Misgurnus anguillicaudatus (oriental weatherfish): 129445793
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Entry
129445793 CDS
T09481
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
manu03021
]
129445793 (chd1)
03036 Chromosome and associated proteins [BR:
manu03036
]
129445793 (chd1)
Transcription machinery [BR:
manu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
129445793 (chd1)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
129445793 (chd1)
SLIK complex
129445793 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
129445793
NCBI-ProteinID:
XP_073730044
LinkDB
All DBs
Position
12:10895222..10928399
Genome browser
AA seq
1795 aa
AA seq
DB search
MDGRSEDESASNSSGESSNSDDESKSGSGSGSSSSSSSSSSSQSGSSESGSGSDSGSQSD
SDSEKSKEKNNQENKIDGAAFWKSNPSILTVQRSAMLRKQQLQQQQLHHPPQSSSNSGSD
EDSSSSDDSDDDSKSKSKGSGSDSDSGSDSGSGSSSASSAEEGNSEESMSDYEPSLKVKS
RKPPNKSNARNGKKSKASKKPPRSSSDDEDDYKKALAGPRRQATVNVSYKEDDELKTDSD
DLVEVCGEDVPPPEEDEYETLERVMEMRIGQKGVTGAITTVYAVEADGDPNANFDPSRQS
GEVQYLIKWKNWSHIHNTWETEETLKQQNVKGMKKLDNFKKKEQDRKKWLKTASPEDVEY
LNCQQELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLSYSECSWEDGALIARKF
QKCITEYMSRNQCKNIPSRDCKVLKQRPRFVPMKKQPSYICVEGLELRDYQLDGLNWMAH
SWCKGNSCILADEMGLGKTIQTISFLNYLFNEHQLYGPFLLVVPLSTLTSWQREIQLWAS
QMNVVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGNVSWAFIGVD
EAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFHSWELFEEE
HGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQYYKWILTRNY
KALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPEENEFYNRQEGLQHLIRSSGKLVLLD
KLLVRLKERGHRVLIFSQMVRMLDILAEYLKSRQFLFQRLDGSIKGEMRKQALDHFNAEG
SEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVT
KGSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSTPFNKEELSAILKFGAE
ELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFSMMDEEEIDM
DTDRNNRNWDDIIPEEQRRRLEEEERQKELAEIYLLPRMRKCAKQISFNGNESRRSRNRL
RYSASDSDSGTDRKRPKKRGRPRTIPRENIKGFTDAEIRRFIKSYKKFGGPLERLDAIAR
DAELVDKSEHDLRRLAETVHNGCLKTLKENPCGPERTSGGRRGKVKGPTFRISGVQVNAK
LVISHEEELAPLHKAIPADAEERKRYMIPCHSKAAHFDIEWGKEDDSSLLIGIYEYGYGS
WEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQKQAGSANSR
KRKPRGKKNKAVKPKVDELMNSLSSAPPSDKSSEDEEEKEDEEKETALVKLPSRRARVTE
RAVEEEEEEEEDESEEEEEPEIKEEEEEEEIKEKVVKKEIKKEKKEEGRDSKEKELKEKE
IKQDPVLEEEEEETTIEAVEVKAEVREKKADTPVIASTVGESILSSEESEELDQKTFSVC
KERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLREYTNPEHIKQWRKN
LWIFVSKFTEFDARKLHKLYKHAIKKRQENVQAVEQNTSTVNAQSAKNTDIERIKESQHD
DSSRDSSSSDRHHTSRYHEHGKERNPSDAYRKNTDSRKRPYPSFSNGKDHRERERDHYRE
RGERQDSRYYSDSKHRKLDDHRSSRDHRSDSTSKDSRTHSEHRSHSEHRSGPDYAHQKSS
RDYRYHSDWQMEHRVSGSGQRSPREQRSPYDSRSPFEYSSDHKSTPEQVWSSRKT
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atggatggacgtagtgaagatgaaagtgccagtaacagcagtggagagtcaagtaactcg
gatgatgagtcgaagtcaggatcgggatctggctccagttccagcagtagcagttccagc
agtagccaatcaggaagcagcgaatcaggaagtggctcagattctggcagccaatcagac
tctgactctgagaagtccaaggaaaagaataatcaagaaaacaaaattgatggagcagcg
ttttggaagtccaaccccagtatcctgacagtgcagaggtcggccatgctcaggaaacaa
cagttacaacaacaacagctccatcatccacctcagagctcctccaacagcggttcagat
gaggactcttctagtagtgatgactctgacgatgactcaaagagcaagagtaaagggtct
ggatcagattctgattcgggttcagactcgggttcgggaagctcatctgcctcctcagca
gaggaagggaacagtgaagagtctatgtccgactacgagcccagtctcaaagtcaagagc
aggaaacctccaaacaagtccaatgccaggaatggcaaaaaaagtaaagcttcaaagaag
cccccccgctcgtcctccgatgatgaggatgactataagaaagctctcgcaggccctcgg
cggcaggccacggtcaacgtcagctacaaagaggatgatgaactgaagaccgattcagat
gacctggtggaggtgtgtggggaggatgtgccaccaccagaggaggacgaatatgagacg
ctggagagggtgatggaaatgaggataggacagaaaggagtgacgggggctataaccaca
gtttacgctgtcgaggcagacggtgaccccaacgccaactttgaccccagcagacagtca
ggagaggtgcaatacttgattaaatggaagaactggtctcacattcacaacacctgggag
acagaggaaaccctcaagcaacaaaacgtgaagggaatgaagaaactagacaacttcaag
aaaaaagagcaagacaggaaaaaatggttaaaaaccgcttcacctgaggatgtggagtac
ctcaactgtcagcaggaattgatggatgacctgcattcacaatatcaactggtggaacga
atcatcggacattcaaaccaaaagtcggccgcaggctatccggactacctgtgtaaatgg
cagggtttgtcgtactccgagtgcagctgggaagacggagcgctcatcgcgagaaagttt
cagaagtgcattactgaatacatgagccgaaaccagtgcaaaaacattccctccagagac
tgcaaggttttaaaacagagaccacggtttgtgcccatgaagaaacagccttcctatatc
tgtgtagaaggtctggagctgcgggactatcagctggacggtttgaactggatggcgcat
tcctggtgcaaagggaacagttgtatcctagctgatgagatgggtcttggtaaaaccata
cagacgatcagcttcctcaattatctgttcaatgagcaccagctatatgggcctttcctc
ctggtagtgcctctatccacacttacatcctggcagagagagatccagctctgggcttcc
caaatgaacgttgttgtctacctcggtgacataaacagcagaaacatgatccggacacat
gaatggatgcatccgcagacgaagcgcttaaagttcaacatcctgctcactacttatgaa
attctgctcaaagataagtcatttttaggtaatgtgagctgggcgttcattggtgtagat
gaggctcatcgactgaagaatgatgactctcttctctataagaccatgatagactttaag
tctaatcacaggctgctaatcacaggcacacctctccaaaactccctgaaagagctgtgg
tcccttctgcatttcatcatgccggagaagtttcactcatgggagttgtttgaagaggaa
catggaaagggcagagactcaggctacaccagccttcataaagagctggagccctttctg
ctgcgtagagtgaagaaggatgtagagaaatctctgcccgctaaggtggagcagatcctc
agggttgagatgagcgctattcaaaaacaatactacaagtggatattgacgaggaactat
aaagctctgagtaaaggcactaagggaagcacatctggctttctgaacatcatgatggag
ctgaagaaatgctgtaaccactgctacctcatcaaaccacctgaggagaatgagttctac
aacagacaagagggactacagcacctgattcgtagcagtgggaagctggttcttttagat
aaactactggtccggttaaaggaacgaggtcaccgtgtgctcatcttctcccaaatggtt
cggatgctggacatccttgccgaatacctgaaaagcaggcagttcttgtttcagagactg
gacggttctataaagggtgagatgaggaaacaggcgctggatcattttaatgctgaaggc
tcagaggatttctgcttcctgctgtctacacgagcaggtggtctgggcattaatctggcc
tctgctgatacggtggtgatttttgactccgactggaacccgcagaatgacctacaggcc
caggccagagctcataggattggacagaagaaacaggtaaatatataccgtctagtgaca
aagggctcagttgaggaggagattattgaaagggccaagaagaaaatggtattggaccat
ctagttattcagagaatggacactacagggaagacggttctccacacgggcgctgctcct
tccagttccactccgttcaacaaggaggagctgtctgctatcctgaagtttggtgcggag
gagctctttaaagaaccggagggagaagagcaagaacctcaggagatggatattgatgaa
atcctgaaaagagcagagaccagagagaacgaccctggaccatcaactgtaggagaagag
ctcctctcacagtttaaggtggcaaacttttccatgatggacgaagaggaaattgacatg
gacacggatagaaacaataggaattgggatgatattatccctgaggagcaaaggaggaga
ctggaggaggaggagcgacagaaggagctggcagagatctatttactgccccgcatgagg
aaatgtgctaaacagatcagctttaatggaaatgagagcaggcggagtcggaacaggctc
agatactctgcttcagacagcgactcgggtactgacaggaagcggcccaagaaacgagga
agacctcgaaccattccaagagaaaacattaagggcttcactgatgctgagatacgcagg
tttatcaaaagttataagaaattcggtggccctttagaaagactcgatgctatcgcccgc
gatgccgagctggtggataaatctgagcatgatctgcggcggctggctgagactgtccac
aacggctgtctgaaaaccctgaaggagaatccctgtggaccagagagaacctcaggaggc
aggcgaggaaaggtgaaaggaccaacttttagaatctcaggggttcaggtcaatgccaaa
cttgtgatctctcatgaggaggagttggcacctctacacaaggccattcctgcagacgca
gaggagaggaagaggtatatgatcccatgccactcaaaggcagctcattttgacattgag
tggggtaaagaggatgactccagtctgctcattggcatctatgaatatggttatggtagc
tgggaaatgatcaagatggacccagatctcaacctcacacataagctccttccagacgat
cctgacaagaagccacaggccaaacagctgcagacacgagctgactacctcatcaagtta
ttgagcaaagacctggccaagaaagaagcacagaaacaggctggcagtgcaaattcacgt
aaaaggaaaccacggggaaagaaaaataaagcagtgaaaccaaaggttgatgaactgatg
aacagtttgtcctcagctcctccttcagataagagctctgaggatgaggaagaaaaagag
gatgaggaaaaggaaactgctctagtgaagctgcctagcagaagagcgcgtgtcacagag
cgagcggtcgaggaggaagaggaggaggaggaagatgagtctgaggaggaggaggagcct
gagattaaggaggaggaggaggaagaagagataaaggagaaggtggtgaaaaaagagatc
aaaaaagagaaaaaagaggagggccgtgacagcaaagaaaaagaactaaaagagaaggaa
atcaagcaagatcctgtacttgaagaagaagaagaggagactactatagaggccgtagag
gtgaaagcagaagttcgggaaaagaaggcagatactcctgtgattgcatctacagtagga
gagagtattttatcatctgaagagtctgaagaactcgaccagaagaccttcagcgtgtgt
aaggaacgcatgagaccagtaaaggcagcactaaaacagttggatcgtccagagaaaggc
ctgtctgagcgagagcagctggagcatacacgccaatgcctgatcaaaataggagatcac
attactgagtgtctcagagaatacacaaaccctgagcacatcaaacagtggaggaaaaat
ctttggatatttgtttctaaatttactgaatttgatgcaagaaaactgcataaactctat
aaacacgcaatcaagaagagacaagaaaatgttcaggcagtggaacagaacactagcact
gtaaatgcacaaagcgctaaaaatacagatatcgagcggataaaagagtcgcagcacgac
gacagcagcagagacagcagcagctctgacagacatcacacatctcgctaccacgaacac
ggcaaagaacgtaacccttcagacgcatacagaaaaaatacagactcccgaaagaggccg
tacccctccttcagcaatggcaaagaccaccgagagagagaaagagaccactacagagaa
agaggagagcgacaggacagcagatattacagtgacagcaagcaccggaagctagacgac
catcgctccagcagagatcaccgatcagacagcacttcaaaggactcgaggacgcactcc
gaacaccgctcccattccgagcaccgatccggccccgactacgctcaccaaaaatcttcc
cgggactaccgctaccattcggactggcagatggagcacagggtttcgggtagcggccag
cgctcgccccgtgaacagcgctcgccgtatgactctcgctcgcccttcgagtactcgtct
gaccacaagagcacacccgaacaggtctggagcagccgaaagacataa
DBGET
integrated database retrieval system
