Misgurnus anguillicaudatus (oriental weatherfish): 129446950
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Entry
129446950 CDS
T09481
Symbol
scaf4a
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
manu03021
]
129446950 (scaf4a)
03041 Spliceosome [BR:
manu03041
]
129446950 (scaf4a)
Transcription machinery [BR:
manu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129446950 (scaf4a)
Spliceosome [BR:
manu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
129446950 (scaf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
ATP_sub_h
Motif
Other DBs
NCBI-GeneID:
129446950
NCBI-ProteinID:
XP_073730356
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All DBs
Position
12:complement(27144554..27156046)
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AA seq
1000 aa
AA seq
DB search
MDAVNAFNHELFSLMDTKPPISRAKMISITKSAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVVDSIVRQSRHQFGAEKDVFGPRFTKNITGTFENLCLCPTEDRSKIVRVLNLWQKN
GVFKIEVIQPLLDMAAGSSSSAEADDGPDGAAASPPSPVREQESHPVVTSNSIAAAVPQL
QNSDAFAAVAQLIQSSQGQKLQQILQNFQAPGKPQSPAVDNNRSHSHLQAQSTTAAPSTH
IHQHQHHTPQPVEKKATFDTTLLDRFDYDDEPETGEEVKKDETPSIQPNIVFPEQTAAGF
PPTNQMQHFQQHMMGVSQHQQVVMPSNGQVQGFGLMTSQPFPGMISQMGQSHPAFPPQND
NFNQLMAGHHQEIQTNSDATSSHYPDDKRSRSRSGSRSPKRRRSRSNSRGRRMRHRRSRS
RSRERRHHSPHSRSQERRDRERERERRQKGLPPVKGNTLSVCSTTLWVGQLDKRTHQQDV
ACLLEEFGQIDSINMIPPRGCAYIVMIHRQDAYRALQKLSRGPNKLNQKAIKIAWALNKG
IKAEFKQFWDVELGVTYIPWSKIKQEDLDVFREGGMLDPDSLAPEWRDSQSELEKPEESQ
NGRAEVGKMEEKPTVVPMQPQVPPVQPMGAVGVLPPGFPGHMNMPPPSFPPGVPPPPGHF
IRPGFNPMQMPPGFLPPGAMPPLGTPGPHPPTAGINMPPVGGPVEDMSSDPARINNDGTD
GNQVPPGGPPGMGMQSPPGLLGSRPGLMPLQRPPGMPPPHMQRFSIPPPRPGMPHIPPQM
MPPRGPPQMMHREPPPRGFGMPPPPHGIRGHFPPPGPPFMRPGGPRPDGPNDHEGRPFRG
ERPGLGRGREREQEWFGGRRPFGEGHGGERSEGRERFGGWHEEPDKQGGWERERERSDWR
SPERERDRARDGGEERSRRSTGSREPGTRERSTRWDKDDRLDRLGQTVEEPTEKQHQDST
NTNESNANSAKELPEAIVDSKASEPIADNESVQQTHTEES
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgtcaacgcttttaatcacgagttgttctcgttgatggacactaagcctccc
atctcgagggccaagatgatctctatcaccaaatctgctataaaagccattaaactatac
aagcatgttgtccaaattgttgaaaaattcataaagaagtgcaagcctgagtacaaagtt
ccagggctctatgtggtggattccatcgtgagacagtcaaggcatcagtttggagcggaa
aaagatgtcttcgggcccaggtttaccaaaaatattacaggaacgtttgaaaacctgtgc
ttgtgtcccactgaggatcggagtaagatagtgagagtgttgaatctgtggcagaagaat
ggagtgtttaaaatcgaggtgatccagcctctattagacatggcagctggatccagcagc
tcagctgaggcggatgacggtcctgatggagcagcagcatctccgccttctcctgtgcgg
gagcaggagtctcatcctgtggtgacgtcaaactccattgcagcagctgtgcctcaactt
cagaattcggatgcttttgcagccgttgcacagctgattcagtcctctcaaggacagaag
cttcagcagattctgcagaactttcaggctccaggaaaacctcagtctccagctgtggat
aacaacaggagtcacagtcacctgcaggctcaatcaacgaccgcagctccttccacccac
atacatcagcaccaacatcacacaccacaaccggtggagaagaaggccactttcgacacc
acacttcttgaccgatttgactatgacgatgaaccagaaactggcgaggaagtcaagaag
gatgaaacgccatccattcaacctaatatagtatttcctgagcagactgccgcaggtttt
cctccaacaaatcagatgcagcactttcaacaacacatgatgggtgtatcgcagcaccaa
caggttgttatgccttcaaatggacaggtccaagggtttggtcttatgacctcacagcct
ttcccaggcatgatatctcagatggggcagtctcacccagctttcccccctcagaacgat
aacttcaaccagctcatggctggacatcatcaggaaattcagacaaattcagatgcaact
tcgagtcattaccccgatgacaaaaggtcaagatcacgctcagggtcaaggtctcctaaa
agaagaaggtctcgttcaaattcccgcggcagacgaatgcgccatcgccgttctcgatcc
cgttcacgagagcggcggcatcattcgcctcactcacggtctcaggaaaggagagatagg
gagagagagcgagaacgacgacagaaaggtcttccgcctgtaaagggtaacactctcagt
gtgtgcagtacaaccctttgggtgggtcagctggataaaaggacgcatcagcaagacgtg
gcttgtctgctagaggagtttgggcagatagattcaattaacatgattcctcctcgtggt
tgtgcctacattgtcatgatccatcgtcaggacgcttatcgagctctgcagaagcttagc
agaggtccaaacaaacttaaccagaaagctattaagattgcctgggctctaaataagggc
attaaagcagagttcaagcagttctgggatgtggagttaggggtcacctacataccctgg
tccaaaatcaaacaggaagaccttgatgtgtttagagaaggagggatgttggatcctgat
tctcttgcaccagagtggagagactctcagagtgagctggagaaaccagaggagtcccag
aatggcagggctgaggtggggaaaatggaggagaagcctacggttgtacctatgcagcct
caggttcctccggtccagccaatgggagcagttggcgttctaccgccaggattcccagga
cacatgaatatgccacccccctcatttccaccaggggttcccccacctccgggccacttt
atacggccaggcttcaatcccatgcagatgccaccgggatttctgcctccaggtgccatg
cctccactgggcactcctggacctcatccacctacagcagggatcaacatgcctccagtt
ggcggcccagtcgaagacatgtcaagtgatccggcaagaatcaacaatgacggaacagat
ggaaatcaggtgcctcctggaggtccacccgggatgggcatgcaatcaccacctggtctt
ttaggttcaaggccaggtttaatgcctctgcagcgccccccagggatgccgcccccgcac
atgcaacgattctccattccacctcctcgacccggcatgccacacatacctccacagatg
atgccacccaggggtccacctcagatgatgcaccgtgagccaccacccagaggttttggg
atgccgccccctcctcatggcatccggggccactttcctcctcctggacctccctttatg
agacccggcggtccaagaccagatgggccaaatgaccacgagggcagaccgttcaggggc
gagcgccctgggttaggaaggggaagagagcgggaacaagagtggtttggagggcgccgt
ccattcggggagggtcacggcggggagaggtcagaaggtcgagaacgatttgggggctgg
catgaagaacctgataaacaaggcggatgggaaagagagagagaacggagtgattggagg
agtccggaacgagagagggatcgagcaagggacggtggtgaggagcggagcaggcgctcg
acagggagtagagaaccagggactcgagagagaagcacacgctgggataaagacgataga
ctcgatcgactgggtcaaactgtcgaagaacccacggagaaacaacatcaagattcaacc
aataccaatgagtccaatgcaaactctgctaaagaacttcctgaagccatagtagactca
aaagcctcagaacctatagcagataacgaatctgtccaacaaacacatacagaagagtca
taa
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