Misgurnus anguillicaudatus (oriental weatherfish): 129444975
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Entry
129444975 CDS
T09481
Name
(RefSeq) uncharacterized protein isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03440
Homologous recombination
manu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129444975
03460 Fanconi anemia pathway
129444975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manu03400
]
129444975
DNA repair and recombination proteins [BR:
manu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
129444975
FA (Fanconi anemia) pathway
Downstream FA components
129444975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
DUF7385
Motif
Other DBs
NCBI-GeneID:
129444975
NCBI-ProteinID:
XP_055061995
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All DBs
Position
3:complement(41484900..41492633)
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AA seq
1294 aa
AA seq
DB search
MEEDIHPNDDQEASLHVLKLRRRLELLKQEYERTAVRLQRAERLDAIRRQSNVSHQNNET
SACLTSSSVAASELSDNQNAQHLQTALQFQLAEIALAPHLSSPACMRSPAHRLRSKRSRL
RLQNKERESDTDNSQEKESLKQGNNGGGENKADMRKERHMGMLPAKVEKNQDNYAIAEEL
QELKVGNCENKPMVLGKKKHLPFQSQMNICQESLPPIHHSVEKLQSKTAACKDSMQASSS
FPSCESVHSITVKSEANLAQMDAYKGNNDSTDNKHSLIMSGALDSCTLVEGLPFPVEYYI
RTTRRMAASHSPVNLEAVIHSQLTRGRGRRRLGQSQTRGRGHTTSELSESVCRSNDQAGR
RGNGQRRRRGRRRATTVRTKDAQDCIISNPVSDSQASIEPLTVSTPQTESSCQSEVEGRP
QAESQPIPSLVSAVNLTPSKEERVTQDFKHLPDSQLYFESKLLPDSNLYPIFRRGRGQTG
NHLSPSQTSMCKNDQSPLLPSLASLIQALQDQDTKNELLAAVDIQDFHLPDEDFGQLKLE
RLQLSTSLVEPYVQRVYNTRRSNRRQTASGKKSNCEVFCGELFAPEAPTSSALEDSLPLC
QSDPTDQSQTEKQNTIQSDKHLVNKPSVMSYDLTESVKEQTLTIAKTDETEQEAVILTEK
HTASIDQMQTETETKNVNMLDINPQVESHKRTDTLLENHSLCPALLDLSPSLTSHTPRGQ
YSPLPSLGMTPYFVSPGSPTDPQTRLLSPANSCRSPSLNIPTGSVSPDSVSSKQFGNVKA
DTFMKSSDPTEVEDTVAKNPTNVSQEIMMGARNDAEPTQNNTVMGHENFITPETELHVLC
ILGSEEKHECSFDTDCKSKINCTPEIEAQLNPDIQNNPETKDESFRAESQSYMDMNRSRC
GNESGCAGQTSNEASTNQKTEEKTVCITNVDEAMENGTDSCNTITLLNENPVSSTTFPDA
GHCSSMLQEMHTFKALEGGCVLDLCLVRWSTEDWCICVAGEWSVCVWIHKKGVQPWGLVH
TWTFAQSVMSLQAIPDSSGLVCVTLGHLEITEARLLACPSMDGPFTQTLVCKDALQAVVG
VSDCRLVCCSASEDQQKVTVKTFNKEGRVVSTLPMDSVKQNIRTLAAIEEEKDALIGWTE
CKTILIWNMKSGHLLQSILLEKTLTMTNCMKGYSYRGVLCILLQNTGNVCDERRETTLFA
LIATNPLTGKHITLTSISSPAQHIQQLIDGDVLGSELVGVFQSGHVAVWNLKSRVAKVVG
VLDELCRLARWAGPDTLLTGYLNGDVSVFQYKTL
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagatattcaccctaacgacgaccaagaggcatctttacatgttttaaagttg
aggagaagactggagctactgaagcaggagtatgagaggacagcagtgagattacagaga
gcagaacgcctggatgctattcgcaggcagagcaacgtctctcaccagaacaatgaaaca
tcagcgtgtttaacatcttcctctgtggcagcttctgaactttctgacaaccaaaatgct
cagcacttacaaaccgccctccagtttcaacttgctgagattgctcttgctcctcatttg
tcatctcctgcatgcatgcgaagccccgcccaccgcctgcgctctaagcgcagccggctg
cgcctgcagaacaaagagcgagagtcggatactgacaacagccaagagaaagaaagtctc
aaacagggaaataatggaggtggagaaaataaggctgacatgagaaaagaaagacatatg
gggatgttgccagccaaggttgagaaaaaccaggacaactatgcaattgctgaagaacta
caagagctaaaggttgggaactgtgaaaacaagccaatggttttaggtaaaaagaaacat
ttaccctttcagagtcagatgaatatatgccaggaaagtctgcctcctatccatcattcg
gtagagaagttacagtcaaaaacagctgcatgtaaggactccatgcaagcctcttcttct
ttcccgtcatgtgagtcagtccatagtattactgttaaatcagaagcgaaccttgcacaa
atggatgcatataaaggaaataatgacagcacagataataaacactctttaattatgtct
ggagctctggattcttgtacgctggttgaaggcttaccatttcccgtggagtattatatc
cgaacaacacgtcgtatggctgcatctcacagtcctgtcaacctagaggctgtcattcac
agccagctcactcgggggcggggcagacgcaggctcggccaatcacaaacgcgtggtaga
ggtcacacgacctcagaactttcagaatcggtatgcaggtccaatgaccaggccggacgt
agaggaaatggtcagaggaggaggagagggcgtcgtagagcaaccacagttaggaccaaa
gatgctcaagattgtataatatcaaatcctgtaagtgattcgcaagcctctatagaaccc
cttacagtatccacacctcagactgaatcttcctgtcaatcagaagtggagggaaggcca
caagcggagtctcagccaatcccgtcgctcgtgtctgcggttaatttgacgcccagtaaa
gaagaaagagttacacaagattttaagcaccttccagattctcagctttactttgagtcc
aaactccttccggattctaacttgtatcctattttcagaagggggcgtggccaaactgga
aatcatttatctccgtcccagacaagtatgtgtaaaaacgatcaatcacctcttctgcca
tcattagcttcacttattcaagctcttcaagaccaagacacgaaaaatgagctgctggcg
gctgttgacatccaggatttccacctaccagatgaggattttggccagctgaagttggag
agactgcagttgtccacgtcacttgtggaaccgtatgtccagcgtgtatacaacacacgc
cggagcaacaggcgccagacagcgagcggcaaaaagagtaactgtgaagttttctgcgga
gaactttttgctccagaagccccaacttcctctgccctcgaagacagtttgcctctttgt
cagtcagaccccaccgaccaatcgcagactgagaaacaaaacactatccaatcagacaag
catcttgtaaacaaaccaagcgtcatgtcctacgatctgacagaaagtgtaaaggaacaa
actttgacaatagccaaaacagatgagactgaacaggaagcagttattttaacagagaaa
cacaccgccagcattgatcagatgcaaacagagacagaaaccaaaaatgttaatatgctt
gacataaaccctcaggtcgaatcacacaagcgaacagatactctcttggaaaaccactct
ttgtgcccagcgttactagatctgagtccatcattgacctcacacactccgaggggtcaa
tactctcccctaccatctttaggaatgactccatattttgtaagcccaggttcaccaaca
gaccctcaaacacgtctcctttctcctgctaatagctgtagatctccctctttaaacata
cctacaggttctgtgtctccagattcggtctcatctaaacaatttgggaatgtcaaggcc
gatacctttatgaaaagttcagacccaaccgaagtggaggatactgtcgcaaagaatcca
acaaacgtcagtcaagaaattatgatgggagctcgaaatgatgcagaaccaacccaaaac
aacactgtaatgggacatgagaactttatcacaccagaaaccgaattgcacgttttatgc
attttgggaagtgaagagaagcatgaatgcagttttgatacagattgtaaaagtaaaatc
aattgcactcctgaaattgaagctcagcttaaccctgatatccagaacaatcctgaaact
aaagatgaaagctttagggctgaatctcaaagttatatggatatgaatcggtctcggtgt
ggaaatgaatctggttgtgcaggtcaaacttccaacgaggcctccaccaatcagaaaact
gaagaaaagacagtttgcatcactaatgtggatgaagcaatggaaaatggcactgattcg
tgcaatactataacactactaaatgaaaatccggtatcttccacaacctttcctgatgca
ggccattgttcatccatgctgcaggaaatgcacacttttaaggccctggagggtggatgt
gtgttggatttgtgtttggtgcgatggtcgacggaggactggtgcatatgtgtggcagga
gaatggagcgtttgcgtttggattcacaagaagggagttcaaccgtggggtcttgtacac
acctggacatttgcacagtctgtcatgtccttgcaagctattcctgattcttcaggtctg
gtttgtgtcactctgggtcacttagaaatcacagaagcaagacttcttgcctgtccaagt
atggatggaccgttcacacagactttagtatgcaaagatgctttacaagcagttgtgggg
gtgtctgactgtcgacttgtgtgttgctccgcctctgaagatcagcagaaagtcactgtg
aaaacgttcaataaggaaggaagggtagtgagcactcttcccatggactccgtaaagcag
aacattcggacacttgcagccatagaagaggagaaagatgctctgattggttggacagaa
tgtaaaaccatccttatatggaatatgaagtcaggccatttgcttcagagtattctcctg
gaaaagactttaacaatgacgaactgcatgaagggatattcttacaggggagtgctttgt
atattacttcagaatactgggaatgtgtgtgatgaaaggcgtgaaacaaccctttttgct
ctgattgctacgaatcccctgactggcaaacacatcacattgacgtctatcagcagtccc
gctcaacatatacaacagttgatagatggtgatgtcttaggctctgagcttgttggcgtt
ttccagtctggtcatgttgctgtttggaatctcaaaagcagggtggctaaagttgttggt
gtgctagatgagttgtgtcgactagcgcggtgggcagggcctgacacactactgactggg
tatctgaacggggatgttagcgtgtttcagtacaaaactttgtaa
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