Misgurnus anguillicaudatus (oriental weatherfish): 129444727
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Entry
129444727 CDS
T09481
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
manu03036
]
129444727 (chd9)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129444727 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
OSK
Motif
Other DBs
NCBI-GeneID:
129444727
NCBI-ProteinID:
XP_055061528
LinkDB
All DBs
Position
1:35016623..35094969
Genome browser
AA seq
2939 aa
AA seq
DB search
MTDPIMEFFDDPSIFGGGLDSLVHDDTGFNPGTVSLEDELHLGPSFERLQEEAGSSSSIQ
HGLSYNHPVGHFDTMKSQTSIAQTFTGPEGGNSNARAFLPQQQPFQGHNINQVPQTNGLF
LNNSPMWGNHDQKGGNYHQHHQQQLQQQHKQFQQQQFQGQHQQYSQQHLQQRQHGLGQHP
MSNQQQIPHQQISHQGLHHLGKTYQEHSGFYYQANVSQIHSQQAHHNSLIREGGSFHPAV
TPSSHSQSKTYLESSMMPVSSQQHGGFQGVQGFTASPRLEDNDLGFPVQSSPATHSFSSG
SVSHATSYPSTHYSLPSQPSPVVNATQSYSSMSNSSTVIPSATNLLDNGCSFLSSGMEHE
QQQVQIPGSPAQQCLYRGMQSSKSGQNLFISSEVFPEALSSFSDDHSFPLVERKNCNVAG
PSITSQSGSNSNGFRALEEALLGEQHDGRLEDLGEASDLLGDELLPQLEALDQEESSNHS
WVNAGLENVGQDDDGDKVKEIEDGIDVPIGHSTQPPKNTNGPSSQVRVLSPPVKSSSSSS
SSSSSYASVSEKRVKKRQQQMESPLSDDKQLKANRIISEAIAKARERGEKNIPRVMSPES
FPSSSSQHHSHKAGGSKSKGKNKSSKSARIVASSKPKQKSQIGKIVIKFGKKKRKKAESS
EELSDDDRPPRRSSKDNDSKRRSNRKVKRKKYEEDGEARLSEEEMKVIVKAKKSSNAHKE
PKVQLFVENPSEEDAAVVDKIMASRLVKKEVSPGVIVECEEYYVKYKNYSYLHCEWATEQ
HLEKDKRIQQKIKRFKIKQAQKAHFFADIEEEPFNPDYVEVDRVLEVSYCQDKDSGEPVV
YYLVKWCSLPYEDSTWELNEDVDQSKIEEFKQLQAAKPHTDRKERPPASHWKKREQSRQY
CNGNCLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIYRTGIKGPFLII
APLSTITNWEREFRTWTNLNVIVYHGSVVSRQMLQQYEMYFRDSQGRVIRGAYRFQAVIT
TFEMILGGCPELNAIDWRCVIIDEAHRLKNKNCKLLEGFKLMSLEHKVLLTGTPLQNTVE
ELFSLLHFLEPTRFPSENTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKE
ETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANVPNLLNTMMELRKCCNHPYLIKGAE
EKIMEDFREVYSPAAVDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDIL
EDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCI
IFDSDWNPQNDLQAQARCHRIGQDKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSM
SGRDNSVGGGGQVQQQLSKKEIEDLLRRGAYGAIMDEEDEGAKFCEEDIDQILQRRTKTI
TIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKAEIDMETVNGRNSLVIDTPRV
RKQTRPFSATKDELAELSEGESSGDDKPKLRRPHDRLNSYGRTECFRVEKNLLVYGWGRW
KDILAHGRFKRQLTERDVECICRALLAYCLVHYRGDDKIKGFMWDLIAPTEDGRTKELQN
HLGLSTPVPRGRKGKKMKTQSSSFDIQKAEWIRKHNPEHMLSDDGYKKHLKHHCNKVLLR
VRMLYYLKQEVIGAQCQKVLDGADASEVDIWVPEPDHSEMPALWWDMLADKCLLLGVYKH
GYEKYNTIRADPALCFLERVGRPDEKAIAAEQRGNDFMDGDVDDPEYKPAPALLKDDMED
DASSPGELVITDAVGEGGSVLDGGGGNLSASTGIYWPSPSTLTARLRRLITASQRFTKSR
QILQIHQTQTQTTTPAIYTLPPMLNDALNPKMVAKIERQQRWTRREEADFYRVVSTFGVV
YDPDLGRFDWTKFRAMARLHKKTDESLQKYLCAFIAMCRRVCHLPPREGDMVDTSLAIQP
ITEERASRTLYRVELLRKIREQVLRHPQLYERLALCQSGPDLPVWWEAGSHDRDLLLGAA
KHGVSRTDYHILRDPELCFIAAQRNYSQNKGSAPPVQAQNQAMSLGQSHVPSPLQHVLAK
DATASPLSYPREDSSELKEEPLSDGEIKMETSSVRPPTPSGVEVKDGDHKEVESERRMVA
ARTKPLTPNSVVRKQKKLSKRSRREARRASGSDSDSDGSSSSSSSSSSSRSSSSSSSTSR
SGSSSSSSSSSCSSGSSSSSSSSSSSSDNSDSEEVPKNVSAVSGVKGFDEDSVASVSATQ
DDMQDSHVTNGISNPPHPFQGGYMLAASYWPKDRVMINRLDSICQAVLKGKWPGVRRAYE
GNAVTSFYTTKLLDNAGTLVEDPSASPQGSKVKKHDADREKEFSVKINNEGSLKLTFQKQ
GLPLKRPLEGEEGPLAQQQYLARLQELQNASDTSLVDYTKTQNNYPQGMSGHLRLNGMMD
GQPAIKKKRGRRKNVEGMDLLFMNKNRPPMMAEQVPAGWSGGVAGTSATAGSSTPQGPGS
LDTESRVPVISLKDGTRLAGEDAPKRIELDQWLKEHPGFVADVGAFIPSTNKLQFQDGRP
KQKRHRCRNPNKIDINSLTGEERVQIINRRNARKIGGAFAPPLKDLCRFLQENPEYGVPP
EWADVVKQSGYLPESMFDRILTGPIVPEEVSRRGRRPKNALAKPATAASASANAALGLNP
VLTNGLLGGLDLPSLQALQHNLQSLQSLQLMGLSHDPTNMAAMFPMMLSGMPGLPNLLGM
SGLLGGKASEEAAGVALPGDEDGRKKSSVDSTAPKGSAQTSSPDRKAERTEGQSSKATTS
TATNSNQTSASASGHQLAFNPLLLSSMLYPGMLLSPGLNLPVANQPQAANTQPTPQPAAS
EATPLQPGCSEEKDSDEGEEPDDKKDISGPEGSAKAESSSSESDSSSESSEDSDSSDED
NT seq
8820 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcccatcatggagttttttgatgaccctagtatatttgggggaggccttgac
agcctagtccatgatgatacaggatttaaccctgggactgtgtctttggaagatgagctt
caccttggccctagctttgagcgtcttcaagaggaagcagggtcaagttcaagtatccaa
catgggttatcctacaatcatcctgttgggcattttgacactatgaagtcacagacttca
atagcacaaacctttactggtccagaaggaggtaacagtaatgcaagagcatttctgcca
cagcaacaaccatttcaagggcataacattaaccaagtaccccagacgaatggactgttt
cttaacaatagccccatgtggggaaaccatgatcagaaagggggtaactatcatcagcac
catcaacaacaacttcaacaacagcataaacaatttcaacagcaacaatttcagggtcaa
catcaacaatacagtcagcagcatcttcaacagagacagcatggtctcggtcaacaccca
atgtcaaaccagcagcaaattccccaccaacaaatatctcatcagggtttgcaccatctt
ggtaagacgtatcaggaacattctggattttattatcaggccaacgtctctcaaattcat
tcccaacaggcccaccataactcgcttatcagagagggtggttcattccaccctgcagtc
actccgagtagtcattcgcagtccaaaacatatctagagtcctcgatgatgcctgtgtcc
tctcagcagcatggtgggtttcaaggcgtccaaggttttactgcaagtccaaggttagag
gacaatgatttgggcttccctgtgcaatcttcccctgcaacccattctttctcttctggg
tcagtaagccatgccacatcgtatcccagcacccattactctcttcccagccagccttct
cctgtagtaaatgcaactcagtcatactcatctatgtcaaactcttcaacagttatacca
tcagctacaaacctgttggataatggttgctcttttctctcttctggaatggaacatgag
caacagcaagtccaaatacctggcagtccggcacaacaatgcctttatcgtggcatgcag
agctctaaatcagggcagaatcttttcatctcttctgaggtatttccagaagctctgagc
tcgttctctgatgaccattcattccctttggtggaaaggaagaattgcaatgtggcagga
ccttcaattacaagccagagtggaagcaatagtaatgggtttcgggctctggaggaggct
ttacttggagagcaacacgatgggaggcttgaggacttaggagaggcctctgaccttttg
ggagatgagttgttaccccagctggaggcactagatcaggaagagagctccaaccactca
tgggtaaatgcaggactggaaaatgtaggacaagatgatgacggagataaagtgaaggag
atagaggatgggatcgatgtgccaattggtcacagcacacagcctcctaagaacactaat
ggtcccagcagtcaggtgcgggtactcagcccaccagtgaagagtagctcttcttcctcc
tcttcgtcatcctcgtacgcatccgtgtccgagaaacgggtaaagaagcgtcagcagcag
atggagtcgcccctttcggatgataaacaactaaaggccaatcgaataatctcagaggcc
atcgctaaagcacgggagagaggagagaaaaatatcccacgcgtcatgagtcccgaaagc
ttcccgtcttcatcgtcgcagcaccacagtcacaaggcgggtggctccaagtccaaaggc
aagaataagagttccaagagtgcccggattgtggcgtcctccaagcccaaacagaagagt
caaattgggaaaatcgtaataaaatttgggaagaagaaacgaaagaaggcagaatcctca
gaagagctgtctgatgatgacagaccacctcgacgatcctctaaagacaatgattcaaag
cgacgttctaacaggaaggtcaagaggaagaagtatgaggaagacggggaggctcgactg
tctgaagaagaaatgaaggtcatcgtcaaagccaagaagagctccaatgctcacaaagag
cctaaagtgcaactctttgtggagaacccaagtgaggaagatgcagctgtggttgataaa
atcatggcatctcgcttggtgaaaaaagaggtttctcctggagtgattgtggaatgtgag
gagtactatgtcaagtacaaaaactactcatatcttcattgtgagtgggcgacggagcaa
catttagagaaagacaagaggatccagcagaaaatcaagcgcttcaagatcaaacaggca
caaaaggcacacttctttgctgatattgaggaggaaccgtttaatccggactatgtagaa
gtcgaccgagttctggaggtctcgtactgtcaggacaaggatagcggagagccggtggtg
tattatctggtgaagtggtgctcgctgccgtatgaagacagcacatgggagctgaatgaa
gatgtggaccagagtaagatcgaggagtttaagcagctgcaggcagcaaaaccacacacg
gatagaaaagaacgtcctccggcgagtcactggaagaagcgggagcaatcgcgtcagtat
tgtaatggaaactgtctcagggattaccagctggagggggtcaactggcttctcttcaac
tggtacaacaggcgtaactgtattctggctgatgaaatgggtctgggtaagaccatccag
tccatcacatttctagaggagatctatcgcacagggatcaaggggccatttttaatcatc
gccccgctctccaccatcactaattgggagagagagttcagaacctggacgaacctcaat
gtcattgtctaccatggcagtgtggtcagcagacagatgctccagcagtatgagatgtac
ttcagagactctcaggggcgtgtgataagaggtgcttaccggttccaggcggtcattacc
acatttgagatgattttgggaggctgtccagaactcaacgcaatcgattggcggtgtgtc
atcattgacgaagcccatcggctcaaaaacaagaactgcaagctactggagggtttcaaa
ctcatgagcctggaacataaggtattattgacgggcacccccctacagaacacggtggag
gaactctttagtctgctgcacttcctggagccaacccgttttccctctgaaaacaccttc
atgcaggaatttggagacctcaagactgaggagcaggtccagaaactccaggccatcctg
aagccaatgatgctgcgtcgtcttaaggaggatgtggagaagaagctggccccgaaagag
gagactattatagaagtggagctcaccaacatccagaagaaatattaccgcgcaatactg
gagaagaacttctcattcctggctaaaggcgccggccaagccaacgtccccaatttgctc
aacaccatgatggaactacgaaaatgctgcaaccatccctacctcatcaaaggggctgaa
gaaaaaatcatggaagacttcagggaagtttacagccccgcagcggtagatttccacctg
caggctatgattcagtcggcaggtaaactcgttcttattgacaagctgctgcccaagatg
aaggcaggtggacacaaagttctcatcttctcccagatggtgcgctgccttgacatcctg
gaagactacctcatccagagaagatacctctatgagcggatagacgggcgggtacgtgga
aaccttcgtcaagcagcaatagaccgcttcagtaaacccgactctgatcgattcgtcttc
ctgctgtgcacacgagcaggtgggcttggaataaacctcacagctgccgacacctgtatc
atctttgactcagactggaacccacagaacgacctgcaggctcaggctcgctgccaccga
attggtcaggataaagctgtaaaggtgtatcgactaatcacacgtaactcatacgagcgt
gagatgttcgatagagccagtctcaagctgggattggataaagccgtgctacagagcatg
agtgggcgggacaacagtgtaggaggaggagggcaggtacaacagcagctctccaaaaaa
gagattgaggaccttttgaggcgtggagcttacggtgccatcatggatgaagaagatgaa
ggagctaaattttgtgaagaggacattgaccaaatcctgcaacgcagaaccaagaccatc
actattgaatctgagggccggggctccacctttgccaaggccagttttgtagcttcaggg
aacagaacagacatctctctggatgaccccaacttctgggacaagtgggcaaagaaagca
gagatcgacatggagacggtcaatggcagaaacagtctggtgatcgacacccctcgagtc
aggaaacagacccggccgttcagcgccactaaggatgagctggccgagctgtctgaaggg
gagagcagtggagacgacaagcccaaactgcggaggccacatgaccgccttaacagctat
gggcgcaccgagtgcttcagggtggagaaaaatctgctggtgtatgggtggggccgttgg
aaggatattttggcccacggacgctttaaacgacagctgaccgagcgtgatgtggagtgt
atatgcagagcgctcttagcatactgcctcgttcattaccgtggagacgacaaaatcaag
ggcttcatgtgggatctgattgctcccacggaggacggcaggaccaaggaacttcagaac
catttaggtttgtcgacaccagtaccgcgtggcaggaaaggaaagaagatgaagactcag
tccagctcgtttgatattcagaaggcggagtggatccgaaaacacaacccagagcacatg
ctgtctgatgacggctacaagaaacatttgaaacatcactgcaacaaggtgctgttgagg
gtcagaatgctgtactatctcaaacaggaggtgataggagcacagtgccaaaaagtgctg
gatggagcagatgccagcgaggtggatatctgggttcctgagccggatcattcagagatg
cctgctctgtggtgggacatgctcgcggacaaatgtctgctgttaggagtctataagcac
ggttatgagaagtacaacaccattcgcgcggatccagcactgtgtttcttggaaagggtc
gggcggccggacgaaaaggccatcgctgctgaacagagaggaaacgactttatggatggg
gatgtggacgaccctgagtacaagcccgctccagccttgctaaaggatgatatggaggat
gatgcttcctctcctggagaactggttatcactgatgcagttggagaaggagggtctgtg
ttggatggcggaggtggaaatctgagtgccagcacggggatatactggccctcaccctcc
actttaactgcaagactccggcgtctgatcaccgcatctcagcgcttcaccaagagcaga
cagatacttcagatccaccagacacagacgcagaccacaaccccggccatctacactctg
ccccctatgctcaatgatgcacttaatcctaaaatggtggctaagattgaaagacaacag
cggtggacgcgaagggaggaggcagatttctaccgtgtggtttcaacatttggagtagta
tatgatccggatttgggccgtttcgactggaccaagtttagagccatggctcgactgcac
aagaaaactgacgagagtctacagaagtacctgtgtgcctttattgccatgtgcaggagg
gtctgccacctccctccaagagaaggagatatggtggacacctctcttgctattcagcca
atcacagaggagcgcgcgtcccgaactttataccgtgtggaattgttgcgtaaaataaga
gaacaggtgctgcgtcaccctcagctctatgagcgtctagccctctgccagtcaggacca
gatcttccagtgtggtgggaagcaggatcccacgatcgggatctcctcctcggagcggcc
aagcacggggtcagccggacagactaccacatcctccgtgacccggagctgtgctttatt
gcagcccaaaggaactacagccagaacaagggaagtgcaccaccagtccaagcccagaat
caggcaatgtcactggggcagtctcacgtcccgagcccccttcagcacgttttggctaaa
gacgctacagcttcaccgctctcttacccgagagaggattcaagcgaactgaaggaggag
ccgctgtcagacggagagatcaaaatggaaacgtcctctgtcagaccacccacaccatca
ggagtagaggtgaaagacggtgaccacaaagaagtagagagtgagagacgaatggtggcg
gctagaacaaaacctctcacgccaaactccgtggttcgaaagcagaaaaagctgagtaaa
cgcagccgcagggaggccaggagggcgtcgggatcagactcagactcggatggctcctcg
tccagttcttcgtcaagttcttcatcgagatcttcttcctcatcctcgtctacatcacgg
tcgggatctagttcctcttcctcatcttcctcctgttcctcaggttcgtcgtcttcttcg
tcgtcatcatcatcgtcctcagacaacagtgacagtgaggaggtaccaaagaatgtgtca
gcagtgtctggtgttaaaggctttgatgaagacagtgtggcctcagtcagcgctacacaa
gatgacatgcaagatagtcatgtgaccaacggtatctcaaaccctccccaccctttccag
ggaggatatatgctcgctgcctcctactggccaaaggaccgtgtcatgataaaccggttg
gacagtatatgtcaggcggtgttgaagggcaagtggccaggggttcggcgagcatacgaa
ggcaacgccgtgacttctttctacaccactaaactcctggacaacgcgggcactctggtg
gaggacccatcggcctcccctcagggttcaaaggtgaagaagcatgatgcagacagagaa
aaggagttctcagtcaaaatcaataacgaaggcagccttaaactgactttccagaagcag
ggcttgcctctgaagcgccccctggagggcgaggagggacctcttgcccagcagcagtac
ctagcccggctacaagaacttcagaatgcatccgataccagcctagtagactacaccaaa
acacagaacaactatccacaggggatgtccgggcatttgcgactgaatggaatgatggat
ggacagcctgccataaaaaagaaaagaggaaggcgaaagaacgtggaagggatggatctg
ctcttcatgaacaaaaacaggcctccaatgatggcagagcaggttcctgctggctggagt
ggtggtgtcgcaggcacgtctgctaccgccggttcaagcacacctcagggacctgggtct
ctagacacagagagccgcgttcccgtcatcagtctcaaagacggaacacgattggctgga
gaggacgctcctaaacggatagaactcgaccagtggctgaaggagcatccgggctttgtg
gcagatgtgggagcctttatccctagtacaaataaactgcagtttcaagatggcagacca
aaacaaaagagacatcgctgcagaaaccccaacaaaattgacatcaacagccttacagga
gaagagagagtgcagattatcaacaggcggaatgctcgcaagattggtggagcatttgct
cctccattaaaagatttatgtcggttcctgcaagaaaatccagagtatggggtcccaccc
gagtgggctgatgttgtcaaacagtcgggttatcttcctgaaagtatgttcgatcgcatc
ctgaccggcccaatcgttccagaagaggtgagccgacgaggtcgacgtcccaaaaacgct
cttgcaaaaccagccacagcggccagcgcaagtgccaatgcagctctgggactcaaccct
gtcctgaccaatggcctcctcggagggttggatctgcctagtcttcaagctcttcagcac
aaccttcagagcctccagtctcttcaactcatgggtctttctcacgacccaaccaacatg
gccgccatgtttccaatgatgctgtctggaatgcctgggctaccaaaccttctagggatg
agcggtctcctcggtggaaaagcttctgaggaagcggcaggcgttgctttaccgggcgat
gaggatgggagaaagaagagcagcgtagactcgaccgctcccaaaggttcggcccagacc
tcaagtcccgaccgtaaagcggaaaggacagaaggtcaaagttccaaagccaccacctcg
acggcaaccaactctaatcaaacaagtgcttctgcttcgggccaccaactggccttcaac
ccccttctcctctctagtatgctctacccagggatgcttctttctccaggccttaacctg
cctgtggccaatcagccgcaagctgcaaacactcagccaaccccacaacctgctgcctct
gaagccacgcccctacagcctggctgttcagaggagaaagacagtgacgaaggggaggag
cctgacgacaagaaggacatcagtggtccagagggctcggcgaaggcggagtcatcctcc
tccgagtccgacagctcctccgagtcatctgaggattccgattccagcgatgaagactga
DBGET
integrated database retrieval system
