDYDKYSEDPEFKPALRHTKDAYEEGDSLNADNEICVEDRSAPVQVESASSG
SSDLCYWPTSSSLTARLRRLITAYQRSYRREQLKIEAAEKGDRRRRRCEQATKLKEIARQ
ERQQSWQPYFRWTRREECDFYRVVSTFGVERIKKEADAQEGDEHYMDWARFRTFARLDKK
TDESLTRYFKCFMSMCRQVCHLRPARGDESQSMSQPLAPITEERASRTLYRVSLLCRLRE
RVLPHPSLEERLALAPPSSDLPNWWSIPQHDHELLLAASRHGVSRTELSIFADPQYTFSQ
ARLDYLQNQQAQAASQTLAFSQSQELTNIKEEGLDDGSRLVGTDTLCHSDSLATHFPHSE
GKIGGQAGWGWKPSKHAGSSGKKGERSEAASDSDSDSDSGSSSSSRNSGSSDDSGDSDAE
REQAAALKMCDGDEENSILSLTASQDGAPPESLTDPLRVDWPKDRALINRIDNLCYLVIT
GHWPSGRRYIPETQLSGATEDHDLGGDLGYPRVARKSNSALSAEAVEGQDTEFTVKLLKE
EGLKLTFSKQALMPNGEDSGRKKRKDQELIGAEGVHHAPRRRDLPNWLKENPDYEVEGDM
LELLVNRTKRKRRRKKVEIGAVLTGSERVKVIDLRTGKKFGGIYGPALQDLREHLEENPN
HAVTAEWSETVRGSGFLPESLFHRLLTPHSSIPKKSRHYLSTPSIQSDDPLLGGGEGETL
VSDGAYMMDDEDLEDDGHLASSHHFLTPAYDVKMEPSALDMDEGDSLSQGGYDSSDREAI
LDDVIMAPKNSDSSSSSED
NT seq
7620 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccattatggacctttttgatgacacgccactgttcaatttggattccctg
ccagaggacgccttttcccaaggctcctcggacccggtcgaggaggcattgaagttggcc
ttgggccaagtcgacccacctgcagaccccggcgtgcctgcgctcgctgacgccgtacct
gatccggtcccaacgcctgtcccgcttcaaactcttcaacagcatcagcccacccaggag
atctccatttcccaaactccaatttccgttcagccggtgcctcagtcttctctctctgtg
gctggtaacagcagcggggcagcaacagttttgctgagctcccccgttggagtacctgtg
tcaggcgctcaggtcgtcacccagcaggtacaggctcagcaaattgctgcggggcagtcg
ggccccaaaattgttatattaaagggtcctcaaggtcagactcaagtgctccagggtgtc
acaggtgccacaggctctccagggaaagtcaccctcgccagagttctaacaggaacccct
cttaggccaggaatgacggttgtttctggggggacggtattaaacgcgacatctcctggt
caggggcaggtgaaagtgggctctggggtccaaaggctggttcagacttcaaatggccca
atgaagcaggtgttattgacctctgtgccccagtcacaggcgcagacgcagcctgtgcag
gttcagatatccacgcagagtcagctgcagccacagtccgtccaagtgcagtctcaagcg
caggtgtcgctacagacgcaggctacggcacccggaacgacagcaaccattcgacctcaa
ggtgtcaccctctcagcggtgccacagcagggtgaagctaagaggatcactctggtgcta
cagcagccctcgcagggtggagccggccaggccgggacggtgacggtagggggatctgcg
gctgcaggggcaggtcaacaaggccagcagcccaggctggtgttgggctctttgccaggg
aagtttgttttgcagggagggcaactgacggctcttgcacaagccaaggcgggtcagacg
ggggcgcagccaaaagtgctcactattcagctgcaagtgcaacagcagcccaaccaacag
ggagcaaagtttcagttggtttctggagcagctaatgctggtggcagccctcaagtgttg
cagatatctcaaggacagggaggacaaagagtggcagtgcctcttaaactactcctgcag
ccacagttaaacgcggtctccagtgctggtggaaccgtttccgtagtgaaagttatcaat
acctcggctgccggctctgcggccagcacaaacactacagctgcgtcttccggtgtgcgt
ctggcaaaggtccaggagcccgtgcgacgagtggagaccctgtgcaagcaggagaaggcg
aatcgcatcgttgccgaggccattgcgcgggccaaagccagaggagagaggaacatccct
cgcgttctcaaccatgatgagcttcctcctggacagaccgcggcggccctggagggtgcc
gtgggagctgccggagccaaaaagaaaggaggaggtggtggcggtggaggagggagcaaa
aagaaaagcccgagcgcaggaggaggaaaaatggtcccgggtggagacaagaaatcgaag
gcgaagactccgggaactccggttgttggagctggaggcagtaaaagtaaatgcaagact
aagctgaacaccatcacgcctgtgggtggtaagaaaaggaaaagaaatgggtcctctgac
cactcagacgtagatcttagcccacctgtttcgccccgcacgctagaggaggacatgtca
cagaaacggcgctctaaccggcaagtgaagagaaagaagtacaccgaggatttggacatc
aaaatcacagatgatgaggatgaaatggatgcagatgttgacgtgaccacacctgccgtg
tctactctacatgttcagcccatggcaggggaactccaacaggagctcgatggggaaggt
cttccaagcatgcagttttttgtggagaacccaagtgaggaagatgctgctattgtggat
aaaattttatctatgcggttgaccaaaaaagaggtttcaccagggcagtatattaatgtg
gaggagttctttgtcaaatacaaaaactactcatacatgcattgtgagtgggccagtctt
gatcagctggagagagataagaggatccatcagaagctcaagaggttcaagaccaaacag
gcacagatgagaaatctctttcaagaggatgaggaacccttcaatccagactatgtggag
gttgatcgtatcttggatgaatcgcatagtgtcgataaggacaatggagagccggttgtg
tactacttggtgaaatggtgctcactgccctacgaagatgcaacttgggagctgaaggaa
gacattgatgaaggaaaagtggaagaatttagaaagattgaaagtcggccagcacgcctc
aagagaacccctcggccacctgccagttcctggaagaagcttgacgagtcaagggagtat
aaaaatgggaatcagcttcgagagtaccagctggaaggagtcaactggttgctcttcaac
tggtacaacaggcaaaactgcatccttgcagatgaaatgggtcttggcaagaccattcag
tccatagctctcctgtctgaggagttttctgcaggcgtcacggggccgttcctcattatt
gcgcctctgtccaccatcacaaactgggaaagagagttcaccaactggactgatatgaat
gcaatcgtttaccacggcagtctggccagccgacagatgattcagcagtatgagatgtac
tgcaaagatgacaagggacatttgattccaggagcttataagtttgatgctctcatcaca
acctttgagatgattctgtcagattgccctgagctgagggagatttcgtggcgatgtgtt
attatcgatgaagctcaccgactgaagaacagaaattgcaaactgctggacagccttaag
atgcttgaccttgagcataaagtgttgttgacaggaacgccattgcaaaatacagtagag
gaactcttcagccttctgcacttcctggaaccagctcagtttccctctgaaatcgagttt
ctccgcgagtttggagatcttaaaacggaggaacaggtccagaaactgcagtctatcctg
aagcccatgatgctgcgtaggctgaaagaggacgtagaaaagaacctcgccccaaaacag
gagaccattatagaggtggagttgactgatgttcaaaagaagtattaccgtgctattctg
gagcgtaacttcagcttcctcagcatgggagccacacataacagcaatgtgcccaatctc
ctcaacaccatgatggagcttcgaaagtgttgcaaccatccttacctcattacaggagct
gaggagaagatagtggctgagctgaggcaggtttatgatcctctggctccagacttccat
ctccaggctcttgtgcgctctgcagggaaactggttttgctggataagctacttccacgc
ctcaaagccggtggacacaaggtgctcatcttctcccagatggtgcgctgccttgacatc
ctcgaggactacctcatacacaaaagatacctgtatgagcgcatcgatgggcgggttaga
ggaaacctgcgccaggcggccatcgatcgctttagcaaaccagattccgaccggtttgtc
ttcctgctttgtactcgtgctggagggttgggcattaatctaactgctgctgacacctgt
gtcatattcgactcggactggaacccacagaatgatcttcaggctcaggctcgttgtcac
cgtatcggtcaatctaaagcggtgaaggtatatcgtcttatcaccaggaactcttacgaa
agggagatgttggacaaagccagtcttaaattggggcttgatcgagctgtcctacaaagc
atgagtggaaacaaggagagcagtgttaatgggatacaacagttttccaagaaggagatt
gaggatttactccgtaaaggtgcttatgctgccataatggatgagaacgacgagggcagt
cgcttttgtgaggaggacattgatcagatcctccagagaagggccactaccatcaccata
gagagtgaaggaaagggatccaccttctccaaggccagcttcgtagcgtctgagaaccgc
actgacattgctttagatgaccctgagttttggcagaagtgggccaagaaagcagattta
gacatggacactttcaacaggaagaacacactagtgatagacacgccaagagtgagaaag
caaacgcgtcagttttccactctacgcggagagggcggtgagctgtctgatatggacagt
gatgacgactaccaagcacataattctcgccaatcccggacttcccgacggtccgaccgg
cattccggcggaggctatggacgtacggactgcttccgagtggagaaacacctacttgtt
tacgggtgggggcgctggagggatatcctgtctcatgctcggtgtaagaggcgactcagc
gagcgagacgtggagaccatctgccgggtgatcttggtcttctgtctacttcattatcgt
ggagatgagaacatcaagagcttcatctgggaactgatcacgccgccagagaatggacga
gaacctcaagctctgcttaaccattctggtctgtccatccctgttcctcgtggcaggaag
ggcaaacgggtgaaggctcagagctctttcgatgtgcagaaggttgagtggatccgcaag
tacaatcctgacagtctgctcgtggacgacagttatcgcaagcacctcaagcaccagtgt
aacaaagtcttgttgagagtacgcatgctttattacctgaagcaggaggtcatcggagaa
catgccgattctgttttgagaggagctgatgcaagagatattgatatctggttacctgaa
atggagcagcaggatgttccctccggttggtgggacgcagaagccgatcgatgcttgctt
atcggagtttataagcatgggtatgagatgtacaccaccatgcgtgctgacccctgcttg
tgtttcgttgagcgatgtggacgcccaaatgagcaggacattaatgcggagcagcacgca
gtagacccagagcttggggacgctggggactacgataagtactcagaggatccagaattc
aaacctgcgttgagacacaccaaggatgcatatgaagagggtgattcgctgaatgcagac
aatgagatttgtgtggaggatcgctccgcacccgttcaggtcgaaagtgcttcctcagga
tcctcagatttgtgttattggccaacaagctcatcgctgacagctcgactgcgtcgcctt
atcacagcgtatcagcgcagttacagacgagagcaacttaagatcgaagctgcagagaag
ggcgatcgaagacgtagacgctgtgaacaagccaccaaactcaaagagatagcccgacaa
gaacggcaacaaagttggcaaccctatttcaggtggacccgtcgggaggaatgtgatttt
tacagggtggtatcgacctttggagtggagaggataaagaaggaggccgacgctcaagaa
ggggatgagcattacatggactgggcgcgtttccgtacgtttgctcggcttgataagaaa
accgacgagagcttgacgcgttacttcaagtgcttcatgtctatgtgtcggcaggtgtgc
caccttcgaccggcacgtggtgatgaatctcaaagcatgtcccagcccctagcccccatc
acagaagaaagagcctcacgcacactttacagggtcagcttgctgtgccgactacgcgag
cgcgttctcccccatccgtcgctggaggaacgtctcgctctggcgccacccagctctgac
ctgcccaactggtggagcatcccacagcacgaccacgagctgctcttagccgcctccaga
cacggagtcagtcgcaccgaactctcgatcttcgctgacccgcagtacacgttcagccaa
gcccgcctcgactacctccagaaccagcaagcccaagcggcctcacagactctcgcattc
agccaatcgcaggagctgaccaatatcaaagaggaggggctagacgatggctctcggcta
gtggggacggacaccctgtgtcactcggactccctggccacgcacttccctcactccgag
ggaaaaattggagggcaagctggctggggttggaaaccgagcaaacacgcagggtccagt
gggaagaaaggagagagaagcgaagcggcctcagactcggattccgattcagactcgggc
tcgtcgtcgtcttcgcgtaattcgggcagctcggacgacagcggagacagcgatgcagag
agagaacaagcagcagctcttaagatgtgtgatggcgatgaagagaacagcatcctgtca
ttgacagcgtcccaagacggcgccccaccagagtcccttactgaccctctcagagtcgac
tggcccaaagatcgcgcgttgataaaccgaatagataacctctgttacctcgtaataacc
gggcactggccatcaggccgccgttacattcccgaaactcagctcagtggcgcgactgaa
gaccatgaccttggaggtgacctgggttacccccgagtggcacgtaaaagcaacagcgcc
ctgtctgcggaggccgtcgaaggccaagatacagagttcacagtaaaactcttgaaggaa
gagggtctgaagctgacgttctctaagcaagctctgatgccgaatggggaagacagcgga
cgcaagaaacgaaaggaccaggagcttataggtgcggagggagttcaccatgctcctcga
aggagggaccttcccaactggctcaaagagaatccagactacgaggtggagggagacatg
ctagagctcctggtgaacaggaccaaaaggaagaggaggaggaagaaggtggaaattggt
gcagtacttacaggcagtgaacgagttaaagtcatagacttaaggacaggcaagaagttt
ggtggaatatatggccctgcactacaggacctgagggagcacctggaggagaatcctaac
cacgctgttaccgcagagtggtctgaaactgttcgcggctcgggcttcttgccagagagt
ttattccatagactgttgactccccattcttcaatccccaaaaagagccgacattacctt
tccaccccttcgatccagtccgatgaccctctcctgggaggtggagaaggcgagacgtta
gtttctgacggagcgtacatgatggacgacgaggacctggaagacgatggccacctcgca
tcatctcaccactttcttactcctgcctacgatgtgaaaatggagccgagcgctctggat
atggacgaaggtgacagtttgtcacaaggtggctacgatagctcagacagggaagccatt
ttggatgacgtcatcatggcacctaaaaattcagactcttcctcgagttcagaggattga
DBGET
integrated database retrieval system
