KEGG   Misgurnus anguillicaudatus (oriental weatherfish): 129442960
Entry
129442960         CDS       T09481                                 
Name
(RefSeq) integrin beta-1 isoform X1
  KO
K05719  integrin beta 1
Organism
manu  Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03271  Virion - Rotavirus
manu04145  Phagocytosis
manu04510  Focal adhesion
manu04512  ECM-receptor interaction
manu04514  Cell adhesion molecule (CAM) interaction
manu04517  IgSF CAM signaling
manu04518  Integrin signaling
manu04530  Tight junction
manu04810  Regulation of actin cytoskeleton
manu04820  Cytoskeleton in muscle cells
manu05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:manu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    129442960
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129442960
   04514 Cell adhesion molecule (CAM) interaction
    129442960
   04517 IgSF CAM signaling
    129442960
   04518 Integrin signaling
    129442960
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    129442960
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129442960
   04530 Tight junction
    129442960
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129442960
   04810 Regulation of actin cytoskeleton
    129442960
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    129442960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:manu04131]
    129442960
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:manu04147]
    129442960
   04515 Cell adhesion molecules [BR:manu04515]
    129442960
   04090 CD molecules [BR:manu04090]
    129442960
Membrane trafficking [BR:manu04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    129442960
Exosome [BR:manu04147]
 Exosomal proteins
  Proteins found in most exosomes
   129442960
Cell adhesion molecules [BR:manu04515]
 Integrins
  Integrin beta subunits
   129442960
CD molecules [BR:manu04090]
 Proteins
  129442960
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E
Other DBs
NCBI-GeneID: 129442960
NCBI-ProteinID: XP_073711743
LinkDB
Position
2:42569534..42603769
AA seq 799 aa
MDLRVLLVSVLLGLSRAQQDGNECTKASAQSCGECIQAGEKCGWCTDVNFLKQGEQKSTR
CDEVEALLKKGCTAANIENPRGSVETLRNQSVTNRKKEQGSLKSDQITQIQPQELRLNLR
SGEAQKFALKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTQLMSEMQKITSDFRIGF
GSFVEKTVMPYISTTPAKLLNPCTSDQNCTSPFSYKNVLSLTSEGSKFNDLVSRQQISGN
LDSPEGGFDAIMQVAVCANKIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKCHLE
NNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTKEFQPVYQELKNLIPKSAVGTLSSDS
NNVINLIIDAYNSLSSEINLENSRLPEGVSISYVSHCKNGISNTGEDGRKCSNISIGDEV
TFDVAITAKGCPNNGNPEEIKIKLLGFTEEVSIKLNFICECECHKDGRPNSQECHFGNGT
LECGACRCNEGRIGRVCECSKDEVRTEDLDANCRMDNGTDICNNNGDCVCGTCECKKRDN
PEERYSGKFCECDNFNCDRSNNKLCGGHGRCECRKCICDANYTGSACDCSMDTSTCLASN
KQICNGRGTCECGVCKCSDSKFQGPTCEICPTCPGVCPEHKDCVQCRAFKTGDKKDTCEK
DCAYFNLRMVQKKEDLPQPNDQPFINHCKERDANDCWFFFTYATRNDSTVEVHVAEELEC
PSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQENPIY
KSPINNFQNPSYGSKGVTL
NT seq 2400 nt   +upstreamnt  +downstreamnt
atggatctgagggtgctcctggtttcggttctgcttggactcagcagggctcaacaagat
ggtaacgaatgcacaaaggcttcggcacagtcctgcggagaatgcattcaggccggagag
aagtgtggatggtgtacagacgtgaactttctgaaacagggtgagcagaagtccacacgt
tgcgatgaggttgaggctttgctcaagaagggctgtacagcggccaacatagaaaatcca
cgtggaagtgttgagaccctcaggaaccaaagtgtaacaaatcgcaaaaaggagcaagga
tctctcaagtcagaccagatcacccagattcagccacaagaactcagacttaatctccgt
tcaggtgaagctcagaagtttgcgctgaaattcaagagagctgaggattatcctattgac
ctctactacctgatggacctcagttactctatgaaagatgatttagaaaacgtcaaaaac
ctgggaacccaactgatgtccgaaatgcaaaagatcacctctgacttcaggattggtttt
ggctcgtttgtggagaaaaccgttatgccgtacatcagcacaacaccagccaagctgcta
aacccttgcacatcagaccagaactgcacaagcccattcagctataaaaacgtactgagc
ctgacttctgagggatccaagtttaatgaccttgttagtagacagcagatctcaggaaat
ctggactcgccagagggaggctttgacgccatcatgcaagtggctgtctgcgcgaataag
atcggctggagaaacgtgacacgtctgcttgtgttttccaccgatgctggatttcacttc
gccggagacggaaaacttggcggaattgtgcttcccaatgatgggaaatgccatctggag
aataacatgtacactatgagccattattatgactatccatccattgctcatctcgttcaa
aaattaagtgaaaacaacattcagactatttttgcagtaactaaagaatttcagcctgtt
taccaggagctgaaaaatctcattccaaagtctgctgtaggaacattgtcttcagactcc
aacaatgtgataaatctcattattgatgcctataattctctgtcctctgagatcaatctg
gagaacagcaggctgcctgaaggtgtgtccatctcatatgtttctcactgcaaaaatgga
ataagcaacacaggagaggatggaagaaagtgctccaacatctcaatcggggatgaggta
acgtttgacgtagcgatcacggccaagggttgcccaaataatggtaatcctgaggaaata
aagatcaaactgctgggtttcacagaggaggtgtctatcaaacttaacttcatctgtgag
tgtgagtgtcacaaagatggccgtccaaacagccaggagtgtcattttggcaacggtact
ttggagtgtggagcatgcaggtgcaacgagggacgtattggcagggtttgtgaatgtagc
aaagacgaagtgagaacggaggatctggacgcaaactgtcgcatggataacgggacggac
atctgcaacaataatggcgactgcgtctgtggaacgtgcgagtgtaaaaagagggataat
ccggaggagagatacagtggaaagttttgtgaatgtgacaacttcaactgcgatcgctcc
aacaacaaactctgtggaggtcacggtcgatgcgagtgtcggaaatgtatctgcgatgct
aactacacaggcagtgcgtgcgactgctctatggacacctcaacctgtttggccagtaac
aaacaaatctgtaatggtcgaggcacttgtgaatgcggggtgtgtaaatgtagcgactcc
aagtttcagggcccgacctgtgaaatctgcccgacctgccctggagtttgtcctgaacac
aaggactgtgttcagtgccgagcgtttaagacgggtgacaagaaagatacatgcgagaag
gattgtgcatacttcaatctaaggatggtgcaaaagaaggaagatcttcctcagccgaac
gaccagcccttcatcaatcactgcaaagagcgagatgctaatgattgttggtttttcttc
acttacgctaccagaaatgacagcactgttgaggttcatgtggcagaggagcttgagtgc
ccctctggtcctgacatcatccccattgtagccggagtagtcgcgggtattgttttgatt
ggtttagctctgctgctcatctggaagctgctcatgattattcacgaccgcagagaattc
gccaaatttgagaaggaaaagatgaatgccaagtgggacacgcaagagaatcccatatac
aagagtcccattaataacttccagaatccaagttatggatctaaaggcgtcacactctga

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