Misgurnus anguillicaudatus (oriental weatherfish): 129446134
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Entry
129446134 CDS
T09481
Symbol
shha
Name
(RefSeq) sonic hedgehog protein isoform X1
KO
K11988
sonic hedgehog
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
129446134 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
manu01002
]
129446134 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
manu00536
]
129446134 (shha)
Peptidases and inhibitors [BR:
manu01002
]
Cysteine peptidases
Family C46: hedgehog family
129446134 (shha)
Glycosaminoglycan binding proteins [BR:
manu00536
]
Heparan sulfate / Heparin
Morphogens
129446134 (shha)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
DHQS
Vint
DUF7764
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
129446134
NCBI-ProteinID:
XP_055063064
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Position
1:38261006..38332578
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AA seq
418 aa
AA seq
DB search
MRLMARLVLVSFLSLSLVLSGLACGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSALVALKDGRQKAVKDLRPGDKVLAADSAGNLVYSDFIM
FTDRDTTTRRVFYVIETKDAAEKITLTAAHLLFVLDNSTDDLHTMTAAFASSVRPGQKVM
VVDDSGQLKSVIVERIYTEEQQGSFAPVTAHGTIVVDRVLASCYAVIEDHSLAHLAFAPV
RLFYDVSSFIFPKYFTSQSNATLQQEGVHWYSKRLYQLGTWLLDSHKLHPLGMSVNSS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttatggcgagactggtgctggtgtcttttctcagtctgtccttggtgctctcc
ggactggcctgtggtcctggcagaggctacggcagaagaagacatccgaagaagctgaca
cctctcgcctacaagcagtttatacctaatgtcgcggagaagaccttaggagccagcggc
agatatgagggcaagataacccgcaattcagagagatttaaagaacttactccaaattac
aatcccgacattatctttaaggatgaggagaacacaggcgcggaccgactcatgacacag
agatgcaaagataagctgaattcactggccatctctgtaatgaaccagtggccaggggtt
aagctgcgtgtaaccgaaggctgggatgaagatggtcaccattttgaggaatcactccat
tatgaaggaagagctgttgatatcactacctctgaccgagacaagagcaaatatgggact
ctctcacggttagcagtggaggccggatttgactgggtctattatgagtccaaagctcac
attcattgctctgtcaaagcagaaaactcagttgctgctaaatccggaggctgtttccca
ggttcggctttggtcgcgttgaaagacgggaggcagaaggccgtgaaggacctgagaccc
ggtgacaaggtgctggcggcggacagcgcgggaaacctcgtgtacagcgacttcatcatg
ttcacagacagagacacgacgacgcgacgtgtgttttacgtcatagaaacaaaagacgcc
gctgaaaagatcacgctcaccgcggctcaccttctttttgtcctcgacaactccacggat
gatctccacaccatgaccgccgcctttgccagctctgtcagacccggacaaaaggtgatg
gttgttgatgatagcggtcaacttaaatctgtcatcgttgagcggatatacacggaggag
cagcagggctcgttcgcaccagtgaccgcccatggaaccattgtggtcgaccgagtactg
gcgtcctgttacgcggtcattgaagatcacagtctcgcacatttggccttcgcgccagtc
aggctgttttatgacgtgtcatctttcatatttcctaaatacttcaccagtcagtccaat
gcgactttacaacaggagggagttcactggtactctaaacgcctttatcagttgggaacg
tggcttttggacagccacaagcttcatcctttggggatgtcagtaaactcaagctga
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