Misgurnus anguillicaudatus (oriental weatherfish): 129447402
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Entry
129447402 CDS
T09481
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129447402 (vldlr)
Membrane trafficking [BR:
manu04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
129447402 (vldlr)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Motif
Other DBs
NCBI-GeneID:
129447402
NCBI-ProteinID:
XP_055065097
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All DBs
Position
7:27771116..27946488
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AA seq
878 aa
AA seq
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MVTSTLWLFILPVCLQLCALSRASRIECEQSQFQCGNGRCIPSVWKCDGDQDCLDGSDET
SCVRKTCAEVDFVCHSGQCVPKRWQCDGEPDCEDGSDESIEMCHMRTCRGNEFSCGVGST
QCIPVFWKCDGEKDCDNGEDEINCGNITCAPLEFTCASGRCVSRNFVCNGEDDCGDGSDE
QGCAPSSCGPNEIPCGNNTCIPRTWLCDDDVDCPDQSDESPEHCGHNPTPPAKCSSSEMQ
CGSGECIHRKWRCDGDPDCKDGSDEKNCSVRTCRPDQFKCDDGSCIHGSRQCNGFRDCGD
GTDEANCKNVTQCNGPDMFKCRSGECIEMSKVCNKARDCPDWSDEPIKECNMNECLLNNG
GCSHICSDITIGYECDCPPGLQLIDRKTCGDVNECLNPGICSQICINLKGGYKCECHNGY
QMDPTTGVCKAVGKEPCLIFTNRRDIRRLGLERREYTQIVEQLRNTVALDADFTQQKIFW
ADLGQKAIFSTVLEKQENGASHTKVIDNVNMPVGIAVDWIYKNIYWSDLGSKSIAVANFN
GTKRKVLFDSGLKEPASIAVDPLSGFLFWSDWGEPAKIEKSGLNGVDRQVLVERDIQWPN
GITLDLIKGRLYWVDSKLHMLCSVDLNGDNRQKVLQSPYYLAHPLALTVFEDRVFWTDGE
NEAIYGANKFTGSDVTMLASNLNEPQDIIAYHELIQLSGTNWCNEKVENGGCSFMCLPAP
QINKHSPKYTCVCPQGQILAPDELRCRPEAPTAAPQDRSRVTPHPIHPRGSTELKVATET
VNTEGNISTSIHEVSSSAKGSAAAWAILPVLLLAMAATGGYLMWRNWQIKNKKSMNFDNP
VYLKTTEEDLSIDISRHSASVGHTYPAISVVNTEDDLS
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtctacactatggcttttcatcctaccagtatgtcttcagctttgtgcactt
tcccgcgcttcccgaatagaatgtgagcagtcccagtttcagtgtggaaatggtcggtgt
attccatctgtgtggaagtgtgatggtgaccaggactgcttagatggcagtgacgagact
tcctgcgtgaggaagacctgtgcagaagtggactttgtctgtcacagtggtcagtgtgtt
cccaagagatggcagtgcgatggtgagccagactgtgaggatggctcagacgaaagcatt
gagatgtgccacatgagaacctgtcgagggaatgagtttagttgtggtgttggttctaca
cagtgcattccggtcttctggaagtgtgatggtgaaaaagattgtgataacggggaagac
gagataaattgtggtaacattacatgtgcccctctggagttcacctgtgccagtggtcgt
tgtgtgtctcgtaattttgtctgcaatggtgaggatgactgtggcgatggtagtgacgag
cagggctgtgctccatcctcctgtggtcctaatgaaattccctgtgggaacaacacatgc
attcctaggacttggttatgcgatgatgatgtggactgcccagaccaatcggatgagtca
cctgagcattgtggccacaacccgaccccaccggcgaagtgttcatccagtgagatgcag
tgtggttctggggaatgcatccacagaaagtggcgctgcgatggtgacccagactgcaaa
gatggcagcgatgagaaaaactgttctgtccgtacctgcaggcctgaccagttcaaatgt
gatgacggcagctgtattcatggcagcaggcagtgcaatgggttccgagattgtggagat
ggtacagatgaagccaactgcaagaatgtaacccagtgtaacggccctgacatgttcaaa
tgtcgcagtggagaatgcattgagatgagtaaagtgtgtaataaggcccgtgactgccct
gactggagtgatgaacccatcaaagagtgcaatatgaatgaatgcctgctgaacaatgga
ggctgctcacacatctgcagcgatataacaatcggctatgagtgtgactgcccaccggga
ctccagctcattgatcgcaagacctgcggtgatgtcaatgagtgtctaaaccctggtata
tgtagtcagatctgtataaatcttaagggaggctacaaatgtgaatgtcacaatggctac
cagatggatcccaccactggagtgtgcaaagctgtaggtaaagagccctgtcttattttc
accaatcgaagagacattcgcagactgggtcttgagagacgtgaatacactcagattgta
gagcagctgcggaacactgtggcactggatgctgacttcactcagcagaagatattttgg
gctgatctgggacaaaaagcaattttcagcacagtattggagaagcaggaaaatggagca
agtcataccaaggtgattgacaatgttaacatgcctgttggaatagcagtggactggatt
tacaaaaacatctactggtcagacctgggcagtaagagcattgccgtggccaacttcaat
gggaccaagaggaaggtgctgtttgacagtggtttaaaggaaccagcctctattgctgta
gatcctctatcagggtttctgttttggtcggactggggtgaaccagctaagattgaaaag
tctggattaaatggagttgacagacaggtcctggttgagagggacattcagtggcccaat
ggaatcactctggatctgatcaagggtagactctactgggtggactctaagctgcacatg
ctctgtagtgtagacctgaacggagacaaccgccagaaagtgctgcagtctccatattac
cttgcccacccattggctctgacagtttttgaggatcgagtattctggacagatggggaa
aatgaggccatctatggggcaaacaagtttacaggttctgatgtaaccatgctggccagt
aaccttaacgagccacaggacatcattgcgtaccatgagcttattcagctgtctgggaca
aattggtgcaatgagaaggtggagaatggaggctgttctttcatgtgtctgccagctcca
cagattaataaacactccccaaaatacacctgtgtgtgtccacaaggtcagatactcgct
ccagacgaactgcgttgcagaccagaggctcctactgctgctcctcaagatagaagcagg
gtgacacctcaccccattcaccctcgagggtctacagaactgaaggttgccactgaaaca
gttaatactgaaggaaatataagtacctctatacatgaagtcagttcatcagccaaaggt
tctgctgcagcctgggccattcttcctgtgttgttgttggccatggctgctacaggtggt
tacttgatgtggcgcaactggcagatcaaaaacaagaagagcatgaactttgataatcca
gtgtacctcaagaccacagaagaagacctcagtattgatattagtagacactctgcttct
gttggccacacataccctgcaatttccgtggtaaacacagaagatgacttgtcataa
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