Misgurnus anguillicaudatus (oriental weatherfish): 129444440
Help
Entry
129444440 CDS
T09481
Symbol
lsm6
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03018
RNA degradation
manu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129444440 (lsm6)
09123 Folding, sorting and degradation
03018 RNA degradation
129444440 (lsm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129444440 (lsm6)
03041 Spliceosome [BR:
manu03041
]
129444440 (lsm6)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129444440 (lsm6)
mRNA degradation factors
5'-3' decay
Lsm complex
129444440 (lsm6)
Spliceosome [BR:
manu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129444440 (lsm6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
129444440
NCBI-ProteinID:
XP_055061088
LinkDB
All DBs
Position
3:complement(21502961..21505444)
Genome browser
AA seq
80 aa
AA seq
DB search
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAVEQTEEYVNGQLKNKY
GDAFLRGNNVLYISTQKRKM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccggaagcagacaccaagtgatttcttgaagcagatcattggaagaccagtc
gtggtgaaattgaactctggcgtggattacagaggagttctcgcctgccttgatggctac
atgaacattgctgtggaacagacagaggagtatgtcaatggtcaactgaagaacaaatat
ggagatgcatttctcagagggaacaatgtgttgtacatcagtacccagaagagaaagatg
tga
DBGET
integrated database retrieval system
