Misgurnus anguillicaudatus (oriental weatherfish): 129447131
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Entry
129447131 CDS
T09481
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129447131 (lingo1b)
Membrane trafficking [BR:
manu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
129447131 (lingo1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRRNT
LRR_RPS2
V-set
LRR_EndoS
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
129447131
NCBI-ProteinID:
XP_055064728
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Position
21:44933652..44952091
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AA seq
621 aa
AA seq
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MTFLVTIKMVAREANGHSYLMACWQPILILMLGTVLSGSTTGCPSRCECSGQERSVLCHR
RKLIGLPEGIPIETRLLDLSKNRLKAINPEEFINYPHLEELQLNENIIAVIEPGAFSNLL
GLRTLGLRNNKLKLIQLGVFTGLSNLTRLDISENKIVILLDYMFQDLYNLKELEVGDNDL
VFISHRAFHGLSSLEQLTMERCNLTSVPTEALSHLHNLLSLRLRHLNVNIIQDYSFRRLY
RLKVLEIANWPLLETLTARSLHGLNITTLSITNCNLTAVPYLAIQHLVYLRFFNLSFNPI
EVVEGNKMHNLLRLQAFHLVGGRLATIEPYSFRGLNYLRVLNVSSNSLSTLEESAFHSVG
NLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQPSCETPEFLQGKEFKDFPDVLPANYF
TCQKSKIRDHKALHKFVDEGTTVQFSCQADGDPPPVIMWQSPKKQFITTKSIGRLSVSPD
GTLEVRYAQIQDNGTYMCVAVNAGGNDTRLAHLHVHSYSPNWPHQPNKTFAFISNQPNDG
GANGTGGTDPFPFDMKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNAKPNIEIEYVP
RKIDGESSPTEGSHKISMKMI
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttctggttaccatcaaaatggtggctagagaggcaaatgggcacagctacctt
atggcatgctggcagcccattctcatcctgatgctgggtaccgtcctgtccggttccacc
accggctgcccctctcgctgcgagtgcagtggccaggagcgctcggtcttgtgccatcgg
cggaagctcatcggcctccccgagggaattcccattgagacgcgacttttggatctcagc
aagaatcgtttgaaagccatcaacccagaggagtttatcaactacccccacctggaggag
ctacaacttaatgagaacatcattgcagtcatcgaacccggagccttcagcaacctcctt
gggttaagaacactaggattacgcaacaacaagcttaagttgattcagctgggtgttttc
actggcctcagtaacctcactaggttagacattagtgagaacaagattgtcattttgttg
gactatatgtttcaagacctctacaacctaaaagagctggaggttggggataatgacctg
gtgtttatctctcacagagcctttcacggcctcagtagcctagagcagctcacaatggaa
agatgcaacctgacctctgtgccaacagaggccttaagtcatcttcacaacctgctgtcc
ctcaggttacgccatctcaacgtcaacatcattcaagactactccttcaggaggctctat
cgactcaaagtcttggagatagcaaattggcctcttttggagaccttgaccgctaggtct
ctccatggtctcaacatcacaaccttgagtatcacaaactgcaatctcactgccgtccct
tatttggccattcaacacctggtgtaccttcgctttttcaacctgtcctttaatcccatc
gaggttgtggagggcaacaaaatgcacaatttgctgaggctccaggcatttcacttggta
gggggccggctagccactattgagccttattccttcagaggactcaactaccttcgggtc
ctcaacgtatccagcaatagtctaagcactttagaggagtctgcgtttcactcagtcggc
aacctggagacgctggccctccatgacaacccacttgcatgcgactgtcgtctactctgg
gtctttcgccgccgttggagactcaatttcaaccgccagcagccatcttgtgaaacgcca
gagtttttgcagggtaaagagtttaaagactttccggacgttcttccggccaattatttc
acctgtcaaaaatcaaagatccgtgatcacaaagcacttcataagtttgtagatgagggg
accacggttcaattctcttgtcaagcagatggggacccaccacccgtgataatgtggcag
tctccgaaaaagcaattcattactactaaaagcattggccggctgtcggtgtctcctgac
ggcaccttggaggttcgatatgcccaaatacaagacaatggcacgtacatgtgtgttgcc
gtcaacgcaggcggaaatgatacacgtttggcccacctccacgttcatagctattctcca
aactggccccatcaacccaacaagacctttgccttcatttcaaaccagcccaatgatggt
ggtgcaaatgggactggtggtacagatccgtttcccttcgatatgaagactctcattatc
gccacaactatgggcttcatctcgttcctcggagtggtgcttttctgtctggtgctcctg
ttcctctggagtcgaggaaagggcaatgccaagccaaacattgagattgagtatgtgcca
cgaaaaatagacggagaaagcagcccaactgaaggatctcacaagatcagtatgaaaatg
atttaa
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