Misgurnus anguillicaudatus (oriental weatherfish): 129447321
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Entry
129447321 CDS
T09481
Symbol
rc3h2
Name
(RefSeq) roquin-2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manu03000
]
129447321 (rc3h2)
04121 Ubiquitin system [BR:
manu04121
]
129447321 (rc3h2)
Transcription factors [BR:
manu03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
129447321 (rc3h2)
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129447321 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf_CCCH_4
Prok-RING_4
zf-CCCH_UNK
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
129447321
NCBI-ProteinID:
XP_055064974
LinkDB
All DBs
Position
12:17375727..17408852
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AA seq
1024 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDGNNNKPISLGCSHTVCKTCLHKLHRKACPFDQTAISTD
IDVLPVNCALLQLVGVPVPEGEVVNVGSDEDTRHYEVCRMCVEELALYLKPISGGKGVVA
LSQSALSRPMQRKLVTLVNCQLVEEEGRMRAIRACRSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLMHKSHMQSIIDKLQSPESFAKSVQEITIILQRTGDPANLNNLRVPLELLAAI
DHNPDAAAPSWGELESVLLAVKVIVHGLVEFIQNFSKKNHESSQAQPNSKYKTSMCRDLR
QQGGCPRGASCTFAHTQEELEKYRMRNRKVSGVVRPFLSVSTVMPKADIKGSEVKTYEET
PTSEESSITQLIPRGGDHPKEALPATSQEQEFLCSSRTSSVLSVDERCGPHEHRSVLTRA
HPEIYYSQDLRSPYDLPPYHQTTIPHHKSCNTRFLRSSNVPESTLPPSVGPLYPDQHPSI
PHADRLGPTAYGPPSTYAMSQGMYTPVYDSRRGWRPPLHPREGGRSNSLPLEAFHSSVYQ
PPLRERYNSLDSPYRTMEQRAAMHRDSLARVPLGYDELLHRHKQEQWAHHHGNMSRPSQS
SPVFTVDLCPEHPEGVGGGCSACKCHGGEDSLAHYSPWSCGTISPFESEPYHLTTHSCSK
QAEEEGGGKQWLHMFEPYRRLKDEDPIIPFGEGPIISKWGAISRASRTGYQTTDPIQATA
SQGSASTTSVNFRDYTSHIHNDLRWGPRGSDSSSHSSFLENDQMPASGLHVRCNSFSSVS
KQTSDLLGKDEADSEPDRDIELELSALDMEDIETQDSKPEESCDTLSSQNSHLSTAFSDP
AAMSQLDSHLPDRMDAQLMKKMAFRKTFSPGGLSMGKIPLSMCSPIPGETPRPGPGPEVL
LNGN
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcaagcagcgcaatggactgagtttctgtcctgccccatctgctacaatgag
tttgacggcaacaacaacaagcccatcagcctgggctgctcgcacaccgtctgcaagacc
tgcctgcacaaactgcaccgcaaggcctgcccttttgaccagacggccatcagcactgac
atagacgtgctgcctgtcaactgtgccctactgcagttggtgggagtgccggttccagag
ggagaggttgtaaatgtgggcagcgatgaagacacgagacattacgaagtgtgcaggatg
tgtgtggaggagctggcgctgtatctcaaacccataagcggaggaaaaggtgtggttgca
ctcagtcaaagcgctctcagtagacccatgcaaaggaagctggtgactcttgtgaactgt
cagctggtcgaggaagaggggcgaatgcgggcgattcgggcgtgcagatctttgggcgag
cgcacggtcactgaactgatcctacagcaccagaacccgcagcagctctcggccaacctg
tgggctgcagtgcgggcacgcgggtgtcagtttcttggacccgccatgcaggaggacgct
ttgaaactggtgctgctggccctggaggacggctcggctctatcgcgaaaggttctggtg
ctgttcgtggtgcagaaactggaggcgcgtttccctcaggcatctaagaccagcatcggt
catgtagttcagctgctgtatcgcgcctcctgctttaaggtgacaaaacgtgatgaagac
tcctccctcatgcagctaaaggaggagtttcgcacttacgaagcgctccggcgtgaacac
gatgctcagatcgttcacatcgccatggaagcgggattacgtatctcacccgagcagtgg
tcctctctgctttacggagacctcatgcacaaatctcatatgcagtcaatcatagacaag
ctccaatctccagaatcatttgctaagagcgtgcaggagatcaccataatcctgcagaga
acaggagacccagccaacctcaacaaccttagggttcctctggagctgctagccgccatc
gaccacaaccctgatgcggctgctccgtcctggggagaactggagagcgtgttattggcc
gtaaaggtgattgtccacgggctggtggaattcatccaaaactttagcaaaaagaaccat
gaaagttctcaggctcaaccaaacagcaagtacaagaccagtatgtgcagagacttaagg
cagcaaggcggctgtccaagaggagccagttgcacgtttgctcacacacaggaggagctg
gagaagtacagaatgaggaataggaaagtcagtggggtggttagacccttcctgtcagtt
tcaacagtaatgcccaaagcggatattaaagggtcagaagtaaagacctatgaggagaca
ccgacctcagaggaatcatctatcacccagctcatcccaagaggaggagaccatccaaaa
gaagcattgcctgctaccagccaagaacaggaatttctttgttcttccagaacatcttcg
gtattgtctgtagatgaaagatgcggtcctcacgaacacaggtctgttctcacaagagct
catcctgaaatttactactctcaggacctgagatcaccgtatgacctcccaccctaccac
caaactaccattcctcatcacaagtcatgcaacactcgttttcttcgatccagcaatgtc
ccagagtccacgttacccccttcagtgggccccctgtacccagatcagcatccctctatc
cctcatgcagacagattgggtcccaccgcttatggtccaccctctacctacgctatgtcc
caaggcatgtacactcccgtctatgacagcagacgcggatggaggccaccgcttcatcca
agggagggcggacggagcaactcgctccctttggaagctttccattcctccgtttaccag
ccgccactccgggagcgctacaactcgctggacagcccatatcgcaccatggaacaacgg
gcagcgatgcacagggactcgttggcccgtgttccactcggctatgacgaactcctgcat
cgccacaaacaggaacagtgggcacatcaccacggcaacatgagcagaccttcccaatca
tcacctgtttttactgtggatttgtgtccagagcatcctgagggtgtgggtggtgggtgt
tcggcttgtaagtgtcacggtggagaagacagtcttgcccactactctccctggtcgtgc
ggcactatcagccctttcgagtcagagccctaccatttgacaacacactcctgttccaaa
caggcagaagaggagggtggtggcaaacaatggctccacatgtttgagccctacaggcga
ctgaaagatgaagatcctatcattcctttcggagaggggcccatcatctccaaatgggga
gccatatctagagcctctcgtactggctatcaaaccactgacccgatccaagccactgcc
tcacaggggagcgccagtaccacgtcagtcaatttcagagactacacctctcatattcat
aatgacctcagatggggtccacgcggatctgattcctcaagtcactccagctttctagag
aacgatcagatgccggcgtcaggcctgcatgtcagatgtaattctttcagcagcgtgtca
aagcagacctcggatctgctgggaaaagacgaggcagacagcgagccagacagagacatt
gagctggagctctccgctctggacatggaggacattgagacacaggacagcaaacctgag
gagtcttgtgacacgctgagttcccagaacagtcacctctctacggcctttagcgatcca
gcggcaatgtcccagctggacagccatttgcctgacagaatggatgcacagcttatgaag
aagatggcattcaggaagaccttctctccgggaggtcttagtatgggaaagataccactg
agcatgtgctcacccatacctggagaaaccccacgacccggtccaggacctgaggtgctg
ctaaacgggaactaa
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