KEGG   Misgurnus anguillicaudatus (oriental weatherfish): 129444140
Entry
129444140         CDS       T09481                                 
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
manu  Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:manu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    129444140 (taf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:manu03021]
    129444140 (taf5)
   03036 Chromosome and associated proteins [BR:manu03036]
    129444140 (taf5)
Transcription machinery [BR:manu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     129444140 (taf5)
   Coactivators
    SAGA/TFTC/STAGA complex
     129444140 (taf5)
Chromosome and associated proteins [BR:manu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     129444140 (taf5)
    STAGA complex
     129444140 (taf5)
    TFTC complex
     129444140 (taf5)
    SAGA complex
     129444140 (taf5)
    SLIK complex
     129444140 (taf5)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz TFIID_NTD2 WD40_WDHD1_1st WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st WDR55 NBCH_WD40 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_WDR19_1st WD_LRWD1 Beta-prop_Nup120_160 Tricorn_2nd Beta-prop_IP5PC_F LisH_PAC1 LisH_TPL VPS8_N RAB3GAP2_N Beta-prop_ACSF4
Other DBs
NCBI-GeneID: 129444140
NCBI-ProteinID: XP_055060531
LinkDB
Position
3:complement(9902230..9908560)
AA seq 745 aa
MAAVQDGTIELDTEKETKPEILSDGSVKLAGNTGSGALSSLPPAGGGAPKMEDQQTLIAV
LQFLKRNKLTESVDILRREAGLSDDQEDSQGTDAGGGGLGAGGKGDGDGVDAKSLLNRVS
IASAAAPQSAPLPAKSGEDQPDVSVVLSAYTQQGDPSLYKVYYSDLKKFIESVLDCHRAE
LSQLFYPLFVHMYLELVYNNHETEAKAFFEKFSGDQECYYEDDLRVLCGLTKKEHMKGNE
ALLDFRTSRFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKGQIDSM
SGSLGGEAKREVNKVKVYYGLLKEPEIEVPLDDEDDEAENEEGKPKKKKAKKDSMGSKSK
KQDPNAPQQNRIPLPELKDSDKLDKIMYMKESTKRIRLSPDNLPSVCFYTFLNAYQGLTA
VDFTDDSSLLAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDEKTASE
SKILHGHSGPVYGVSFSSDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP
FGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNANYVATGSTDRTVRLWD
VLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGATDGRVLLWDIGHGLMVGELKGHTDTIY
ALRFSRDGEILASGSMDNTVRLWDAIKAFDDIEMDDFTAATGHIHLPDNSQELLLGTYHS
KSTPVAHLHFTRRNLLLAAGAYNSQ
NT seq 2238 nt   +upstreamnt  +downstreamnt
atggcggctgtgcaagacggaacgatcgagttggacaccgagaaagaaacaaagcctgaa
attctcagcgatggatcagtaaagctcgcgggaaacacagggagcggggcactctcctcg
ttgccccccgccggtggcggagctccgaagatggaggaccagcaaactttgatcgcggtg
ctgcagttcctgaagcggaataaactcacggagtcggtggatattttgcgacgtgaagct
ggtctgtcggacgaccaggaggactcgcagggtaccgatgctggtggtggagggcttggg
gctggagggaagggtgatggcgacggagtggatgcaaagtctctgctcaaccgtgtgtcc
atcgcatcagcagccgccccccagagcgcccctctacctgcaaaaagtggggaagaccag
ccagatgtgagtgttgtgttgtcagcatacacccagcagggggacccatccctgtataag
gtttactacagtgacctgaagaagttcattgagtcggtcctggactgtcacagggccgag
ctgtcccagctcttctaccctctgtttgttcacatgtacctggagctggtctacaacaac
cacgagactgaagcaaaggctttctttgaaaagtttagtggtgatcaggaatgctactat
gaggatgacctgcgcgttctctgtggccttacgaagaaggagcacatgaaggggaacgag
gctttgttggacttccgcaccagccgcttcgtgctccggatctcccgggactcctatcag
ctgctaaagagacacctgcaggagaggcaaaataaccagatatggaacatcattcaggag
cacctgtacatcgacatttttgacggcatgccacgaagcaagggtcagatcgacagcatg
tctggcagtctagggggggaggccaagcgagaggttaacaaagtaaaggtatattatggg
ctgctaaaggagccagagattgaggtcccacttgacgatgaagatgatgaagcagagaac
gaggaagggaagcccaagaagaagaaagctaagaaggacagtatgggctccaagagcaaa
aaacaagaccccaatgcccctcagcaaaacaggatccctctgccagagctaaaggactca
gacaagctggataagatcatgtatatgaaagaaagcaccaaacgaatccgactcagccca
gacaaccttccttctgtttgcttttacacattcctcaatgcctaccagggtttgacggca
gtagacttcacagatgactctagtcttctagcgggagggtttgcagactcgaccgtccgc
gtatggagcgtcacacccaaaaaattacgcaaggtcaaatctgctgcagacctgaatctg
attgataaggagtcagatgatgttcttgagaggatcatggatgagaagacagccagcgag
tcgaagatcctccacggtcacagtgggccagtgtacggtgtcagcttcagctcagacagg
aactatttgttatccagctctgaggatggtacagtcaggctgtggagtctgcagacgttt
acttgtcttgtgggttacaaaggacataattatccagtgtgggacactcagttttcaccc
tttggttattattttgtatctggaggacatgacagagtggcacgcctttgggcgacagat
cattaccagccgctgcggatatttgctggccatctagctgacgtcacctgcacacgcttt
catccgaacgctaactatgtggccacgggctccaccgaccgtaccgtgcgcctctgggat
gtactgaatggaaactgcgtccgaattttcacaggtcacaagggccccatccattcttta
gcattctcacccaatggaaagttcctggcatctggtgcaacggacgggagagttctgttg
tgggatatcggacacgggctgatggtcggagagctgaagggacatacagacacgatttat
gccctcaggttcagcagagacggtgaaattcttgcatcaggctctatggataacactgta
agattatgggatgctataaaggcttttgatgatatagagatggatgatttcactgcagcg
actggacacattcacctgcccgataactcccaagagctcttgctagggacgtaccactcg
aaatccacacccgttgcccacctgcacttcaccagacgtaacctgctcctggctgcaggg
gcgtataactcccagtga

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