Misgurnus anguillicaudatus (oriental weatherfish): 129442001
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Entry
129442001 CDS
T09481
Symbol
tnr
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04510
Focal adhesion
manu04512
ECM-receptor interaction
manu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129442001 (tnr)
04518 Integrin signaling
129442001 (tnr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129442001 (tnr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
manu00536
]
129442001 (tnr)
Glycosaminoglycan binding proteins [BR:
manu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129442001 (tnr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Fn3_PBP1
Pur_ac_phosph_N
EGF_Tenascin
EGF_2
Fn3_Dep-1_2nd
FN3_Tor_3rd
Fn3_ROS1
DUF4998
DUF7949
DUF7359
Motif
Other DBs
NCBI-GeneID:
129442001
NCBI-ProteinID:
XP_055057751
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All DBs
Position
2:complement(19107547..19333788)
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AA seq
1347 aa
AA seq
DB search
MWGLNMAMQRSMLSLTLLFFGVQAVPNPTSKLVKTTRVRRQLPDDPSNQTQSMIFNHVYN
INVPPESLCSIDLDTIPGPGNKGTGEGDKFPTEYTEETVDSESQVTFTHRINIPKQACGC
PTITAIQQLANRIEMLEREVLVLRAHCSSGCCGESSVMGHLDFVPQCGGHGTFSMEICGC
VCEEGWTGKNCSEPRCPDDCSGQGICIEGECVCDRNFAGENCSEPRCPSDCSDRGLCIDG
ECVCEEAYAGEDCSQGRCLNDCSDQGTCVNGSCHCRPGFLGEDCSLIFCANNCSQKGVCK
DGFCACQEGYTGDDCASVSPPTHLRVQGVSEHTVDLEWEGSMILTDFLITYAPTTPGGVQ
LEIRVPGNVTNTTIKGLEPGLEYNINVYAVIDNIISAPMNTLVSTYLSNPDGLLFKSIME
TSVEVQWQPLDYLFDGWEISFIPKDNDGGMTAQLPSTITSFHQTGLKPGEEYTVNLVALK
DQGRSQPVTTTFVTLIDGPSQLIVRDVSDTVAFVEWTSPKAKVDKIILRYGLLGVDGPKT
TFRLPPTLSQYSLQVLRPGSTYEVSVSGIRNGNESEAIFTAFNTEIDAPKNVRVLSKTST
SLELEWDNSEADVESYSVVYSTLAGDQYDKVIVPRNDGYTTKTTLTDLLPGTEYGIGISA
VLGANQSTPATMNARTDLDVPLDLTVTASTDNTITLLWGTVQGPIDHYKVTYTSSAGVTT
ELTVPKDITITTLTGLEPATEYTITVAAQRGRQQSAAATIDAFTGFRPITQLYFSDVTSD
SLTVAWSSPAPPADAFILNYSPQDSSDDSEIALDGSKTKIALTGLLPSRRYTVSLVTMHG
NVSSEPVVGPVTTGMDPPRDLSVLYITEESATISWIQPLAPFDYYKMAYQSPKGRVDNVV
IDSDVTNYTLTNLHPATEYEIKLNAVKGSQESKIISTTVFTAMDIPAELTALNVTPQGAL
LRWNPPVSSVDNYVLTLTRNQVTADTFLVEGNKQEYQLSQLIPSTPYSVALYATKGPLTS
GTVIANFVTPMDAPHNLTASEINHRSALISWQPPIAEIDNYMLTYKAADGGRKELIFESE
DTWIRLEGLAETTEYTVRLQASRGLETSAIVSTTFTTGNRLFPTPQNCAQHLLNGETLSG
IYSIYINRDLSQGVQVYCDMTTDGGGWIVFQRRQNGLTDFSRKWSDYKIGFGNLEDEFWL
GLDNIQRIAAQGRYELRIDMKDGQETVYANYDRFSIGDSKSLYKLRIGEYNGTAGDSLSY
HQSRPFSTQDKDNDIAVTNCALSYKGAWWYKNCHRANLNGKYGESRHSQGINWYHWKGHE
FSIPFVEMKMRPFNYRSISGKRRRSTH
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgtgggggctcaacatggcgatgcaaaggtcaatgctgagcctgactctgctgttcttt
ggggttcaagctgttcctaaccccaccagcaaactagtaaagaccacgagagtgagacga
cagcttccagatgaccctagcaaccagacccagtccatgatcttcaatcatgtatacaac
atcaatgtaccgcctgagtcactgtgctccatagacctggacacgataccaggcccaggg
aacaaaggtaccggcgagggtgacaagtttccaacggagtatacagaagagacggtggat
tcggaaagccaggtgacctttactcaccgcatcaacatcccgaagcaagcctgcggttgt
cccaccatcactgccatacaacagctggccaatcgtatagagatgctggagcgcgaggtg
ttggtgcttcgggcgcattgtagctccgggtgttgtggcgagagctctgtcatgggtcac
ttggactttgtccctcagtgtggcggccatggcaccttcagcatggagatctgtggatgt
gtgtgtgaagaaggatggacgggaaagaactgctctgaacctcgctgcccagacgattgc
tccggccagggcatctgtatcgagggcgagtgtgtgtgcgaccgtaacttcgccggtgag
aactgttcagaacccagatgcccgagcgactgctccgacaggggtttgtgcatcgatggc
gagtgcgtttgtgaagaagcctatgccggtgaggactgctcgcagggcaggtgtctgaac
gactgctcagatcagggaacctgcgtgaacggaagctgtcattgccgcccgggctttcta
ggagaggactgttctctcatcttctgtgccaataactgcagccagaaaggggtgtgcaag
gacggcttctgcgcctgtcaagagggatacacgggggatgactgtgcttcagtgtcacct
cctacacatctacgagttcaaggggtgtctgagcatactgttgatttggaatgggagggg
tctatgatcctgacagactttctcatcacttatgcccccacaacccctggtggagtccaa
ctggagatcagagtacctggaaacgttaccaacaccaccatcaaaggtttggagccagga
ctggagtacaacatcaacgtgtacgctgtcatagacaacatcatcagtgcgcctatgaac
accttagtctccacctatctctcgaatccagatggtttactcttcaaatcaatcatggag
acatccgtggaggttcagtggcaacctttagactacttgtttgatggctgggaaataagc
ttcattcccaaggacaatgatggagggatgacggcacagctacccagcaccatcacatcc
ttccaccaaacaggactgaagcctggggaggaatacactgtcaacctggtggcactgaaa
gaccagggcaggagtcagcctgttactacaacttttgtcacattaatcgatgggccatcc
cagcttatcgtacgagatgtctcagacacagtcgcgttcgtggagtggacctcacccaaa
gccaaagtggacaagatcatattgcgatacgggctgttgggtgtagatggaccaaaaacc
acctttcgtctgccgccgactttaagccagtactcactccaagtcctgaggcccggatca
acatatgaagtatcagtcagtggaatccgaaatggcaatgaaagcgaagccattttcaca
gcatttaatacagaaatcgatgcaccaaagaacgtgcgagtgttgtcgaaaacatccact
agcttggagctggaatgggacaatagtgaagcagatgtagaaagctacagtgtggtttac
agcacactagctggagatcagtatgacaaggtcatcgtcccgcgcaatgacggctacacc
accaagaccaccctcactgatttactgcctggcacagaatatggcattggaatttcagct
gtacttggtgccaaccaaagcacaccagcaacaatgaatgcaagaacagatctggatgtc
cccttggatttgacggtcacagcctccacagacaacaccatcaccctgttgtggggcacg
gtgcaggggcctatcgaccattataaggtgacctacacctcctctgctggagttacgacc
gagcttacggtacccaaggacatcaccatcaccacactgacaggtctggagccggccacc
gaatacaccatcacggttgcagcacagaggggcagacagcaaagcgcggccgccacaatt
gatgccttcacaggctttcgccctatcacacagctgtatttctctgatgtcacatctgat
tcattgactgtggcttggagttcaccggccccgcctgctgatgcattcatcttgaactac
agtccccaggactcgagtgatgattctgagatcgctctagacggctccaaaacaaaaatc
gccctcactggtcttctgccctccaggcgctataccgtttccttggtaaccatgcacggc
aatgtgtcctcagaaccggttgtaggtccggttacaacaggaatggaccctccgagagac
ttgagtgtgttgtatatcacagaggagtctgcaaccatatcatggattcaaccgctcgca
ccctttgactactacaaaatggcttaccaatcaccaaaaggtagagtagacaatgtggtc
attgacagcgatgtcaccaactacaccctgaccaacctccatccggccaccgagtatgag
atcaagctaaatgcagtgaaaggaagccaagaaagcaaaatcatctccacgactgtcttt
acagctatggacatacctgcggagctgactgcattgaatgtcacacctcagggggctctg
ctgcgctggaaccctccggtctcaagtgttgataactatgtgctcaccctcacccggaac
caggttactgcagacaccttcctggtggagggtaacaagcaggagtatcagctgagtcag
ctcatccccagcaccccatactcagtggccctctatgccactaaaggccctctcactagt
ggcaccgtcatcgccaactttgtcacacctatggacgcacctcataaccttactgccagt
gagatcaaccatcgaagtgccctgatatcttggcaaccgcccatcgctgagatcgacaac
tacatgctgacatacaaagctgcagacggcggtcgaaaggagctgatctttgaatcagag
gatacatggattcgtcttgaggggctggcagagaccaccgaatataccgtgagactgcaa
gcctccagagggttagagaccagcgccattgtttccaccactttcacgacaggaaaccga
ttgtttcccacgccacagaactgtgcacagcacctgctgaacggagagaccctgagtggg
atctacagcatctacatcaacagagacctcagtcaaggtgtgcaggtttactgcgacatg
accaccgacggaggaggctggatagtgttccagcgacgtcagaacggcttgactgatttc
tccaggaagtggagtgactacaagattgggtttggcaacctggaggatgagttctggctc
ggcctggacaacatacagaggatcgcagctcaaggacgttacgagctccgcatcgacatg
aaagacgggcaggagactgtgtacgccaactacgacaggttttccatcggagactccaag
agcctctataaactgaggataggagaatacaatggcaccgcaggtgactctctgagctac
catcagagcagacctttctctacccaggataaggacaatgacattgctgtcaccaactgt
gctctgtcctacaagggagcctggtggtataaaaactgccatcgggctaaccttaatggc
aaatatggagagtccagacatagtcagggtataaactggtatcattggaaaggccacgag
ttttccatcccgttcgtggagatgaagatgaggccgttcaactaccgcagcatcagtggc
aagaggaggagatccactcattaa
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integrated database retrieval system
