Misgurnus anguillicaudatus (oriental weatherfish): 129444825
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Entry
129444825 CDS
T09481
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129444825 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129444825 (fip1l1b)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129444825 (fip1l1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
129444825
NCBI-ProteinID:
XP_073722092
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All DBs
Position
3:complement(37229625..37237965)
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AA seq
569 aa
AA seq
DB search
MSAEEADKTTTTDASAGDEEEEWLYGEEGESKETEEEEAKLTAAISGSTASAPPVSEEVT
ANSVTTPTTTTGNGETSQETSQNTEETPGEDEDSESDSDDDDDDVRVTIGDIKTGAPQYT
AYAAPVNLNIKTAGRPYGAVGSKVKGVDLEAPGSINGVPVLEVDMESFEEKPWRKPGADL
SDYFNYGFNEDTWKAYCEKQKRLRMGLDILNIGSTTSKISVQQGRTGNTEKEITIPSHTS
KAEFISPSTLYKTGLNPARISPPQWAGPAIQEMSFNTKTSGTIDVIGGGTATISRVEGRR
RHNLEGNNIQVISDHSTSDAEPTVAKMPPPFFPPGPLPPNMPPPPFLPPPVSQAPSLLPP
PRMPITVPPPNFPPPNAGPPPSLIPTLDNSGHPGGYDGRPVAPYPFPTGGFPPPMPGPVN
PWPGMMDNSKPWDYYPRRDKEREKERERDRQRERVHDRDHSPSSVVYNSALGLCSDEERY
RYRDYADRGYERHRERASREKEERHRERRHREKEEGRHKSSRSSSRRRHDSEEGDSHRRH
KHKKSKRSKEGKEPSEELSGEQENQEAME
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagaggaggcggacaaaaccaccaccactgatgctagtgcaggagacgaggag
gaggaatggctgtacggagaggaaggtgaaagtaaggaaactgaagaagaggaggccaaa
ctgacagcagccatcagtggcagcacagcctccgctcctcctgttagtgaggaggtcact
gccaacagtgtcaccaccccaaccaccaccactggaaatggagagaccagtcaggaaacc
agccagaacactgaggaaacaccaggagaggatgaagacagtgagagtgacagcgacgac
gatgatgatgatgtacgtgtcaccatcggagacatcaaaacgggagcaccacaatatacg
gcatatgcagctccagtgaatctgaacataaaaacagctggcagaccgtatggagcagta
ggtagcaaagtgaaaggtgtcgacctcgaagctccgggcagcatcaatggcgttccggtc
ctggaagtggacatggagtcctttgaggagaaaccatggagaaaaccaggtgcggacttg
tctgactattttaactatggttttaatgaggacacatggaaagcatattgtgaaaagcag
aaaaggctacggatgggccttgacattctcaacatcggatctaccaccagcaagatctca
gtgcagcagggccgcacaggtaacactgagaaggagattacaataccatctcatacgtct
aaagcagaattcatctctccatccacactgtataaaacaggacttaatccagctaggata
tcccctccacagtgggcggggcctgccattcaagaaatgtcctttaatacaaagacgagc
ggaaccatagatgtgattggcggagggactgccaccattagtagggtggaaggacgacgt
cgccacaatctggaggggaataacatccaggtgatctctgaccattccacctcggatgca
gaacccacagtggctaagatgccgcctcctttctttcctcctgggccactccctccaaac
atgccccctcctccattcctccctcctcctgtcagccaagccccgtctctgttaccacct
ccaaggatgcccatcactgttcctccacccaattttccccctcccaatgctggacctcca
ccttcacttattcctactttggacaatagtgggcatccaggaggatatgatggacgtcct
gtcgctccctaccctttccctacaggtgggtttcctccacccatgccaggacctgttaac
ccctggcctggtatgatggacaactctaagccgtgggactattaccctagacgagacaaa
gagagggaaaaggaacgggagagggacaggcaaagggaacgagtccatgacagagatcat
agtccctcctctgtggtttataacagtgcactgggtctttgcagtgatgaagagcgatat
cgttaccgtgactacgcggacagagggtacgagaggcatcgcgagcgagcgagccgtgag
aaggaagagcgtcacagggagaggagacacagagagaaagaagaagggagacacaagtca
tcacggagtagtagcaggcggaggcatgatagtgaggaaggcgacagtcaccggcgccat
aagcacaagaagtccaagaggagtaaagagggcaaggaacccagcgaggagctttccggt
gaacaggagaaccaggaggccatggagtaa
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