Misgurnus anguillicaudatus (oriental weatherfish): 129447676
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Entry
129447676 CDS
T09481
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
manu03016
]
129447676 (cdkal1)
Enzymes [BR:
manu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
129447676 (cdkal1)
Transfer RNA biogenesis [BR:
manu03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
129447676 (cdkal1)
Prokaryotic type
Methylthiotransferases
129447676 (cdkal1)
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
Motif
Other DBs
NCBI-GeneID:
129447676
NCBI-ProteinID:
XP_055065396
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All DBs
Position
10:complement(9776775..10232641)
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AA seq
562 aa
AA seq
DB search
MPSACESLVDDIEDMVSSNEPTPHERQFARKSIVPRARKLKQQAAGEELQADSVIPGTQK
VWVRTWGCSHNNSDGEYMAGQLAASGYKITENPSDADLWLLNSCTVKNPAEDHFRNSIKK
AQEQDKKVVVAGCVPQAQPRMDYLKNLSIIGVQQIDRVVEVVDEAIKGHSVRLLGQKKEK
GKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYSIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPSLLWELVKEIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHVPVQSASDSVLMDMRREYCCADFNRVVDFLKEKVPGITIATDIICG
FPGETDEDFEQTMDLVRQYRFPSLFINQFYPRPGTPAAKMEQVPAQVKKQRTKELSALFH
SYNPYDHKVGERQHVLVTEESFDSQYYVAHNKFYEQVLVPKKSEFKGKMIEVDIYEAGKH
YMKGRPVDDAQVFTPSIAQPLQKGQVSGLSQELMMTHQNGHHVPVGSSTGLSWRSEGAGL
KLLLLGLAIAAIILALVIEKFH
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctgcttgtgagtctcttgttgatgatattgaggacatggtctcctcaaacgag
cccactcctcatgagcgccagtttgccaggaaaagcattgtgcctcgtgcacgaaaacta
aagcaacaagctgcaggtgaagagctacaggcagacagcgttattccaggcacacagaag
gtctgggtgaggacgtggggctgctctcacaacaattcagatggagaatacatggcggga
cagttagctgccagtggctataagataacagagaatccatctgatgctgatctgtggttg
ctgaacagttgcacagtaaagaacccagcagaagatcacttcaggaactccatcaaaaag
gcacaagagcaagataagaaggtggttgtagcaggatgtgtgccacaggcacagccaagg
atggattacctcaaaaatctgagcatcattggggttcaacagattgacagagtggtagag
gttgtggatgaggctataaaaggtcattctgtccgtctgctgggtcagaagaaggagaaa
ggcaagcgtctgggaggggcacgcttggatttgccaaagattaggaagaacccactgatt
gaaatcatttccatcaatactggttgtttaaatgcctgcacatactgcaagaccaaacac
gccagaggcgatctggccagttactctatagaggagctcgttgagagagccagacagtcc
ttccaggagggtgtttgtgagatctggttgaccagcgaggacactggagcgtacggcaga
gatatcggcaccgatttgccatcgctgctctgggaactggtgaaggaaataccagagggt
gcaatgcttcgcctgggcatgaccaacccaccatatatcctggaacatctggaggaaatg
gcaaaaatcctgaaccacccacgagtctacgccttcctccacgtgcccgtccaatcagcg
tccgacagcgttctaatggacatgaggagagagtattgctgtgctgactttaatcgggtc
gtagacttcctaaaagagaaggttccaggcatcaccattgccacggacatcatctgcggg
ttcccaggggaaacagacgaggactttgaacagacgatggatctggtgaggcagtaccgc
tttcccagcctcttcatcaaccagttttacccaagaccaggaactccggctgccaaaatg
gagcaggttccagcacaagtgaaaaaacaaagaaccaaagagctctctgcacttttccac
tcgtacaacccttacgaccacaaggttggagaaagacagcatgtgctggtgaccgaagaa
tcctttgattcccagtattacgttgcccacaacaagttttatgaacaggtgctggtgcca
aagaagtctgagttcaaagggaagatgattgaggtggacatctatgaggctgggaaacac
tacatgaagggccgtcctgtggatgatgctcaggtcttcacaccttccattgctcagcct
cttcagaagggacaggtgtctggactctctcaggagctaatgatgacccatcagaatggc
caccacgtcccggtgggttcctctacgggtctgtcatggagatcggagggtgctggactt
aaactgcttttattgggactggctatagctgccataatattggctttagtgattgaaaag
tttcactaa
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