Misgurnus anguillicaudatus (oriental weatherfish): 129444975
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Entry
129444975 CDS
T09481
Symbol
palb2
Name
(RefSeq) uncharacterized protein palb2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03440
Homologous recombination
manu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129444975 (palb2)
03460 Fanconi anemia pathway
129444975 (palb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manu03400
]
129444975 (palb2)
DNA repair and recombination proteins [BR:
manu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
129444975 (palb2)
FA (Fanconi anemia) pathway
Downstream FA components
129444975 (palb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
129444975
NCBI-ProteinID:
XP_055061993
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All DBs
Position
6:complement(41738228..41746605)
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AA seq
1294 aa
AA seq
DB search
MEEDIHPNDDQEASLHVLKLRRRLELLKQEYERTAVRLQRAERLDAIRRQSNVSHQNNET
SACLTSSSVAASELSDNQNAQHLQTALQFQLAEIALAPHLSSPACMRSPAHRLRSKRSRL
RLQNKERESDTDNSQEKESLKQGNNGGGENKADMRKERHMGMLPAKVEKNQDNDTIAEEP
QELKVVNCENKPLVLCKNKHLPFQSQMNICQESLPLIHHSVEKLQSKTAACKDSMQASSS
LPSCESVHNITVKSEANLAQMDAYKGNNDSTDNKHSLIMSGALDSCTLVEGLPFPVEYYI
RTTRRMAASHSPVNLEAVIHSQLTRGRGRRRLGQSQTRGRGHTTSEHSESVCRSNDQAGR
RGNGQRRRRGRRRATTVRTKDAQDCIISNPVSDSQASIEPLTVSTPQTESSCQSEVEGRP
QAESQPIPSLVSAVNLTPSKEERVTQDFKHLPDSQLYFESKLLPDSNLYPIFRRGRGQTG
NHLSPSQTSMCKNDQSPLLPSLASLIQALQDQDTKNELLAAVDVQDFHLPDEDFGQLKLE
RLQLSTSLVEPYVQRVYNTRRSNRRQTASGKKSNFEVFCGELFAPEAPTTSALEDSLPLC
QSDPTDQSQTEKQNTIQSDKHPVNKPSVISYDLTESVKEQTLTIAKTDETEQEAVILTEK
HTASIDQMQTETETKNVNMLDINPQVESHKRTDTLLENHILCPALLDLSPSLTSHTPRGQ
YSPLPSLGMTPYFVSSGSPTDPQTRLLSPANSCRSPSLNIPTGSVSPDSVSSKQFGNVKA
DTFMKSSDPTEVEDTVAKNPTNVSQEIMMGARNDAEPTQNNTVMGHENFITPETELNVLC
ILGSEEKHECSFDTDCKSKINCTPEIEAQLNPDIQNNPETKDESFRAESQSYMDMNRSRC
GNESGCAGQTSNEASTNQKTEEKTVCITNVDEAMENGTDSCNTITLLNENPVSSTTFPDA
GHCSSMLQEMHTFKALEGGCVLDLCLVRWSTEDWCICVAGEWSVCVWIHKKGVQPWGLVH
TWTFAQSVMSLQAIPDSSGLVCVTLGHLEITEARLLACPSMDGPFTQTLVCKDALQAVVG
VSDCRLVCCSASEDQQKVTVKTFNKEGRVVSTLPMDSVKQNIRTLAAIEEEKDALIGWTE
CKTVLIWNMKSGHLLQSILLEKTLTMTNCMKGYSYRGVLCILLQNTGNVCDERRETSLFA
LIATNPLTGKHITLTSISSPAQHIQQLIDGDVLGSELVGVFQSGHVAVWNLKSRVAKVVG
VLDELCRLARWAGPDTLLTGYLNGDVSVFQYKTL
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagatattcaccctaacgacgaccaagaggcatctttacatgttttaaagttg
aggagaagactggagctactgaagcaggagtatgagaggacagcagtgagattacagaga
gcagaacgcctggatgctattcgcaggcagagcaacgtctctcaccagaacaatgaaaca
tcagcgtgtttaacatcttcctctgtggcagcttctgaactttctgacaaccaaaatgct
cagcacttacaaaccgccctccagtttcaacttgctgagattgctcttgctcctcatttg
tcatctcctgcatgcatgcgaagccccgcccaccgtctgcgctctaagcgcagccgtctg
cgcctgcagaacaaagagcgagagtcggatactgacaacagccaagagaaagaaagtctc
aaacagggaaataatggaggtggagaaaataaggctgacatgagaaaagaaagacatatg
gggatgttgccagccaaggtggagaaaaaccaggacaatgatacaattgctgaagaacca
caggagctaaaggttgtgaactgtgaaaacaagccactggttttatgtaaaaataaacat
ttaccctttcagagtcagatgaatatatgccaagaaagtctgcctcttatccatcattcg
gtagagaagttacagtcaaaaacagctgcatgtaaggactccatgcaagcctcttcttct
ctcccgtcatgtgagtcagtccataatattactgttaaatcagaagcgaaccttgcacaa
atggatgcatataaaggaaataatgacagcacagataataaacactctttaattatgtct
ggagctctggattcttgtacgctggttgaaggcttaccatttcccgtggagtattatatc
cgaacaacacgtcgtatggctgcatctcacagtcctgtcaacctagaggctgttattcac
agccagctcactcgggggcggggcagacgcaggctcggccaatcacaaacacgtggtaga
ggtcacacgacctcagaacattcagaatcggtatgcaggtccaatgaccaggccggacgt
agaggaaatggtcagaggaggaggagagggcgtcgtagagcaaccacagttaggaccaaa
gatgctcaagattgtataatatcaaatcctgtaagtgattcgcaagcctctatagaaccc
cttacagtatccacacctcagactgaatcttcctgtcaatcagaagtggagggaaggcca
caagcggagtctcagccaatcccgtcgctcgtgtctgcggttaatttgacgcccagtaaa
gaagaaagagttacacaagattttaagcaccttccagattctcagctttactttgagtcc
aaactccttccggattctaacttgtatcctattttcagaagggggcgtggccaaactgga
aatcatttatctccgtcccagacaagtatgtgtaaaaacgatcaatcacctcttctgcca
tcattagcttcacttattcaagctcttcaagaccaagacacgaaaaatgaactgctggca
gctgttgacgtccaggatttccacctaccagatgaggattttggccagctgaagttggag
agactgcagttgtccacgtcacttgtggaaccgtatgtccagcgtgtatacaacacacgc
cggagcaacaggcgccagacagcgagcggcaaaaagagtaactttgaagttttctgcgga
gaactttttgctccggaagccccaactacctctgccctcgaagacagtttgcctctttgt
cagtcagaccccaccgaccaatcgcagactgagaaacaaaacactatccaatcagacaag
caccctgtaaacaaaccaagcgtcatttcctacgatctgacagaaagtgtaaaggaacaa
actttgacaatagccaaaacagatgagactgaacaggaagcagttattttaacagagaaa
cacaccgccagcattgatcagatgcaaacagagacagaaaccaaaaatgttaatatgctt
gacataaaccctcaggtcgaatcacacaagcgaacagatactctcttggaaaaccacatt
ttgtgcccagcgttactagatctgagtccatcattgacctcacacactccgaggggtcaa
tactctcccctaccatctttaggaatgaccccatattttgtaagctcaggttcacccaca
gaccctcaaacacgtctcctttctcctgctaatagctgtagatctccctctttaaacata
cctacaggttctgtgtctccagattcggtctcatctaaacaatttgggaatgtcaaggcc
gatacctttatgaaaagttcagacccaaccgaagtggaggatactgtcgcaaagaatcca
acaaacgtcagtcaagaaattatgatgggagctcgaaatgatgcagaaccaacccaaaac
aacactgtaatgggacatgagaactttatcacaccagaaaccgaattgaacgttttatgc
attttgggaagtgaagagaagcatgaatgcagttttgatacagattgtaaaagtaaaatc
aattgcactcctgaaattgaagctcagcttaaccctgatatccagaacaatcctgaaact
aaagatgaaagctttagggctgaatctcaaagttatatggatatgaatcggtctcggtgt
ggaaatgaatctggttgtgcaggtcaaacttctaacgaggcctccaccaatcagaaaact
gaagaaaagacagtttgcatcactaatgtagatgaagcaatggaaaatggcactgattcg
tgcaatactataacactactaaatgaaaatccggtatcttccacaacctttcctgatgca
ggccattgttcatccatgctgcaggaaatgcacacttttaaggccctggagggtggatgt
gtgttggatttgtgtttggtgcgatggtcgacggaggactggtgcatatgtgtggcagga
gaatggagcgtttgcgtttggattcacaagaagggagttcaaccgtggggtcttgtacac
acctggacatttgcacagtctgtcatgtccttgcaagctattcctgattcttcaggtctg
gtttgtgtcactctgggtcacttagaaatcacagaagcaagacttcttgcctgtccaagt
atggatggaccgttcacacagactttagtatgcaaagatgctttacaagcagttgtgggg
gtgtctgactgtcggcttgtgtgttgctccgcctctgaagatcagcagaaagtcactgtg
aaaacgttcaataaggaaggaagggtagtgagcactcttcccatggactccgtaaagcag
aacattcggacacttgcagccatagaagaggagaaagatgctctgattggttggacagaa
tgtaaaaccgtccttatatggaatatgaagtcaggccatttgcttcagagtattctcctg
gaaaagaccttaacaatgacgaactgcatgaagggatattcttacaggggagtgctttgt
atattacttcagaatactgggaatgtgtgtgatgaaaggcgtgaaacatccctttttgct
ctgattgctacgaatcccctgactggcaaacacatcacattgacgtctatcagcagtccc
gctcaacatatacaacagttgatagatggtgatgtcttaggctctgagcttgttggcgtt
ttccagtctggtcatgttgctgtttggaatctcaaaagcagggtggctaaagttgttggt
gtgctagatgagttgtgtcgactagcgcggtgggcagggcctgacacactactgactggg
tatctgaacggggatgttagcgtgtttcagtacaaaactttgtaa
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