Misgurnus anguillicaudatus (oriental weatherfish): 129444539
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Entry
129444539 CDS
T09481
Symbol
zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129444539 (zc3h13)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
129444539 (zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
129444539
NCBI-ProteinID:
XP_055061243
LinkDB
All DBs
Position
3:27140142..27419001
Genome browser
AA seq
1708 aa
AA seq
DB search
MSKIRRKVTVENSKTISDSSSSNSTTTPSRRPSVFERLGPSTASNAAETHCRNWLKTGNC
SYGSTCRYTHGTPSQEKGFSGKFNRSAERPTGDLRERMKNKKQDVDGDTQKRDTDKPTSP
TTRQQDSSKIRQREKEDIKITKEHTPASEEETVDWEASREDSDNGDYDYELSLEMKRQKI
QRELMKLEQENMDKREDVIIKKEEQVSKTRNSNSLKDKASPKPSSSKGSPLSRKSSCSPK
HKATGKSGTSSKKEKSSTFSVISCPVSDQPRAEKTDGRSSKSGHSRKKGPRTPSPPPPVH
VGPPVAGKKHKNKHKNKEKADDKLKEGKERGCDLEKHKEKKEKRRCRTPPRHRCSPSPHS
RQQHSPSSHSGSSALRQSPSPRRRQGSVSPPYQQDFPPPSSFSPPPIQSSRHSHSPLTPH
REASPSPTPRRSSPSSRHRSQARERGRGERDRSPVFPERRHERKDESRMNREKDGCRDER
DYEIERISVRDGCDAKDSRDRRGERDRRDARDERHHRGEVKDSRDTYATETRDRSGQESL
EQRERDRERERERKEIHRKEETSQEDRSYGRGHGKEEVKIDTRVEIRNESRAERTGRGRG
RGSDSQDQKGSARGNRASQSDTSGTHGHESWEPRSSFRDRSSEKNSDRYDNDRLRGEQVR
DDRRVGHAERDCRDNREREQRASPRHQQNRGEDLEERRDDRRNDRGEERREERIREREKE
REREKEREREKEREREKEREREKEREREKEREREKEREREKEREREKERERDVERESERV
RERERERERERERERDERGRERERDERVRDERVRERERERKERDREQRERQREWEEREKK
REERRERRDELRDDRSGRDAQEEKKTIRKRHRVENTPSPLLSPKRGRDVSPADSEGYNSI
EEKGDKRRLLSQVVRPQEPPRSPVCLFTDDKNTRWKDEDHRGDKQDGSLHEVVDSQSERG
PGRGAERREEHSLDVSANNSICDSRRGKEQRDLPSASLIPSASIEEKGPVSAVHEEGKKK
PKSQKKYVKKNRKEEEGAAGGGEHGNLRSIVPETRQPLLSHCKTPKRKAIDRKRKCSGAA
QSDVSEDELVTQNPVSKRQRGSCTPPSINKDDLLSQRPLTVGRSSLATKIDANFSDWSDD
DVPERAESSSASQPSGRPPVRILSSECPPRRGACGGGGRDRIDPPIAPLLSDAPILMQSL
PLQPLLPKHLLRKSQQADLQQHISGMSSSRASSRRLSPPSNESAHCDEGQQGMRSRRGPT
QGTNLRDRDQRERDREREKDRERAVASDHTGGERKSRIDQLRRGEPSRSTSSDRQDSRSL
SSRRSSPESERQARSRAGSYDSRERDRDRDQLEREREKNRQLQNQTQQRDWEPESREWGG
RSRDPFLRGSRELIRERDMRERERLLPDGLLSHDRMDRDRAERDRERERILPYNLQTHRE
PKSRAEMKVDRGEYESREALINLENPSDSSNLQEAASEKMDSLDEEEDEKGDTVSGGEEY
EPISDDELDEILADSQKRDEQQDDEKNSGHVDVIDVDWSSLIPRQKQELRAPGAALLKFT
PGAVLLKAGVSRNLAGPQLLAKVTEVCCKELEDPKDADKVLEHDLGALNMAAHNRRMERA
SLLRSFGYRCKALCARQDIAIRRQLLKNDRGTTKQIYTCAPVVESELLQLSVQLLKKKMS
SNQTSGQKSSDSGSTSQQLSTPAEVCVS
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcaggcggaaagttacagtggagaactcaaagaccatatcagacagcagc
agtagtaacagcacgaccaccccctcccgtaggcctagtgtgtttgagagactcggcccc
agcacagccagtaatgctgcagagacccattgtagaaactggttaaagactggaaactgc
agttatggcagcacatgtcggtacacacatggaactccatcacaagaaaaaggcttctct
ggaaaatttaacaggtcagcagaaaggcccactggggatcttcgggagaggatgaagaat
aagaaacaggatgtagatggtgacactcaaaaaagagacacagacaagcccacttcccct
acaaccagacagcaagattcatccaaaatcagacagagagagaaagaagatatcaaaatc
acaaaggagcacacaccagctagtgaggaggagacggtggattgggaagccagtcgtgaa
gattctgataacggtgattacgattacgagttatcccttgagatgaagagacagaagatt
caacgtgagctgatgaagctggagcaggagaatatggacaaacgagaggatgtcatcatt
aagaaagaggaacaagtttccaaaactagaaacagcaattctttgaaggacaaggcctct
cctaagccctcaagttctaaggggtcacctttgtcccgtaagtccagctgctctcccaaa
cataaagctacagggaagagtgggacctcaagcaagaaagagaagtcctcaactttctca
gtcatttcttgtccagtgtctgaccagcccagggcagaaaagacagacggcagatcttca
aaaagtggccatagcagaaagaaagggccacggactccaagtcctcctccacctgtccat
gtgggaccaccagtggctggaaagaaacacaaaaataaacacaaaaacaaggagaaagca
gatgacaagcttaaagagggaaaagagagaggatgtgatctggaaaaacacaaggagaaa
aaagaaaagcgcaggtgtagaaccccaccgcgtcaccggtgcagcccctcccctcattcc
agacaacaacactccccctcctcacactctgggtcctcagcactgagacaatccccctcc
cctcgccgcagacagggttctgtctcccccccttaccaacaagactttccccctccctct
tcattctcaccccctcctatccagtcttcacgccactcccattctccactcacccctcat
agagaggcctccccaagccccacccctcgcaggtctagccccagctcccgtcaccgctca
caggccagagagaggggtagaggagagagagacaggagtcctgtgttcccggaaagacgc
catgagcgcaaagatgagagccgtatgaatcgtgagaaggatggctgccgtgatgaacga
gactacgagattgaacgcatttctgtacgtgatggctgtgatgccaaagacagtcgagac
cgccgtggtgaacgagatagacgtgatgcccgggatgagcgacatcatcgtggagaggtt
aaggattctagggatacttatgcaacagaaacgcgagaccgctctggacaagaatccctg
gaacagagagagagagaccgtgaaagggaaagggaaagaaaagaaattcatagaaaagag
gaaacttcccaggaggacaggagttatggaagaggacatggaaaggaagaagtaaaaatt
gataccagagtggagatcaggaatgaatctcgagctgaaagaacaggaagagggagggga
cgtggatcagattcccaggatcagaaagggtctgctcgtggtaacagagcatcacaaagt
gacaccagtggtactcatggacatgaaagctgggagccccggagcagtttcagagatagg
agttctgaaaagaacagtgatcgatatgacaacgataggttgcgaggagaacaggtcaga
gatgaccggagggtagggcatgcggagagagattgccgtgacaacagagaaagagaacaa
agagcgtctcctcgccatcaacagaaccgtggtgaagaccttgaagagaggagagatgac
cgaaggaacgatcgaggggaggaaagaagagaagaacgtatccgtgaaagagagaaggag
agagaaagagagaaggagagagaaagagagaaggagagagaaagagagaaggagagagaa
agagagaaggagagagagagggaaaaagagagagagagggaaaaagagagagagagggaa
aaagagagagagagggaaaaagagagagaaagagatgttgaaagagaaagtgagcgagtc
agggaaagggaacgcgaaagagagagagaaagagaacgggaaagggatgaacgggggcgg
gaaagggagagagatgagcgggtgagagatgagcgagtgagagaaagggaacgagagagg
aaggaaagggatagggagcagagggagaggcagagggaatgggaagaaagggagaagaaa
agggaggagaggcgagagagaagggatgagttgcgagatgatcgctctggccgagatgct
caggaagagaagaagaccatccgtaagagacatcgtgtagagaacacgcccagtccactg
ctatctcctaaaagaggacgagatgtgagccctgcagacagtgaaggttacaacagcatt
gaagaaaaaggagataagcgccgcctgctaagtcaagtggttcgtccccaggaacccccc
cgctcaccggtctgcttgtttactgatgataagaacactcgctggaaggatgaagaccac
cgtggtgataaacaagatggcagcctacacgaggtggtggattcccaaagtgagagagga
cccggaagaggagcagagcgtcgtgaggaacattctctagatgtttctgctaacaatagt
atctgtgactccagaaggggaaaagagcagagagacctcccctctgcttccttgattcca
tctgcctctatagaggagaaaggccctgtgtctgctgttcatgaggaaggcaagaaaaag
cctaaatctcagaagaaatatgtgaagaagaaccgtaaagaggaggagggagcagctgga
ggaggggaacatggtaacttacgttccattgtacctgaaacgcgccagcctcttctttcc
cactgcaagacacccaaaagaaaagccatagataggaagcgtaaatgctctggtgctgca
cagtcagatgtttctgaggatgagctggtaacccaaaaccctgtcagtaagagacaacgt
ggatcatgtacacccccatcaataaacaaggatgaccttctgtcccaaaggcctttaact
gttggaaggagttctcttgcaacaaaaattgatgctaacttcagtgactggtctgatgat
gatgtaccagagcgagccgagtcatcctctgcgtcccaaccatctgggaggcctccagtg
agaatactttcatctgagtgtccccccagaagaggtgcgtgtggtggtggtggcagagac
cgtattgatccccccatcgcccccctgctctctgatgctccaatattaatgcagtcactt
cctttacaaccgttgctgccgaaacacctgctgcgcaaatcgcagcaggcagacttgcag
cagcacatcagtggtatgtcatcaagtcgagcatcatcaagaagactgtccccaccttcc
aatgagtcagctcactgtgatgagggccaacagggtatgagatctcgtagaggacccacc
cagggcaccaacttgcgtgatcgtgatcagcgagaacgcgacagagaaagagaaaaagac
agggagagggcagttgctagtgatcacacaggaggagagagaaaatcaagaattgatcag
ctgcggagaggagaacccagtcggagtacctcctcagaccgacaggattctcgtagtctt
agttcccgtcgcagttcaccagagtctgaacgtcaagctcgctctagagctggatcttat
gacagccgagaacgtgatcgagatcgtgatcagttggaacgagagcgtgagaaaaatcgt
caattgcaaaatcaaacccaacaacgagactgggaaccagaatctcgtgagtggggtggc
cggtccagagaccccttccttcgtggaagccgggagctaattagagagcgagacatgcga
gaacgggagcgactattaccagatgggctgctgtcacatgacagaatggatcgtgaccga
gctgaaagagacagagaacgggaaaggattctcccatataatcttcaaactcacagggaa
ccaaagagcagagctgagatgaaggtggataggggagaatatgagtcaagagaagccctt
ataaatctagaaaaccctagtgatagctcaaatttgcaagaagcagcatctgagaaaatg
gatagccttgatgaagaagaggatgaaaagggagacactgtgtcaggtggtgaggagtac
gagccaatcagtgatgatgaacttgatgagattctggcagacagtcaaaagcgggatgaa
cagcaagatgatgaaaaaaattccgggcatgtggatgtgattgatgtagactggtcaagt
ttaataccccggcaaaaacaagagttaagagctcctggggcagcactgctcaaattcact
ccgggggctgtgctcctcaaagcaggagtctccagaaacttggctgggcctcaactcctt
gccaaggttacagaggtgtgctgcaaagagctggaagatcctaaagatgctgataaagtg
ttagagcatgatctgggagctctgaacatggctgcacacaacagaagaatggaaagggcc
agtctgctgaggagttttggctatcgttgtaaggcactgtgtgcgcgccaggacattgcc
atacgcagacaattgctaaaaaatgacaggggcacaaccaaacaaatctacacatgtgct
ccagttgttgaaagtgagctactgcaactcagtgtgcaacttcttaaaaagaaaatgtct
tccaaccaaactagtggtcagaagtcgtctgattcaggctctacatctcaacagctcagc
acaccggcagaggtgtgcgtttcctga
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integrated database retrieval system
