Misgurnus anguillicaudatus (oriental weatherfish): 129441881
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Entry
129441881 CDS
T09481
Symbol
copa
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129441881 (copa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
manu04147
]
129441881 (copa)
Membrane trafficking [BR:
manu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
129441881 (copa)
Exosome [BR:
manu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129441881 (copa)
Exosomal proteins of bladder cancer cells
129441881 (copa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
129441881
NCBI-ProteinID:
XP_055057594
LinkDB
All DBs
Position
5:complement(15418428..15432733)
Genome browser
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVDAE
VRGISGVDLFGASDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMLVFKLERERPAYAVYGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPRESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK
RSLATVKIAKVKYVVWSADANHVALLAKHAIMICNKKLDSLCNIHENIRVKSGAWAENDV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLNIDPTEYRFK
LALVNRKYEEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLTKLRKMM
KIAEIRKDMSGHYQGALYLGDVSERVRILKNCGQKSLAYLTAATHGMDEEAEALKETFDP
EKEVVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGKAGQMVADIDMDTA
GAEGWGEDAELHLDEDGFMDAQEGLGDDGAIGKEEGGGWDVEEDLDLPPELDVPSVGGGG
AEGEGFFVPPTKGTSPTQTWCNNSQLAVDHILAGSFETAMRLLHDQVGVVQFGPYKQIFM
QTLSRGHTCYLGLPSLPCLHSYPQRNWKDSGAKGGLPAVGLRLSDLISRLQQCYQLTTAG
RFEDAVERFRAILLSVPLLVVDNKQEIAEAQQLITICKEYIIGLSMETERKKLPKDSLDD
QKRLCEMAAYFTHCSLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKQEVAQQ
TRKILAACEKSLTDAHQLNYDPHNPFDICAASYTPLYRGRPVEKCPLSGACYCPKYKGEV
CRVTQVTQIGKDVIGLRVSPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaaatttgagacaaagtcggcccgagtgaaaggactaagttttcaccctaaa
aggccctggattcttgccagtctgcacaatggagtcatccagctgtgggactatcgcatg
tgtaccctcatcgacaagtttgacgagcatgatggtccagtcagaggtattgactttcac
aagcagcagcctctgtttgtgtcaggaggcgatgactacaagatcaaggtctggaactat
aaactgcgtcggtgtcttttcactcttctgggacatcttgactacattcggaccaccttc
ttccaccatgagtatccctggatcctgagtgcctctgatgatcagaccatccgcatttgg
aactggcagtccagaacttgtgtctgtgtgctgactggccataatcactacgtgatgtgt
gctcagtttcatccctctgaggacctggtggtgtcggccagcctggatcagactgtgcgc
gtgtgggatatttctggtctgaggaagaaaaatctgtctccgggtgctgtggatgcggag
gtgcgcggcatctctggtgtcgatctgttcggggcatctgatgccgtggtgaaacatgtt
ctggaggggcatgatcgaggtgtaaactgggcagctttccatcccagcatgcctctcatt
gtatcaggggcagatgaccgtcaggtgaagatctggagaatgaacgagtcaaaagcatgg
gagttggacacctgtagggggcactacaacaacgtgtcctgtgcagtgtttcaccctcgc
caggagctcatcctgtccaactctgaggacaagagcatccgtgtgtgggacatgtccaag
aggaccggagtccagacctttcgcagagatcacgaccgtttctgggtgctgggagctcac
cccaacctcaacctgtttgctgctggtcatgacagcgggatgctggtgtttaagctggag
agggaacgtccagcgtatgccgtgtacggtaacatgctgtactacgtgaaggaccgtttc
ttgcgtcagctggatttcaacagcagtaaggatacagctgtcatgcagctgcgcagcgga
tcaaaattcccagtgttcagtatgtcttacaaccctgcggagaatgctgtgttgttgtgc
actagagccactaacctggaaaacagcacttatgacctgtactccatcccaagggagagt
gactcccagaatcctgatgctcctgagggtaaacgctcctctggcctgactgcagtgtgg
gtggccaggaaccggtttgcagtgctcgatcgcatgcactcgctcctgataaagaatttg
aagaatgagattgtgaagaaggtgcaggtgccgagctgcgaggagatcttctacgctgga
acaggatcactgttgctgcgggacgctgacggagtcacactctttgacgtgcagcagaag
cgatccctcgccaccgtcaaaattgctaaggtcaaatatgtggtgtggagcgctgatgcc
aaccacgtagccctgctggccaaacacgccatcatgatctgcaacaagaagttggacagc
ctgtgcaacatccacgagaacatccgagtgaagagcggtgcttgggctgagaatgatgtc
ttcatctacaccacttccaatcatatcaaatatgctctcacctcaggtgatcatggtata
atccgtaccttggacttgcccatctacgtgacaagagtcagaggcaacagtgtgtactgt
ctggatcgcgaatgcaggccacgagtgcttaacattgaccccaccgagtatcgttttaaa
ctggctctggtcaatcgcaaatacgaagaggttcttcatatggtgcgcaatgctaaactg
gtaggccagtccatcattgcctacctgcagaagaagggttacccagaggttgcgctgcac
ttcgtcaaggacgagaagactcgctttagcctggcactggagtgtggaaacattgaggtg
gcgctggaggctgcaaaagccctggacgaacgtagctgctgggagcgtctcggcgaagct
gctcttctccagggtcatcaccaggtggtggagatgtgctaccagcgaaccaagaatttc
gacaagctcacattcctgtacctcatcactggcaacctgaccaagctcaggaagatgatg
aagatagctgagataagaaaggacatgagcggacactatcagggcgctctttacctgggt
gatgtcagcgagcgtgtgcgaatcctgaagaactgtggacagaagtctttggcttacctg
actgctgccactcatgggatggacgaagaagccgaggccctcaaagagacctttgatccg
gaaaaagaagtggtgcctgaagtcgaccccaatgctcagctgttgcagccaccacctccc
atcaaccccctggacaccaactggcctctgctcaccgtttctaagggcttctttgaggga
gccattgctgccaaaggtaaagcaggacagatggttgcggatattgacatggatactgct
ggagcagaaggctggggagaagatgcagaacttcatttggatgaagatggattcatggat
gctcaggaaggtttgggagacgatggagctatcgggaaggaggaaggcggaggctgggat
gttgaggaagatctggacttacctccagaacttgatgtgccttctgtcggtggaggtggg
gctgagggagaaggtttctttgtaccgcccaccaagggcacaagccccacccagacgtgg
tgcaacaactctcagctggctgtggatcacatcttggccggctccttcgagacagctatg
aggttgctacacgatcaggtcggtgtggttcagttcgggccctataagcagattttcatg
cagaccctgtcccgcggtcacacctgttacctgggactgccgtctttgccctgcttgcac
agttacccgcagaggaactggaaggacagcggtgccaaaggaggcctgccagcggtgggt
ttgcgtctgtctgacctcatttcgcgcctgcagcagtgctaccagttgaccacggccggg
cgcttcgaggatgccgtggagcgcttcagggccatcctgctgtcagttccactgctcgtg
gtcgacaacaaacaagagattgcagaggcacagcagctgatcactatctgtaaagagtac
atcatcggcctcagtatggagacggagaggaagaaacttcctaaagattctctagatgat
cagaagcgactgtgtgagatggcggcatacttcacgcactgcagtctgcagcccgtccac
atggtgttggtgttgagaacggctctcaatcttttcttcaaactccgtaacttcaaaaca
gcagcgggattcgctcgccgtctccttgagctcggccccaaacaagaagttgcacaacag
acacgaaagattcttgcagcttgtgagaagagcctgacagatgcccaccaactgaactac
gacccccacaatccctttgacatctgtgcagcctcatacactcccctgtaccgtgggcgg
cccgtagagaagtgtcctctgtctggagcctgctactgcccgaaatacaaaggagaggtc
tgcagggtcacacaggtaacccagatcggtaaagatgtcattggattgcgcgtcagcccg
ttacagttccgttga
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integrated database retrieval system
