Misgurnus anguillicaudatus (oriental weatherfish): 129447305
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Entry
129447305 CDS
T09481
Symbol
trim23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
manu04121
]
129447305 (trim23)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
manu04031
]
129447305 (trim23)
Enzymes [BR:
manu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129447305 (trim23)
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129447305 (trim23)
GTP-binding proteins [BR:
manu04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
129447305 (trim23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-B_box
zf-RING_5
Gtr1_RagA
zf-RING_2
MMR_HSR1
zf-C3HC4
PVC11-like
Motif
Other DBs
NCBI-GeneID:
129447305
NCBI-ProteinID:
XP_055064952
LinkDB
All DBs
Position
12:complement(18626664..18637047)
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AA seq
579 aa
AA seq
DB search
MAASVGVNKQTSAVSMEPCVRHGRATGSNAVKVLECGVCEDVFSLQGDKVPRLLLCGHTV
CHDCLTRLPLHGRAVRCPFDRQVTELGDSGVWGLKKNFALLELLERLQNGATNQSGMSED
ALRDMGECIIRCDEDESHTASMYCTVCATHLCAECSQLTHSTRTLAKHRRVPLADKPHEK
MLCPQHQVHAIEFVCLEDGCQPGPLMCCVCKEYGKHQGHKHAVLEAEANQIRASILDMAH
CIRTFTEEVSDYSRKLVGIVQHIEGGEQIVEDSMGMSHTEHVPGTAESARSCVRAYFADL
HETLCRQEEMALSVVDAHVRERLIWLRQQQEDMTILLSQVSTACLHCERTLQQDDCRVVL
AKQEINRLLETLQKQQQQFTELADHIQLDAGIPVTFTKDNRVHIGPKMEIRVVTLGLDGA
GKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAV
VFVIDSCHRDRLMESHSELAKLLTEKELRDALLLIFANKQDVPGAVSVEEMTELLSLHKL
CCGRSWHIQGCDARSGMGLHEGLDWLSRQLVAAGVLDVA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctctgtgggtgtaaataaacagacgagcgccgtatcgatggagccgtgtgtt
agacatggccgggctaccggcagtaatgcggtaaaggtgttggagtgcggcgtatgtgaa
gatgtgttttcactacaaggtgataaagtaccgcggctgctgctgtgcggacacaccgtg
tgtcatgactgtttgacccgactgcctcttcatggccgggcggtgcgttgcccgtttgac
agacaggtcactgagctgggtgattcgggcgtttggggcttaaagaagaactttgctcta
ctggagttgcttgaacggctacagaacggtgccactaatcagtcgggcatgtcggaggac
gcccttcgagacatgggagagtgcataatccgctgtgatgaagatgagagtcataccgcc
tccatgtactgcactgtgtgtgccacgcacctgtgtgccgagtgctctcagctcacccac
tccacccgcacgctggccaaacaccgtcgtgtacccctggcagacaagcctcatgagaag
atgctctgcccacagcaccaggtgcatgccattgagtttgtctgcctggaggatggatgc
cagccagggccgctcatgtgctgtgtgtgcaaggagtatggaaaacatcaagggcataag
catgccgttctagaggccgaagccaaccagatccgagcctccatcctagacatggcacac
tgcatccgtacgttcacagaggaagtctccgactactccaggaagctggtgggcatcgtg
cagcatattgaaggaggagagcagatcgtagaagacagcatgggcatgtcccacactgaa
catgtgccaggaacagcggaaagtgcccgatcctgtgtccgtgcctactttgccgatctg
cacgagactctgtgccgccaggaagaaatggctctaagtgttgtggatgctcatgttcgt
gagaggctaatctggcttcgacaacagcaggaggacatgaccatcttactgtcgcaggtg
tctacagcctgtctgcactgcgagaggacactgcaacaggatgattgcagggtggttttg
gcaaagcaggagatcaacaggctactagagacactacagaaacaacagcagcagtttaca
gaactagccgatcacattcaactggatgcaggcatccctgttactttcacaaaggataac
cgtgtacacatcggcccaaagatggagatccgggttgtcactctgggcttagatggggct
ggcaaaacaactattctctttaaactgaagcaagatgagtttatgcagcccataccaacc
ataggtttcaatgtagaaaccgttgaatacaagaatctgaagttcaccatttgggatgtg
ggtggcaagcataaactccggccactgtggaaacactactatctcaacacacaagcggtg
gtgtttgtgattgacagctgtcatagagatcggctgatggagtctcacagcgagctggcc
aagctgctaacagagaaagagctcagggatgctctgctgctcatcttcgccaacaaacag
gacgtccccggtgccgtgtccgtagaggagatgactgaactcctgagcttacacaaactg
tgctgcggccgcagctggcacatccagggctgcgacgcccgcagcggcatgggtctgcac
gaggggctggactggctctcgcgccagctggtggccgctggggttttggatgtggcctga
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