Misgurnus anguillicaudatus (oriental weatherfish): 129446875
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Entry
129446875 CDS
T09481
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04140
Autophagy - animal
manu04148
Efferocytosis
manu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129446875 (vps11)
04148 Efferocytosis
129446875 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129446875 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129446875 (vps11)
Membrane trafficking [BR:
manu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129446875 (vps11)
Hops complex
129446875 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
TPR_Vps41
Clathrin
zf-C3HC4_2
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3H2C3
WD40_Prp19
Beta-prop_EML_2
WDR55
TPR_GEMI5
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
TPR_11
zf_RING_Vps8
Glyco_transf_10
zf_RING_Vps8_fungal
TSGP1
Motif
Other DBs
NCBI-GeneID:
129446875
NCBI-ProteinID:
XP_073730460
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All DBs
Position
12:complement(29829265..29841134)
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AA seq
927 aa
AA seq
DB search
MSAFLQWRRFAFFYKETVKDPSDNGKNFQLPMGISACDSGRGHIVLGDMDGQIWFLSRSL
QLSSFQGYKLSVTHLYQLKQHNILVSVGEDEHGINPLVKVWNLDKKDSGSPLCTRIFPAI
PGNKPTEVSCLSVHENLNFMAIGFTDGSIVLTKGDITRDRHSKTLSFHQDNSPITGLAFR
QAGKITHLFVATLDKVQCYTLSLKEVPRLELDTHGCALRCTALTDPSQDSQFIVAGDDCV
YLYQPDERGPCFAFEGHKVQAQWHRGYLLLLTKNDKSPNQSEYGSGETSPAAKHILTIYD
LDNKFIAYSAAFDDVIDILSEWGSFYVLTRDRTMYTLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDNDGLSEIFRHYGDHLYAKGDHDGAIQQYIRTIGKLEPSYVIRNFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSESEVHFDVEIAIKVLRQA
GYHSHAVFLAEKHTHHEWYLKIQLEDLKNYQEALRYIGRLPFIQAESNMKRYGKTLMHNV
PDSTTILLKRLCTDYQPNKDSADKDSLNSAAGNKANPEEFIPVFANNPRELRAFLEHMIK
VDPFSPEGVYDTLLELRLQDWAHEQNPEKKKVLQEAALSLLRSDNTVFDKALVLCQMHNF
KEGVLYLYEKGMLYQQIMHYHMQNEEYGKVVEACKHHGDKEACLWEQALGYFARKEENCK
AYISEVLQHIDQNNLMPPLLVVQTLAHNSTASLSVIKDYLINKLERETHQIEEDERKIRQ
YREETAHLRAEIQELKTCAKIFQKTKCSMCNSPLELPSVHFLCGHSFHQHCLESFAESEA
ECPTCTPENRKVMDMLRAQDQKRDLHDHFSRQLKSSNDGFSVIADYFGRGVFNKLTLITD
APGGRSGAVNLEAEFQRDLHTNTKRNV
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgttcttacagtggagacgatttgcgtttttctataaagaaaccgtaaaggat
ccgagcgacaatgggaaaaatttccaattaccgatgggcatatcggcatgcgattcaggc
cgaggacacattgtgctcggagatatggatggacagatttggtttttaagccgctctctt
cagctctccagctttcaaggttataaactgagtgtaacacacctctatcagctgaaacaa
cacaatatcctcgtgtcagttggtgaggatgagcatggcattaatcctctggtgaaagtt
tggaaccttgataagaaggacagcggcagtcctctgtgtacccgaatcttccctgccatt
cctggaaacaaacccacggaagtgtcttgtcttagtgtacatgaaaaccttaatttcatg
gccataggttttacagatggcagcattgtgctgacaaagggtgacatcaccagagacaga
cacagtaaaactcttagcttccatcaggacaactctccaatcacaggcctggcttttcgg
caagctggcaaaatcacgcacctgtttgttgcaaccttagataaagtgcagtgttacaca
ctgtcgctaaaagaggtcccacgtttagaattggacacgcatggctgcgctctccgctgc
actgcgctcacagacccatcgcaggactctcagttcatagtggccggagatgactgcgtg
tatttgtaccagccggatgaaagaggaccttgctttgctttcgaaggccataaggttcag
gctcagtggcacagaggatacctactgctgctcaccaaaaacgacaagtcacctaaccaa
tctgaatatggcagcggagagacatcacccgcagcaaagcacatccttaccatatacgac
ctggacaacaagttcattgcatatagtgctgcatttgatgatgtcattgacatcctgtct
gagtggggctcattctatgtgcttacgagagaccgaactatgtatacactgcaagaaaaa
gacacacagacaaagttagagatgctgtttaagaaaaacctgtttgtgatggctattaac
ctggctaaaagtcaacacctggacaatgatggtctgtctgagatattcaggcattacgga
gaccacctctatgccaaaggggatcatgatggagctattcaacagtatattcgcaccatt
gggaagcttgaaccctcttatgttatccgtaattttttggatgcccagaggatacataac
ttgacagcatacctacaagccctccacaggcagtccctggccaacgctgaccacactact
ctactgcttaattgctacactaaactgaaagacagctccaaactggaggagttcattaag
agcagtgagagtgaggtgcatttcgatgtcgaaatcgccatcaaggtgttgcgtcaggct
ggttatcacagtcatgctgtgttcctggcagagaaacacacgcatcatgaatggtaccta
aagattcagctggaggatttgaagaattatcaggaggcattacgctacataggcaggttg
ccatttattcaggcggagagcaacatgaagcgctatggtaaaactctaatgcacaatgta
cctgatagcaccaccatactgctaaaacgcctctgcacggactatcaacccaacaaagac
tctgccgataaggacagtctcaacagtgccgcaggaaacaaggccaatccagaggaattc
attcctgtctttgccaataacccacgggagttgcgagcgttcctggaacacatgataaag
gtggatccgttctctcccgagggagtttatgacacgctacttgagctcagactgcaggac
tgggcacacgagcagaaccccgagaagaaaaaagtcctgcaggaggcagcattgtctctg
ctgaggagtgacaacactgtgtttgacaaggccctggtcctctgccaaatgcacaacttc
aaagaaggagtgctgtatctttatgaaaagggcatgctataccagcaaatcatgcattac
cacatgcaaaacgaggagtatggaaaagttgtggaggcttgtaagcatcatggggacaag
gaggcgtgtttgtgggaacaggcgctgggctattttgcacgcaaagaagaaaactgcaaa
gcctacattagtgaagttttgcagcatattgaccaaaataacctgatgcctccactgctg
gtggtgcagactttggcccacaactccacagcctctctctcagttataaaagactacttg
ataaataaacttgagagagagacccatcagattgaagaagatgaaagaaagatccgacag
tatagagaggagacggcgcatctgcgtgctgagatccaggagctcaaaacctgtgcaaag
attttccagaagacgaagtgcagcatgtgcaacagtccactagagctgccttctgtgcac
ttcctgtgcggccactcgttccaccagcactgcttggagagcttcgctgagagcgaggcc
gaatgccccacctgcacacctgaaaacagaaaggtcatggacatgctgcgagcacaagat
cagaaacgagatcttcatgaccatttcagtagacagttaaaatcttccaatgatggcttc
tcggtgatcgctgactattttggccgtggagtgtttaacaaactcaccctgataacggat
gcaccaggaggccggagtggagctgtgaatctagaagctgaatttcaaagagatctgcac
acgaacaccaagaggaatgtttga
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