Misgurnus anguillicaudatus (oriental weatherfish): 129442056
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Entry
129442056 CDS
T09481
Symbol
smarcd3a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129442056 (smarcd3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
manu03021
]
129442056 (smarcd3a)
03036 Chromosome and associated proteins [BR:
manu03036
]
129442056 (smarcd3a)
Transcription machinery [BR:
manu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129442056 (smarcd3a)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129442056 (smarcd3a)
PBAF complex
129442056 (smarcd3a)
GBAF(ncBAF) complex
129442056 (smarcd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
129442056
NCBI-ProteinID:
XP_055057841
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All DBs
Position
2:21500636..21570406
Genome browser
AA seq
503 aa
AA seq
DB search
MEDSAGGARKATKSKLFEFLVHGVRPGMTSGARMPHQGAPMGPPGPPYGGTPPIRPGMPN
PALDPNRKRPASTQPVQPPPVQNRPRKKPLGFPATNEISARQMDMREAQSDPPIGSNAKR
RKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLY
ISNTYNPAKPDAEDSEASIASWELRVEGKLLDDPGKQKRKFSSFFKSLVIELDKDLYGPD
NHLVEWHRTPTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTR
SCIIQALWQYVKTNKLQDPHEKEYINCDKYFQQIFDCPRLKFCEIPQRLTNLLLPPDPIV
INHIISVDSNDQKKTACYDIDVEVDDPLKSQMSGFLLSTANHQEIASLDNKIHETIESIN
QLKIQRDFMLSFSRDPKGYIQDWICSQNRDLKLMTDTAGNPEEERRAEFYNQPWSQEAVS
RYFYCKIQQRRQELEQVLAMRNT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggaggattctgctggaggagctcgtaaagccaccaagagtaaactgtttgagtttctc
gtccatggagtgcgtccagggatgacctcaggggcacgaatgccccatcaaggagctccc
atggggcctcccggacctccgtatggaggaacgccacctattcggccagggatgcctaac
ccagccctggaccccaaccgaaaacgccccgcctcaacccagcctgtgcaacctccccca
gtccagaatcgtcctagaaagaagccacttggatttccagcaacaaatgagatatctgcg
agacagatggacatgagagaagcccagtcagatcctccgattggatccaatgccaagaga
agaaaaatggcagacaagattctccctcaaaggattcgtgagttggtgcccgagtcccag
gcatacatggacctcctggcatttgaacgcaaacttgatcaaaccattatgaggaagagg
gtggacatacaagaagcccttaaaagaccaatgaagcaaaagcgcaagctcagattgtac
atttcaaacacatacaaccctgccaagcctgacgcagaggactcagaggccagcattgca
tcctgggagttgcgtgtagagggcaaactgttggatgatcccgggaaacaaaagaggaag
ttttcttctttcttcaagagcctggttattgagttggataaggatctgtacggccctgac
aatcatttagtggagtggcatcgcacccctacgactcaagagacagatggtttccaggtg
aagaggcccggtgatgtgaatgttcgctgtaccctgctcctcatgttagattatcagcct
ccccagtttaaattggacccacgccttgcacgtcttttgggcatccacactcaaacccgc
tcctgcatcattcaggcattatggcagtacgtcaaaaccaacaaactgcaggaccctcat
gagaaagagtacatcaactgtgacaaatacttccagcagatctttgactgtcctcgtctg
aagttctgtgagatcccacagcgactgaccaacctcctgctgccacctgatcccattgtg
atcaatcacattattagtgttgattcaaatgaccaaaaaaagacagcctgctacgacatt
gatgttgaagtcgatgatcctcttaagagtcaaatgagtggattcctgctgtccacagcc
aatcatcaagagattgcatctttagacaacaagatccatgaaacgattgagtccataaac
cagctgaagattcaaagagacttcatgctcagcttctccagggaccccaagggctacatc
caagactggatctgctcccaaaaccgggaccttaagctgatgacagatacagctggaaat
ccggaggaagaacggagagccgagttttataaccaaccctggtctcaagaagcagtcagt
cgctacttttattgcaagattcaacaacgaagacaagagcttgaacaagttttggcaatg
cgaaatacttaa
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