Misgurnus anguillicaudatus (oriental weatherfish): 129442429
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Entry
129442429 CDS
T09481
Symbol
rorab
Name
(RefSeq) nuclear receptor ROR-alpha B isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manu03000
]
129442429 (rorab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
manu03310
]
129442429 (rorab)
Transcription factors [BR:
manu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129442429 (rorab)
Nuclear receptors [BR:
manu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
129442429 (rorab)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
129442429
NCBI-ProteinID:
XP_055058467
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Position
21:complement(31339253..31390299)
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AA seq
526 aa
AA seq
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MESPPEPVTLSDKSASEAGASLEDSPVKPDSKAETDKPAAVKRQSCSSTNKDVSSAKKAH
TSQIESIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQGTVSYSCPRQKSCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLFAEVQKHRQQQQQDKVGKDTDDGREPQP
PGEAEPLTPTYAISANGVTELPDDLGGYANGQTPDGGKADSAIGGFYLDIQPSPDQSGLD
MDGIKLEPVCDLSSDSGLDQYCCYSNEDSSPSDSDLDHLSENICKSHLETCQYLREELKP
SNWQTVLQADLDAYQKKSQEDMWQLCAVKVTEAVQYVVEFAKRIDGFMELCQNDQIVLLK
AGSLEVVFVRMCRAYNSQNNTVFFDSKYAGPEVFKALGCDDLISSVFEFAKSLSSLQLTE
DEIGLFSAYVLMSADRCWVQEKTRVEKLQQKIKVALQNLLQMNQRDEGILTKLVCKVSTV
RMLCRRHMEKLSAFRALYPEMVHTRFPPLYKELFGSDFEQALPQEA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggagtccccgccagagcctgtcacgctgtcggacaagagcgcttctgaagcgggcgct
tcgttggaggacagcccggtgaaaccggacagcaaggctgaaaccgacaaaccagcagca
gttaagcggcagagttgctcaagtacaaacaaggatgtttcctcagcaaagaaagcacac
acatctcagattgagagtattccctgtaaaatctgtggagataaatcatcagggattcat
tacggagtcatcacctgtgagggatgcaagggtttcttcaggaggagtcagcagggcact
gtgtcatattcttgtcctcggcagaagagctgtctgatcgaccgcaccagcagaaaccgc
tgccaacactgtcgcctgcagaaatgcttagcagtggggatgtcgagagatgctgtgaag
tttggccgcatgtctaagaagcagagggacagtctgttcgcagaggttcagaaacaccgt
caacagcagcagcaagacaaagttggtaaagatacagacgacggacgggaaccacagcct
cctggagaggcggaaccgctcacgcccacttacgccatctcggccaatggggtcaccgag
ctccccgatgacctcggcggatacgcgaacggtcagaccccggacgggggtaaggccgat
tcagcgatcggtggattttacctggacattcagccctctccagaccaatcgggtctagac
atggatggcattaaactagaacctgtgtgtgacctcagctcagactctggcttagatcaa
tattgttgctatagcaatgaagactcttctccctctgacagtgatctggaccatctgtca
gagaacatctgcaagtctcacctggagacgtgccagtatctcagagaagagctaaagccc
agcaactggcagacagtcctacaggccgacctggacgcctaccagaaaaagtctcaggag
gacatgtggcagctgtgtgcggttaaagtcactgaggccgtgcagtatgtggtcgagttt
gccaagcgcattgatggattcatggagctctgtcagaacgatcagatcgtgctgctcaaa
gcaggttctttagaagttgtgtttgtgaggatgtgtcgggcgtacaactcccaaaacaac
acagtctttttcgacagcaaatacgcagggccagaggtcttcaaagctctgggctgtgat
gatcttatcagctcggtgtttgagtttgctaaaagcctgagctctctgcagctcaccgaa
gatgagatcggcctcttttcagcatacgtgctgatgtctgcagatcgctgctgggtgcag
gaaaagaccagagtggagaaactccagcagaagatcaaggtcgccctgcagaatttacta
cagatgaaccaaagggacgagggaattctcacaaagctggtctgtaaagtatccactgtc
cggatgctctgccgtcgtcacatggagaaactgagcgcgtttagagctctgtacccagaa
atggtgcacacgcgcttccctccgctctataaagagctgtttggttcggactttgaacag
gctctgcctcaggaggcctga
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