Misgurnus anguillicaudatus (oriental weatherfish): 129446824
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Entry
129446824 CDS
T09481
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04137
Mitophagy - animal
manu04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
129446824 (rabgef1)
04137 Mitophagy - animal
129446824 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129446824 (rabgef1)
Membrane trafficking [BR:
manu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
129446824 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
129446824 (rabgef1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
TrAA12
Syntaxin_2
Prominin
Motif
Other DBs
NCBI-GeneID:
129446824
NCBI-ProteinID:
XP_073730471
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All DBs
Position
12:complement(31529882..31539652)
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AA seq
567 aa
AA seq
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MDERPVTRNKGKTMSQRSERRGIHVDQSELLCKKGCGYYGNAAWQGLCSKCWREEYQKAR
QRQIQEDWALAEKLQREEEAAYVSIHGSSQTQPPQSHSQQSLATFSKFEEKKTNEKTRKV
TTVKKFFSPSSRTAPKKVPPEKENEKRVKEEKVQGRRESHGETLLRDLKGIFTQPWDMGS
PTEALVSRLRESHEGKTPSPSISRQSSIETDRVSRDFMEFLKTLQKPGREIHKQSRAFIE
SMGNKRDLGVEELSECVQDFYQNMSDRLMNYFKGSSEKVDRVMDQVEKYIMTRLYKSVFC
PETTDDEKKDLVTQRRIRALHWVTIQMLCVPVDEEIPEVSDSVVKAITDVIEMDSKRVPK
DKLACITSCSKHIFNAIRITKNEPASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPS
RLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSPEDFERYMSGQASPRRPDNPAGWPQTGS
NVNPVLSQIHQNLSVLSNLEKRQQQVIEEAQSLQTELAEWQDSVAREVQEILERYPLEIK
PRASAIDAENVENDKLPPPLQPQVFAG
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagaccggtgacaaggaacaaaggaaaaacaatgagtcagcgctctgagcga
cgagggatccatgtggaccaatcggaactgctttgcaagaagggatgcggttactatgga
aatgcagcctggcagggcctgtgctccaagtgctggagagaggagtaccagaaagctcgg
cagaggcagatccaagaggactgggctctggctgaaaagctacagagggaagaggaggcg
gcctatgtcagcattcatggttcctcgcaaacccagcctccgcagtcacattcccagcaa
tctctcgccaccttctccaaatttgaggagaaaaaaaccaacgagaaaactcgcaaggtc
accaccgtgaagaaattcttcagtccttcttcccgcacggccccaaaaaaagtcccccct
gaaaaagaaaacgagaaacgagtaaaagaggagaaggtgcagggcaggagggagagccat
ggagaaaccctcttaagggatctgaagggcatttttacccagccctgggacatgggctcg
cccactgaagctctggtatccagactgagagagagccacgagggaaagacaccgagtccg
tccatcagccgtcagtccagcatcgagaccgatcgtgtgtcacgagattttatggagttc
ctgaagaccctccagaaacccggcagagagattcacaagcagagccgtgctttcatagag
agcatgggaaataaaagggatctcggcgtcgaggagctctctgagtgtgttcaggacttc
taccaaaacatgtctgaccgacttatgaattatttcaaaggctcctctgaaaaggtggac
agggtgatggaccaggtggaaaaatacatcatgacccgactgtacaaaagcgtcttctgt
ccagaaactacagatgatgagaaaaaagacctggtcacccagcgcaggattcgggcctta
cactgggtaaccattcagatgctgtgtgttcctgtcgacgaggagatcccagaggtgtct
gatagtgtagtcaaagccatcacagatgttattgagatggactcgaagcgtgtgccgaag
gataaactggcatgcatcaccagttgcagtaagcatatcttcaatgccatcaggatcacc
aagaatgaaccagcttctgcagatgactttctgcctaccctcatctatatcgtgttgaag
gccaatcctcctcggttgcagtccaacatccagtacatcacacgcttctgcaatccctcg
agactcatgacaggagaggatggatactactttactaacctgtgctgtgctgtagccttt
atagagaagttggacgcccagtctttgaatcttagccctgaggactttgagcgctacatg
tctggtcaggcttcccctcgaagaccagacaatcctgcaggctggccccagaccggctct
aatgttaacccggtcctcagccagatccatcaaaatctaagcgtcctttccaaccttgaa
aaaagacagcagcaggtgatcgaggaggcacaaagcctgcagacagaacttgcagaatgg
caggacagcgtggcccgcgaagtccaggagatcttggaaagatacccactggagattaaa
cctcgggcatctgcgatagatgcggaaaacgtggaaaacgacaagttaccacccccactg
cagccgcaagtgtttgctgggtaa
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