Misgurnus anguillicaudatus (oriental weatherfish): 129441943
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Entry
129441943 CDS
T09481
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129441943 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
manu04147
]
129441943 (copb1)
Membrane trafficking [BR:
manu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
129441943 (copb1)
Exosome [BR:
manu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
129441943 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
Cnd1
HEAT
HEAT_2
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
129441943
NCBI-ProteinID:
XP_073714958
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Position
21:30107789..30119739
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AA seq
953 aa
AA seq
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MTAAENVCYTLINVTNDSEPPSEVSLKADLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLTTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDNLRPLIIEKMLEVFHAIKTVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVENELKKEAGEVKPEEEVSAAPAPKLVTEMGTYVTQSALSTSRPSKKEEDRP
PLRGFLMDGDFYVAASLATTLTKVALHYVALTEEKKRQNSFVAEAMLIMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRRSLSHMLAVRLEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKNETASKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNIIELNEYLQHILNSTNMKCLTPEKALSGICGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVNGHIRIRAKSQGMALSLGDKINLSQKKMAS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgcagagaatgtgtgttacacccttattaatgtcaccaatgactctgaacca
ccatcagaagtcagcttgaaggctgatttagaaaagggggagatcaaagccaagacggag
gctttaaagaaggttatcatcatgatcctgaatggcgagaaacttccagggctgttaatg
accatcatccggtttgtcctgccacttcaggatcacacaattaaaaaactgctacttgtt
ttttgggagattgtacccaaaaccactcctgatggtaaacttcttcaggaaatgattttg
gtctgcgatgcctatagaaaggatctccagcatcccaacgagttcatccgtggctcaact
ctgcgcttcttgtgcaagttgaaggagtctgagctgctggaacccctcatgccagcgatc
cgtgcctgcctggaacatcgtcacagttatgtgcgtcgtaatgcagtcctggccatctac
accatctacagaaactttgagcatttgatcccagatgctccagagctgatccatgatttt
cttgtgaatgagaaggatgcaagttgcaagagaaacgcttttatgatgctgattcatgcc
gatcaggatagagctctcgactaccttagcacctgtattgatcaggtgcacacattcgga
gacattttacagcttgtcattgtagaactgatttataaggtctgccatgcgaacccttca
gagagagcacgattcatccgttgcatctacaacctgctgcagtcctccagtcctgcagtt
aaatatgaagcagctggcactcttgtcacactgtccagtgctcccaccgccattaaggct
gctgctcagtgctacattgatctgatcattaaagagagtgacaacaacgtcaagctcatt
gttctggatcggctgatcgagctgaaggaacacccaacacatgagcgagttctccaggac
ctggtgatggatattctgagagttttgaccacccctgatcttgaggtgcgcaagaagacc
ctacagttggccctggacctggtgtcatcccgcaatgtagaggagctggttatagtgctg
aagaaagaagtcatcaaaaccaacaatgtgaccgagcatgaggatacagacaagtacagg
cagctgctagttcgtactctgcactcgtgtagtgtgcgcttccctgacatggcagccaac
gtcatccctgtgctgatggagttcctgagtgacactaatgaggcggccgcagccgatgtg
ctggagtttgtgcgggaggctattcagaggtttgacaaccttcgacctcttatcattgag
aagatgctggaggtcttccatgccatcaagacggtcaagatttatagaggtgcactgtgg
attttgggggaatattgcagcactaaagaggacatccaaagcgtaatgacagaagtccgc
agatctctgggagagattcccattgtggagaacgagttgaagaaggaggctggagaagtg
aaaccagaggaggaggtgagtgcggctccagctcctaagctggtgacagagatgggcact
tacgtcactcaaagcgctctcagcacctccagaccatccaagaaagaagaggaccggcct
ccgctaagggggttcctgatggatggagacttctacgttgctgcctcattggccaccacc
ctcaccaaagtggccctgcattatgttgccctcaccgaagagaagaaaagacaaaattcg
ttcgtggcagaagctatgttgatcatggccaccatcctccatctgggcaagtcatctctg
ccaaagaaacctattactgatgatgatgtggaccgcatctcgctgtgtctcaaggtcctg
tccgaatgctcgcctctcatgaacgacatttttaacaaggagtgccgcagatccctttcc
cacatgctcgctgtcagactggaggaggagaaactgtctcagaagaaagagtctgagaag
cgtaacgtgaccgttcaggcagacgatcctatctccttcatgcagctcacggctaagaat
gagaccgcatccaaagaggatcaattccaactcagtctgctggcagctatgggtaacact
cagaggaaagaggctgcggacccgctggcctccaaacttaataaggtgacacagttgact
ggtttctcagatccagtctatgcagaagcatacgtccatgtcaaccaatatgacatcgtc
ctggatgtcctggttgttaatcagactagcgacactttacagaactgcaccttggagctg
gcgacacttggtgatcttaaattggtcgagaagccatctcctctcacattggctcctcat
gacttcgccaacatcaaagccaatgtaaaagtcgcctccacagagaacggcattattttt
ggaaacatagtgtatgatgtgtcgggagcagccagtgacaggaattgcgttgtgctgagc
gacattcacatagatatcatggattacatccaacccgccacctgcacagatgccgagttc
agacagatgtgggctgaattcgaatgggagaacaaggttactgtcaacaccaacatcata
gaactaaacgagtatctccaacacatccttaactccaccaacatgaagtgcttgacccca
gagaaggcactttctggcatctgtggttttatggcggcgaacctgtatgcccgctctata
tttggagaggatgcccttgcaaacgtcagcattgaaaagcccatccacttgggtcctgac
gccccagtcaatggccacattcgcatccgcgccaagagccagggaatggcattgagtctg
ggtgacaagatcaacctctcccagaagaagatggcctcataa
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