Misgurnus anguillicaudatus (oriental weatherfish): 129444758
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Entry
129444758 CDS
T09481
Symbol
limch1a
Name
(RefSeq) LIM and calponin homology domains-containing protein 1a isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
manu04990
]
129444758 (limch1a)
Domain-containing proteins not elsewhere classified [BR:
manu04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
129444758 (limch1a)
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Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
129444758
NCBI-ProteinID:
XP_055061593
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All DBs
Position
3:complement(33881667..33940491)
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AA seq
1837 aa
AA seq
DB search
MASPEDDSASASQLDQAGSVENTPEPAFQEAQKWIEAVTGRGFGDKDFRSGLENGIMLCE
LLSAVKPGLVKKINRLPTPIAGLDNLTVFLRGCEELGLKGSQLFDPGDLQDTSIRANLTG
LDCTRKLKNVLITIYWLGKAANGCATYNGPTLNLKEFEGLLTMMRKECVSEELDSPKRSI
RDSGYIDSWESERSDSLSPPRHGREDSFDSLDSFGTRSQNTPSPDTVIRCNSDDSEGDSS
QRKLPDVRKDDMSARRVSYKEPRAALPFNQYLPNKSNQTTYLPAPLRKRRSEREEDRRSV
STSPVGGDRPLREESVGVLKQGAVVSRTPAFQKMLSWAGEKEVELEEAELKKFRKLEKAG
IKVLPAFVRYNSPNVVAVEADKAKPPSPDIILRRDNDFLRTAVPHEWDSNEEDDEEGPSK
VPDVQKDDLASRRARMNQFKPSVKHHFLPGSCSWKDREKWEGIRLASQHAVLERMEKMEQ
EKKSQADSASPEASIITRKDNPFLNPKKEREKERDEEDQREVEKRIAIPNLQKDDLAKRR
SGGGPRPPRDSHQSLVQSSITQSDLETWQRLKINTESSEADSALAEVSIITRKDNPFLTP
EKESESEEENKEVTDREAEGRVVVPNVEKDDLAKRRSQIGTTPQKDPRQSLTQTTMTQSD
LEKWQRLKMNTESSDEPIVPLCQTCLEKGCLSIASKAKVAKNDLAGCRERPSGERRRFVT
FGGVTEMESTSWKDEENEVGEEEGDEAEKLRYLLSIAPVAVPTIGLGSILTKRAVGSGNA
NPEPAIVLPPEPPSPLTFDLNRPSSSVQHRELEEQIAEKVKDERDGDDDDEEERQVDIEK
DDMMARRTGSFQKSARGAAYNRFLPLPGSKKEINAAASSAQKGSNQMGMSGERELQYLES
NIKTKRTKIGQRNEPADQQAPVAIVTQKSTDIVRSPATGVDRSGDYNEYDECWDKDPPPD
VEKDDMLARRTGGYQKLRVGTGQPFNAFLPSPGAVKQKTSPVPGLIQSKPREQETDSSLD
SFTLSSVAPPPRDAEDTPRKCPQMMDRQEAGSMGLVGKESLIKDETCTKSLTPMPEQASH
QQDVDDLPPIFRATSVSDERESVSLIDMRDEEDELAYLRPHSQSRHECLHNQYNKLREEE
DQWQDDLVRWKNRRRSASQDLIKKEEERKMMEKLMTTDGGSRHQRKSIKTYKEIVEEKER
REQELHEQYCRASTPEEKAAILQRYALRFTISDAILEKLQLPKLPSAATPVHTSPLHQPV
KAPAHTKEAEVPKPTQTSPTQPIDHTDQEIAQNQALENPKTSEQSLTKTQEVPSAPFRPL
PPSSKASSKPVPLITPKPYSQPKFNQGPRKSLKTDGLVRLNGESTQDDSRESDAKRSPVR
SVPFTSTPLKPVTSSQSNEEKTVLETSHDQQNSQTSVPDQEKEDVKEEKENSPHIQEENS
KEEISTTLSDSETAGKQSYPETVVKRNCVVTMTIVTELTQTHPIQPNDTPSTEQLCGSVP
NSCDLNSTESSKADQTSYSQSLTEGIDYSSECIETPMLNLAKRVDHWTWDPNEERRRQEK
WQQEQERLLQEKYQREQEKLKEEWERAQREVEEEERRHHEEERRILEETVTPLTPRTSVL
PSASVTQPPQDTIVLSLADWDRKQEMLERQSQTNQSNGLTDSPDQVITPAQQNGQRSEPQ
ESQTAIPQLQFIQDGTWSCKSKGRQEDLKKTASLDRNQTPPQSQSTGMRRTGSCENVLGT
HPSNSPPPSQDTSPPSPSRSISGKKLCSSCAHPLGKGAAMIIETLGLYFHIQCFKCGICR
GLLGDTSAGTDVRIRNGLLNCQECYIKSRAAGQPTTL
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcctgaagacgattcagcatcggcttcccaattagatcaagccggatctgta
gaaaatacgcctgaaccagcatttcaagaagcacagaaatggatcgaggcagtgacagga
agaggattcggtgacaaggatttcagaagtggactggagaatggcattatgctttgcgag
ttgctgagtgcggtcaaaccaggccttgtgaaaaagatcaacagacttccaacacccatt
gctggactagataatctgaccgtgtttctgagaggatgtgaagagttgggactgaagggc
tcacagctctttgatccaggagacctgcaagatacgtcgatacgagcaaacctaacgggc
ttagactgcactagaaaactgaagaatgtgcttataactatatactggcttggtaaagct
gctaacggctgtgctacctataatggcccgacactcaacctgaaagagtttgagggactc
cttaccatgatgcgaaaggagtgtgtaagtgaagagttggactcccctaagcgcagcata
agggacagtggttacatagacagctgggaatcggagcggtcggattcgctgtctcctccg
aggcatggccgtgaagattcgttcgacagtctcgactcatttggcacccgatcgcagaac
acaccgtctccagacactgttattcgctgcaatagtgatgactctgaaggtgacagcagt
caaagaaagttgccggacgttcgtaaggacgacatgtctgcccgacgtgtctcttacaaa
gaaccccgtgccgcccttcccttcaatcagtacctgccgaacaaaagcaaccagaccacc
taccttcctgcccccctgaggaagaggaggagcgagagagaggaagataggaggagtgta
tcaacatctcctgtagggggcgacagacctctcagagaagaaagtgtaggggtgttaaaa
cagggggctgtcgtgtctcgaacccctgcgttccagaaaatgctcagctgggcgggtgaa
aaagaggtggagctggaggaggcggagctcaagaaatttagaaagttggaaaaggcgggg
attaaagtattacccgcttttgtgcgatacaacagtcctaacgtggttgccgtggaggct
gataaagctaaaccgccctctcctgacatcattctccggcgtgacaatgacttcctgcgg
accgccgtcccacatgagtgggactcgaatgaggaagatgacgaagagggacccagtaag
gttccagatgttcaaaaggatgaccttgcttctcgcagagctcgcatgaatcagttcaaa
cccagtgtgaagcatcacttcctgccgggatcttgtagctggaaggaccgagaaaaatgg
gaaggaatcagactggcatcccagcatgctgtactggagaggatggagaagatggaacag
gagaaaaaaagtcaggctgactccgcctcccctgaggcgtcaatcataactcgtaaggac
aatcctttcctgaatcctaaaaaagagagagaaaaagaaagagatgaggaagatcagaga
gaggtagaaaagaggatagccatcccaaaccttcagaaagacgatctggcgaagaggcgg
tctggaggggggccacgcccacccagagattcccatcagtcattggtccagtcttccatc
actcagtcagacctggagacatggcagagactcaagataaatacagagagcagcgaagct
gactccgcccttgcagaagtgtcaatcataactcgcaaggacaaccccttcctgacccct
gagaaagagagtgaaagtgaggaggagaataaggaggtgacagacagagaggcagagggt
agggtggtggtacctaatgtagagaaagatgacctggccaaaaggcggagccagattggg
accaccccacagaaagatcctcggcagtcattgactcaaacgaccatgactcagtcagac
ctggagaagtggcagagactcaagatgaatacagaaagcagcgacgagcccattgtccct
ctatgtcagacgtgtcttgagaaaggctgcctctctatcgcctccaaggcgaaggttgcc
aagaacgacctggccggttgccgggaacgtccctccggtgaacggcggcgttttgtgaca
tttgggggagtgaccgagatggagagtacctcctggaaagatgaggagaatgaagtagga
gaggaagagggagatgaggcagagaaacttcgatatctgctttcgattgcacctgttgct
gtgcccaccatagggctgggctccatactgacaaagagagcagtcggcagtggaaacgca
aaccctgagcctgccatagttctgccccctgaaccgccgagccctctcacctttgacctc
aaccgaccctcgagctccgtgcaacacagggagctggaggagcagatagctgagaaagtg
aaagatgagagggatggtgatgatgatgatgaagaggagaggcaggtggatatagaaaag
gacgacatgatggctcgtaggacagggtcgtttcagaagtcagcaaggggagcggcctac
aaccgatttctcccgctgccaggatctaagaaggagataaatgcagcggcttcctcagcc
caaaaaggaagtaaccagatgggtatgagcggagagagagaactccaatatctggaaagt
aacataaagacaaagagaaccaaaattggacagagaaatgaaccagctgaccaacaagct
ccggttgccatagttacccaaaagagcacagacatagtgcgatcacccgccaccggtgtt
gaccgctctggcgattacaatgaatacgatgagtgttgggataaagatccaccacctgac
gttgagaaggacgacatgcttgcacgtaggaccggaggttaccaaaaactaagagtggga
acgggacaaccttttaatgcgtttcttccgagtcctggtgctgtcaaacagaaaacctct
cctgttcctggattgatccagtctaagcctagagagcaggaaacagattcatctctggac
agcttcacccttagctctgtggccccgcccccaagggatgctgaggacacgcctaggaag
tgccctcagatgatggacaggcaggaggcaggctctatgggtttggtgggaaaggaaagt
cttattaaagacgagacttgtaccaaaagcctcacccccatgcctgaacaagcctcacat
cagcaggacgttgatgatctacccccaatattcagagctactagtgtttctgatgaacga
gagagtgtgagtttgattgacatgcgcgatgaagaggatgagttggcctaccttcggccg
cacagccaatcgcgacacgagtgcctgcacaaccagtacaacaaactcagagaggaggag
gaccagtggcaagatgacctggttcgatggaagaatcggagacggagtgcctctcaggat
ctgatcaaaaaggaggaagagaggaagatgatggagaagctgatgaccacggatggagga
tctcgccatcagaggaagagcatcaaaacatacaaagagatcgtagaggaaaaagagcgt
cgggaacaagagctacatgaacagtactgtagggcctccaccccagaggagaaagcagcc
atacttcagcgctacgctctccgtttcaccatcagtgatgccatattggaaaagctccaa
ctccctaaactgccttccgctgctacgcccgtacacacctcgcctctccaccaacctgtg
aaagcgcccgcacacacaaaagaagcagaggttcctaagcctacacaaacctccccaaca
caacccatcgaccatacagaccaggagattgcacaaaatcaggcgctggaaaatcccaaa
acatcggaacaatcacttaccaaaactcaagaagtgccatcggcgcctttccgtccactc
cctccttcctcaaaggcttcctcaaagcctgtgccccttatcaccccaaaaccctacagc
cagcccaaattcaaccagggaccacgcaagtctctgaagactgatgggctggtgcgtttg
aatggtgagagcactcaggacgacagcagagagagcgatgctaaaaggtctccggtgcgt
tctgtccccttcacctccacacctctgaagccagtcacttccagtcaatcaaatgaggag
aaaactgtattagagacctcgcatgaccaacagaactcacagacttcagttcctgaccag
gagaaagaagatgtaaaggaggaaaaggaaaattctcctcacattcaagaagaaaacagc
aaggaagagatctcgactacactgtcagactcggaaacagcaggaaaacagtcatatcct
gaaacagtggtgaagcgtaactgcgttgtcacgatgaccattgtgacagaactcactcag
acacaccccatccaaccaaatgacacgcccagcacagagcagctttgtggttcagtccca
aattcatgtgatttaaactccactgagtccagtaaagctgaccagacttcatactcacag
tcactaacagaggggatcgattactccagtgaatgtattgaaaccccaatgttgaacctt
gctaaaagggttgatcactggacgtgggatcccaatgaggagcgcagacggcaggagaaa
tggcaacaagagcaggagcgactgctgcaggaaaaatatcaaagagagcaggagaagctg
aaggaggagtgggagagagcacagagggaagttgaggaggaagagaggagacatcacgag
gaggagagacggattctggaggaaaccgtgaccccactgacccctcgcacctcagttttg
ccctccgcaagtgtgacacagccaccacaggacactattgtcctgtcattggctgactgg
gacaggaaacaggaaatgctggagagacagtcacagacgaaccagagtaatggactgaca
gacagtcctgatcaagttatcacaccagctcagcagaatggccagagaagtgaacctcag
gagagccaaactgctataccacaactacagtttatacaagacggcacatggagttgcaaa
tctaagggcagacaagaagatttgaagaaaactgcctcactggaccgtaaccaaactcca
ccccagagtcagtccacagggatgaggaggactgggtcgtgtgaaaatgttttaggaaca
catccatcaaattcacccccaccctcacaagacacatcgcctccatcacccagcaggtca
ataagtggaaagaagctttgctccagttgtgcacatccattgggcaaaggagcggctatg
atcatagaaaccttagggctgtacttccatattcagtgttttaagtgcgggatatgcaga
ggtctgcttggtgacacaagtgccgggacggatgtcagaattcgaaacggacttcttaat
tgtcaggaatgttacataaaatcacgggctgctggccagccaacaacattgtga
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integrated database retrieval system
