Misgurnus anguillicaudatus (oriental weatherfish): 129446889
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Entry
129446889 CDS
T09481
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc)
KO
K04646
clathrin heavy chain
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04142
Lysosome
manu04144
Endocytosis
manu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129446889 (cltca)
04142 Lysosome
129446889 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
129446889 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129446889 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
manu04147
]
129446889 (cltca)
Membrane trafficking [BR:
manu04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
129446889 (cltca)
Exosome [BR:
manu04147
]
Exosomal proteins
Proteins found in most exosomes
129446889 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
129446889
NCBI-ProteinID:
XP_055064352
LinkDB
All DBs
Position
7:complement(12891693..12938610)
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDLADPNT
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQNVVFVITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVYL
RANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRISPDQGLQFAQMLVQDE
EPLADITQIVDVFMEYNLVQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRRDPELWASVL
EESNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISSELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
VQAADQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGQEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMMS
HPSDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFISEEDYQALRASIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLQE
DKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLETSESLR
KEEEQATETQPIVYGTPQLMLTAGPSVVVPPQQPYGYGYSAAPGYTGPPQPQPGFGYGM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcccatcagattccaggagcacctgcagctccaaaacttgggaatc
aacccagcaaacatcgggttcagcaccctgacgatggagtccgataagttcatctgtgtg
cgagagaaggtcggagaacaggcccaggtggtgatcattgacctggcggacccaaacacc
cccatccgcaggcccatctctgcagacagcgccatcatgaacccagcgagcaaagtcata
gcacttaaagctgccaaaacccttcagatctttaatattgagatgaagagtaagatgaaa
gctcataccatgaccgatgatgtcactttctggaaatggatctcccttaacacggtggcc
cttgtgaccgataacgccgtctaccactggagcatggagggagactctcagccggtcaaa
gtgttcgacagacattccagcctggcaggctgtcaaatcatcaactaccgtaccgatgcc
aagcagaagtggctgctgcttatcggcatttctgcccagcaaaacagagttgttggtgcc
atgcagctgtactcggttgacaggaaggtgtcacagcctatcgagggacacgccgctggc
tttgcccagtttaaaatggagggaaatgcggaggaatccaccttgttttgttttgctgtg
cgaggccaggcaggaggaaagctacatattattgaagtgggcacaccgccgaccggcaac
cagccattcccgaagaaagccgtggatgtgttttttccccctgaagcacagaatgacttc
ccagtggccatgcagatcagctcaaaacagaatgtcgtctttgtcatcactaaatacggt
tacattcatctgtatgacctggagaccggcacctgcatctacatgaatagaataagtggc
gagaccatttttgtgactgcaccccatgaagctacatctggaatcattggagtcaatagg
aaagggcaggtgttgtctgtctgtgttgaggaagagaacatcatcccgtacatcaccaat
gtgctgcagaatccagacctggccttacggatggcagtccggaataatctggctggagcc
gaggagctgttcgcccgcaagtttaacaacctctttgctgcaggaaactactccgaggca
gctaaagtagccgctaacgctccaaagggtatcctgcgcacccctgacaccatccgccgg
ttccagagcgttccggcccagcccggccagacatccccgcttctgcagtattttgggatt
ttgttggaccagggccagctcaacaaatttgagtctctggagctgtgcagacccgtcctc
cagcagggccgcaaacaactgctagagaaatggctgaaggaggacaagctcgaatgctca
gaggaattgggggatcttgtcaaagctgtggaccccactcttgctctcagcgtctatctg
agggccaacgtaccaaacaaagtcattcagtgctttgcagaaactggacagttcccaaag
attgtactgtacgctaaaaaggtgggctacactccagattggatcttcctgctgaggaac
gtgatgcggatcagtccggatcaaggtctacagttcgctcagatgctggttcaggatgaa
gaaccgcttgctgacattacacagatcgttgacgtgtttatggaatataacctggtccag
cagtgcacatcattccttttggacgctctgaaaaacaaccggccgtcagaggggccgctg
cagacccgtctgctggagatgaacctaatgcatgcaccacaggttgctgatgccatccta
ggaaaccagatgtttactaactacgatcgtgcccacatcgcccagctgtgcgagaaagct
ggacttctgcagagagctttggaacactacaccgatctttacgacatcaagcgagctgtc
gtacacacgcacctgctcaacccagagtggttggtgaactactttggctctctgtcagtg
gaagactctctggagtgtctgagagccatgctgtctgctaacatcaggcagaaccttcag
atctgcgtccaggtggcctccaagtatcacgagcagctttctacccagtccctcaccgag
ctttttgagtcttttaagagttttgagggtctcttctatttcctcggctcgatcgtgaac
tttagccaggacccagaggtccacttcaaatacatccaggcggcgtgcaagacgggccaa
atcaaagaagtggagcggatctgtcgggaaagcaactgctacgaccctgaacgtgtcaag
aacttcctcaaggaagctaaactcaccgatcagctgcctctcatcatcgtgtgcgatcgc
tttgatttcgtccatgacctcgtgctgtacctgtaccgaaataacctacagaagtacatt
gaaatctacgtgcagaaggtaaatccaagccgtctgccggtggtgatcggaggtcttctg
gatgttgactgctccgaggacgtcatcaagaacctgatcctggtggtgcgcggtcagttt
tccaccgatgagctggtggccgaggtggagaagagaaaccgactgaagctgttgttgccc
tggctggagtctcgtatccatgagggttgtgaagagccagctacccacaatgccctggcc
aagatttacattgacagcaacaacaaccccgaacgcttcctgcgcgagaacccttactac
gacagccgcgtggtggggaagtactgcgaaaaaagagacccccatctggcctgtgtggcg
tatgagagaggacagtgcgaccaagagctcattaatgtgtgcaatgaaaactcgctgttt
aagagtttgtcacgttacctggttcgccgcagagaccctgaactctgggccagcgtgctt
gaggaatccaaccccttcaggaggcctcttattgaccaggtggtacagacagccctgtca
gagactcaggatccagaggaggtgtctgtcacagtgaaggcattcatgaccgctgaccta
cccaatgaactcattgagctgttggagaagatcgtactggataactctgtcttcagcgag
cacagaaacctgcagaatctgctcatcctcaccgcaattaaagcggaccgaacacgcgtc
atggagtacatcaaccgcctggacaactacgacgcccctgacatcgccaacattgctatc
agcagcgagctcttcgaggaggccttcgctatcttcaggaaattcgacgtcaacacatct
gcggttcaggttctgattgagcacattggtaatctggaccgggcgtacgagtttgccgag
cgctgtaatgagccggctgtgtggagtcagctggccaaggcacagctgcagaaggggttg
gtcaaagaggccattgactcctacatcaaagctgatgatccctctgcttacatggaggtg
gttcaggctgctgaccagagtggtaattgggaggacctggtgaaatttctgcaaatggcc
agaaagaaggccagagagtcatacgtggagactgagctgatctttgcactggccaaaacc
aatcgtctcgctgaactggaggagtttataaatggaccaaataacgcacacatccagcag
gttggcgatcgctgctatgatgagaagatgtatgaggcagccaagctgttgtacaacaac
gtctcaaacttcgggcgcttggcctccacgctggtccacctgggcgagtatcaggccgct
gtagacggagcacgcaaggccaacagcactcgcacttggaaggaggtgtgctttgcttgc
gtagacggtcaggagttccgattggctcagatgtgcggacttcacattgtggtccacgcc
gatgaactagaagagctcatcaactactaccaggaccgtggctatttcgaggagttgatc
accatgctggaggcggcgctggggctggaacgtgcccacatgggaatgttcacagagctg
gccatcctctactctaaatttaaaccacagaagatgagggaacacctggagctcttctgg
tccagggtcaacattccaaaggtgcttagggcagcagagcaggctcacctgtgggcggag
cttgtgttcctgtatgacaagtatgaagaatttgacaacgccatcatcaccatgatgagc
cacccgtcagacgcctggaaagaaggacagttcaaggatatcatcacgaaggtggccaat
gtggaactgtactacaaagcaatccagttttatctggagttcaagcccctgttactgaac
gacctgctcatcgttctctccccgagactggatcactcacgagccgtcaacttcttcagc
aaggttaaacagcttcctcttgtcaagccttacctgcggtcagtacaaaaccacaacaac
aagtccgtcaacgaagcacttaacaacctcttcatctcagaggaagactatcaggccctc
agagcgtctatagatgcgtacgataacttcgataacatctcactggcccagcgcctggaa
aagcacgagctgatcgagttcaggagaatcgccgcttacctcttcaagggcaacaacaga
tggaagcaaagcgtagagctgtgcaaaaaagacaaactttacaaggatgctatgcagtat
gcgtccgaatcaaaagacacggagctggcggaggaacttttgcagtggttcctccaggaa
gataagaaggagtgtttcgccgcctgcctcttcacgtgctacgacctgctcaggcccgac
gtggtgctggagacagcatggaggcacaacatcatggacttttccatgccttacttcatt
caggtgatgagggagtacctcagcaaggtggacaagctggagacttcagagtctttaagg
aaagaagaggagcaggcgacggagacgcagcccattgtttatggaacacctcagctgatg
ctcacagcaggtcccagtgtcgtcgttcccccacagcagccctacggctatggttactcg
gcagcacctggttacaccgggcctcctcagccccaacctggtttcggttatggcatgtaa
DBGET
integrated database retrieval system
