Misgurnus anguillicaudatus (oriental weatherfish): 129443949
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Entry
129443949 CDS
T09481
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129443949 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129443949 (exosc1)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
129443949 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
129443949 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
PCB_OB
Motif
Other DBs
NCBI-GeneID:
129443949
NCBI-ProteinID:
XP_073716300
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All DBs
Position
3:5715371..5721980
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AA seq
194 aa
AA seq
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MSPMKLCVPGERLCSTEDCIPGTGTYLRHGYVFASLAGYVLRKNEGEELPVISVVRETEA
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRREDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHAKE
FRKVARVQPEYLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggtgaaaggctctgcagcacggaggactgtatc
cccggcaccggcacgtatctgcggcacggctacgtctttgcctctcttgcggggtacgta
ctgaggaagaacgaaggagaggagcttccggtgatttcagttgttagagagacagaagca
cagcttttgcctgacgtcggtgccattgtcacctgcaaggtaacaagtatcaacccaagg
tttgctaaggttcacatcttatatgtggggtcgacaccactgaaagatcgcttcagaggc
actatcagaagagaagatgtaagagcgacagagaaagataaggtggagacgtacaaaagc
ttcaggccaggagacatcgtccttgctaaagtcatctctttaggtgacgtgcagtcgaac
tacctgctaactacagctgagaatgaactgggcgtggtggtggcccacagtgaggctggt
gctcagatggttcccatcagctggtgcgagatgcaatgtccacgcacacacgctaaagag
tttcgcaaggtagcgcgggtacagccggagtacctgcaggcctga
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